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Warning: model %s has zero match emissions in segment %d! @@?>z8?ACDEFGHIKLMNPQRSTVWYModel name : %s Length : %d NODE %d Transitions: D%d->D%d = %.3f M%d->D%d = %.3f I%d->D%d = %.3f D%d->M%d = %.3f M%d->M%d = %.3f I%d->M%d = %.3f D%d->I%d = %.3f M%d->I%d = %.3f I%d->I%d = %.3f S(B->M%d) = %.3f S(M%d->E) = %.3f Match emissions: %c = %.3f Insert emissions: bin005r Error opening file '%s'bin004Sorry, the file '%s' was generated by a version of PRC compiled with a different PROF_HMM_TRANS setting! Sorry, the file '%s' is not in the bin004 or bin005 formats!Begin Error reading '%s': unexpected end of file TYPE%fError parsing record %d, node %d in file '%s'!The model in file '%s' is too long! Please reset MAX_PROF_HMM_LENGTH in prc.h (currently %d) and recompile ...%sError parsing node number, node %d in file '%s'!ENDMODEL%dHMMER2.0The file '%s' is not in the HMMER2.0 format!ACC NAME Strange ACC line in file '%s', please correct it!Strange NAME line in file '%s', please correct it!LENG LENG record < 0 in file '%s', please correct it!NULE Error parsing NULE score number %d in file '%s'!HMM No LENG record in file '%s', please add it!No NULE record in file '%s', please add it! Error parsing B->D score in file %s!Error parsing match emmision score %d, segment %i in file '%s'!Error parsing insert emmision score %d, segment %i in file '%s'!Error parsing transition score %d, segment %i in file '%s'!//Error parsing file '%s': '//' line seems missing!@@@?     Warning: All probabilities in '%s' are zero! (I can handle it, but it's dodgy -- double-check the file.) = w?u< ף<33>ff&?>Y?L= ;, Error parsing file '%s': The sequence %s is too long! The limit is %d amino-acids.Error parsing file '%s': Strange character '%c' at position %d in sequence %s!Warning parsing file '%s': Strange amino-acid '%c' at position %d in sequence %s! Setting emissions to null probabilities ... .prc.mod.hmm.fa.pbla.psi.psiblast.prof.profileFile '%s' has an unknown extension! Known extensions: .prc : binary PRC formats - preferred format .mod : ASCII SAM3 models (one model per file) .hmm : ASCII HMMER2 models (one model per file) .fa : single-sequence FASTA files .profile : binary PSI-BLAST profiles ("checkpoint files") (also: .prof .pbla .psi .psiblast) @@@%s%s %sCopyright (C) 2002-5 Martin Madera and MRC LMB, Cambridge, UK %sFreely distributed under the GNU General Public License %s %s (To see the help message, run the program with no arguments.) Sep 16 2005PLAN9CONVERT-TO-PRC 1.5.3 (%s), compiled on %s-human-h--helpError: Unknown option '%s'!Error: Incorrect number of arguments!w Error opening file '%s'convert_to_prc.c ERROR ON LINE %d OF FILE %s, EXITING! @  Usage: convert_to_prc [-human] [] Recognized input file extensions: .prc : binary PRC formats - preferred format .mod : ASCII SAM3 models (one model per file) .hmm : ASCII HMMER2 models (one model per file) .fa : single-sequence FASTA files .profile : binary PSI-BLAST profiles ("checkpoint files") (also: .prof .pbla .psi .psiblast) The default output format is the current PRC binary format. When the '-human' option is used, the output will be a human-readable ASCII format similar to SAM. The '-human' format cannot be read by PRC, but it may be useful for debugging and experimentation. When no output file is specified, the output is to STDOUT. 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