Select to display Genome
No Yes  
Anopheles gambiae 55 (pseudogenes) - African malaria mosquito
No Yes  
Homo sapiens 76_38 - Human
No Yes  
Pan troglodytes 76_2.1.4 - Chimpanzee
No Yes  
Gorilla gorilla 76_3.1 - Western gorilla
No Yes  
Pongo abelii 76_2 - Sumatran orangutan
No Yes  
Tarsius syrichta 76_1
No Yes  
Nomascus leucogenys 76_1.0 - Northern white-cheeked gibbon
No Yes  
Papio anubis 76 - Olive baboon
No Yes  
Macaca mulatta 76_1 - Rhesus monkey
No Yes  
Callithrix jacchus 76_3.2.1 - White-tufted-ear marmoset
No Yes  
Otolemur garnettii 76_3 - Small-eared galago
No Yes  
Microcebus murinus 76_1 - Gray mouse lemur
No Yes  
Physcomitrella patens subsp. patens 22
No Yes  
Rattus norvegicus 76_5.0 - Norway rat
No Yes  
Mus musculus 76_38 - House mouse
No Yes  
Dipodomys ordii 76_1 - Ord's kangaroo rat
No Yes  
Ictidomys tridecemlineatus 76_2 - Thirteen-lined ground squirrel
No Yes  
Heterocephalus glaber v1.7-2 - Naked mole-rat
No Yes  
Cavia porcellus 76_3 - Domestic guinea pig
No Yes  
Oryctolagus cuniculus 76_2 - Rabbit
No Yes  
Ochotona princeps 76 - American pika
No Yes  
Tupaia belangeri 76 - Northern tree shrew
No Yes  
Sus scrofa 76_10.2 - Pig
No Yes  
Bos taurus 76_3.1 - Cattle
No Yes  
Ovis aries 76_3.1 - Sheep
No Yes  
Vicugna pacos 76_1 - Alpaca
No Yes  
Tursiops truncatus 76_1 - Bottlenose dolphin
No Yes  
Mustela putorius furo 76_1.0 - Domestic ferret
No Yes  
Ailuropoda melanoleuca 76_1 - Giant panda
No Yes  
Canis familiaris 76_3.1 - Dog
No Yes  
Felis catus 76_6.2 - Domestic cat
No Yes  
Equus caballus 76_2 - Horse
No Yes  
Myotis lucifugus 76_2.0 - Little brown bat
No Yes  
Pteropus vampyrus 76_1 - Large flying fox
No Yes  
Sorex araneus 76_1 - European shrew
No Yes  
Erinaceus europaeus 76 - Western European hedgehog
No Yes  
Procavia capensis 76_1 - Cape rock hyrax
No Yes  
Loxodonta africana 76_3 - African savanna elephant
No Yes  
Echinops telfairi 76 - Small Madagascar hedgehog
No Yes  
Dasypus novemcinctus 76_2 - Nine-banded armadillo
No Yes  
Choloepus hoffmanni 76_1 - Hoffmann's two-fingered sloth
No Yes  
Macropus eugenii 76_1.0 - Tammar wallaby
No Yes  
Sarcophilus harrisii 76_7.0 - Tasmanian devil
No Yes  
Monodelphis domestica 76_5 - Gray short-tailed opossum
No Yes  
Ornithorhynchus anatinus 76_5 - Platypus
No Yes  
Saccoglossus kowalevskii v3.0
No Yes  
Petromyzon marinus 76_7.0 - Sea lamprey
No Yes  
Meleagris gallopavo 76_2 - Turkey
No Yes  
Gallus gallus 76_4 - Chicken
No Yes  
Anas platyrhynchos 76_1.0 - Mallard
No Yes  
Taeniopygia guttata 76_3.2.4 - Zebra finch
No Yes  
Ficedula albicollis 76_1.0 - Collared flycatcher
No Yes  
Pelodiscus sinensis 76_1.0 - Chinese soft-shelled turtle
No Yes  
Anolis carolinensis 76_2.0 - Green anole
No Yes  
Xenopus laevis - African clawed frog
No Yes  
Xenopus tropicalis 76_4.2 - Tropical clawed frog
No Yes  
Latimeria chalumnae 76_1 - Coelacanth
No Yes  
Lepisosteus oculatus 76 - Spotted gar
No Yes  
Gadus morhua 76_1 - Atlantic cod
No Yes  
Tetraodon nigroviridis 76_8 - Spotted green pufferfish
No Yes  
Takifugu rubripes 76_4 - Torafugu
No Yes  
Gasterosteus aculeatus 76_1 - Three-spined stickleback
No Yes  
Oryzias latipes 76_1 - Japanese medaka
No Yes  
Xiphophorus maculatus 76_4.4.2 - Southern platyfish
No Yes  
Poecilia formosa 76 - Amazon molly
No Yes  
Oreochromis niloticus 76_1.0 - Nile tilapia
No Yes  
Astyanax mexicanus 76 - Mexican tetra
No Yes  
Danio rerio 76_9 - Zebrafish
No Yes  
Ciona savignyi 76_2.0 - Pacific transparent sea squirt
No Yes  
Ciona intestinalis 76 - Vase tunicate
No Yes  
Strongylocentrotus purpuratus v3.1 - Purple sea urchin
No Yes  
Octopus bimaculoides 280
No Yes  
Crassostrea gigas 22 - Pacific oyster
No Yes  
Lottia gigantea - Owl limpet
No Yes  
Helobdella robusta
No Yes  
Capitella sp. I
No Yes  
Danaus plexippus OGS1.0 - Monarch butterfly
No Yes  
Heliconius melpomene - Postman butterfly
No Yes  
Bombyx mori - Domestic silkworm
No Yes  
Nasonia vitripennis - Jewel wasp
No Yes  
Apis mellifera 38.2d - Honey bee
No Yes  
Harpegnathos saltator v3.3 - Jerdon's jumping ant
No Yes  
Linepithema humile v1.1 - Argentine ant
No Yes  
Pogonomyrmex barbatus v1.2 - Red harvester ant
No Yes  
Solenopsis invicta v.2.2.3 - Red fire ant
No Yes  
Acromyrmex echinatior v3.8 - Panamanian leafcutter ant
No Yes  
Atta cephalotes v1.1
No Yes  
Camponotus floridanus v3.3 - Florida carpenter ant
No Yes  
Lucilia cuprina - Australian sheep blowfly
No Yes  
Drosophila grimshawi 1.3
No Yes  
Drosophila willistoni 1.3
No Yes  
Drosophila pseudoobscura 2.13
No Yes  
Drosophila persimilis 1.3
No Yes  
Drosophila suzukii
No Yes  
Drosophila yakuba 1.3
No Yes  
Drosophila simulans 1.3
No Yes  
Drosophila sechellia 1.3
No Yes  
Drosophila melanogaster 76_5 - Fruit fly
No Yes  
Drosophila erecta 1.3
No Yes  
Drosophila ananassae 1.3
No Yes  
Drosophila virilis 1.2
No Yes  
Drosophila mojavensis 1.3
No Yes  
Megaselia scalaris 22
No Yes  
Aedes aegypti 55 - Yellow fever mosquito
No Yes  
Culex pipiens quinquefasciatus - Southern house mosquito
No Yes  
Anopheles darlingi 22 - American malaria mosquito
No Yes  
Anopheles gambiae 49_3j - African malaria mosquito
No Yes  
Tribolium castaneum 3.0 - Red flour beetle
No Yes  
Pediculus humanus corporis - Human body louse
No Yes  
Acyrthosiphon pisum - Pea aphid
No Yes  
Rhodnius prolixus 22
No Yes  
Daphnia pulex - Common water flea
No Yes  
Strigamia maritima 22
No Yes  
Tetranychus urticae - Two-spotted spider mite
No Yes  
Pristionchus pacificus
No Yes  
Meloidogyne incognita - Southern root-knot nematode
No Yes  
Meloidogyne hapla
No Yes  
Onchocerca volvulus 22
No Yes  
Brugia malayi WS250 - Agent of lymphatic filariasis
No Yes  
Caenorhabditis japonica
No Yes  
Caenorhabditis brenneri
No Yes  
Caenorhabditis remanei
No Yes  
Caenorhabditis elegans 76_235 - Roundworm
No Yes  
Caenorhabditis briggsae 2
No Yes  
Trichinella spiralis 22
No Yes  
Schistosoma mansoni
No Yes  
Mnemiopsis leidyi - Sea walnut
No Yes  
Acropora digitifera v1.0
No Yes  
Nematostella vectensis 1.0 - Starlet sea anemone
No Yes  
Hydra vulgaris
No Yes  
Amphimedon queenslandica
No Yes  
Proterospongia sp. ATCC 50818
No Yes  
Monosiga brevicollis
No Yes  
Sphaeroforma arctica JP610
No Yes  
Conidiobolus coronatus NRRL28638 v1.0
No Yes  
Mortierella verticillata NRRL 6337
No Yes  
Sporisorium reilianum 22
No Yes  
Ustilago maydis
No Yes  
Cronartium quercuum f. sp. fusiforme G11 v1.0
No Yes  
Puccinia graminis f. sp. tritici CRL 75-36-700-3
No Yes  
Melampsora laricis-populina
No Yes  
Wallemia sebi v1.0
No Yes  
Sphaerobolus stellatus v1.0
No Yes  
Piloderma croceum F 1598 v1.0
No Yes  
Serpula lacrymans var. lacrymans S7.9
No Yes  
Coniophora puteana
No Yes  
Hydnomerulius pinastri v2.0
No Yes  
Paxillus rubicundulus Ve08.2h10 v1.0
No Yes  
Pisolithus microcarpus 441 v1.0
No Yes  
Pisolithus tinctorius Marx 270 v1.0
No Yes  
Scleroderma citrinum Foug A v1.0
No Yes  
Coprinopsis cinerea okayama7 130 v3
No Yes  
Pleurotus ostreatus - Oyster mushroom
No Yes  
Amanita thiersii Skay4041 v1.0
No Yes  
Amanita muscaria Koide v1.0 - Fly agaric
No Yes  
Galerina marginata v1.0
No Yes  
Hebeloma cylindrosporum h7 v2.0
No Yes  
Laccaria bicolor S238N-H82
No Yes  
Agaricus bisporus var. bisporus
No Yes  
Schizophyllum commune
No Yes  
Stereum hirsutum FP-91666 SS1 v1.0
No Yes  
Heterobasidion annosum
No Yes  
Gloeophyllum trabeum v1.0
No Yes  
Punctularia strigosozonata v1.0
No Yes  
Sebacina vermifera MAFF 305830 v1.0
No Yes  
Fomitiporia mediterranea v1.0
No Yes  
Tulasnella calospora AL13/4D v1.0
No Yes  
Postia placenta
No Yes  
Wolfiporia cocos MD-104 SS10 v1.0
No Yes  
Fomitopsis pinicola v1.0
No Yes  
Fomitopsis pinicola FP-58527 SS1 v3.0
No Yes  
Dichomitus squalens
No Yes  
Trametes versicolor v1.0
No Yes  
Daldinia eschscholzii EC12 v1.0
No Yes  
Apiospora montagnei NRRL 25634 v1.0
No Yes  
Magnaporthe poae ATCC 64411 22
No Yes  
Magnaporthe grisea 70-15
No Yes  
Podospora anserina
No Yes  
Sporotrichum thermophile ATCC 42464
No Yes  
Thielavia terrestris NRRL 8126
No Yes  
Chaetomium globosum CBS 148.51
No Yes  
Neurospora tetrasperma
No Yes  
Neurospora discreta FGSC 8579
No Yes  
Neurospora crassa OR74A
No Yes  
Cryphonectria parasitica - Chestnut blight fungus
No Yes  
Verticillium albo-atrum VaMs.102
No Yes  
Verticillium dahliae VdLs.17
No Yes  
Acremonium alcalophilum v 1.0
No Yes  
Glomerella graminicola 22
No Yes  
Fusarium graminearum
No Yes  
Nectria haematococca mpVI
No Yes  
Fusarium oxysporum f. sp. lycopersici 4286
No Yes  
Fusarium verticillioides 7600
No Yes  
Trichoderma asperellum CBS 433.97 v1.0
No Yes  
Trichoderma atroviride
No Yes  
Trichoderma citrinoviride v1.0
No Yes  
Trichoderma reesei 1.2
No Yes  
Trichoderma virens Gv29-8
No Yes  
Trichoderma longibrachiatum ATCC 18648 v1.0
No Yes  
Trichoderma harzianum CBS 226.95 v1.0
No Yes  
Amorphotheca resinae v1.0 - Creosote fungus
No Yes  
Botrytis cinerea B05.10
No Yes  
Sclerotinia sclerotiorum
No Yes  
Blumeria graminis 22
No Yes  
Didymella exigua CBS 183.55 v1.0
No Yes  
Leptosphaeria maculans 22
No Yes  
Setosphaeria turcica v1.0
No Yes  
Cochliobolus miyabeanus ATCC 44560 v1.0
No Yes  
Cochliobolus victoriae FI3 v1.0
No Yes  
Cochliobolus carbonum 26-R-13 v1.0
No Yes  
Cochliobolus heterostrophus - Southern corn leaf blight pathogen
No Yes  
Alternaria brassicicola
No Yes  
Cochliobolus lunatus m118 v2.0
No Yes  
Pyrenophora teres f. teres 22
No Yes  
Pyrenophora tritici-repentis
No Yes  
Stagonospora nodorum
No Yes  
Mycosphaerella graminicola IPO323
No Yes  
Microsporum gypseum
No Yes  
Zasmidium cellare ATCC 36951 v1.0
No Yes  
Dothistroma septosporum
No Yes  
Septoria musiva v1.0
No Yes  
Mycosphaerella fijiensis CIRAD86
No Yes  
Aureobasidium pullulans var. subglaciale EXF-2481 v1.0
No Yes  
Paracoccidioides brasiliensis Pb18
No Yes  
Coccidioides posadasii RMSCC 3488
No Yes  
Coccidioides immitis RS
No Yes  
Ajellomyces dermatitidis SLH14081
No Yes  
Histoplasma capsulatum class NAmI strain WU24
No Yes  
Microsporum canis CBS 113480
No Yes  
Trichophyton equinum CBS 127.97
No Yes  
Trichophyton verrucosum HKI 0517
No Yes  
Arthroderma benhamiae CBS 112371
No Yes  
Trichophyton tonsurans CBS 112818
No Yes  
Trichophyton rubrum CBS 118892
No Yes  
Uncinocarpus reesii 1704
No Yes  
Aspergillus zonatus v1.0
No Yes  
Penicillium chrysogenum Wisconsin 54-1255
No Yes  
Penicillium chrysogenum v1.0
No Yes  
Aspergillus acidus v1.0
No Yes  
Aspergillus fumigatus Af293
No Yes  
Aspergillus brasiliensis v1.0
No Yes  
Aspergillus nidulans FGSC A4
No Yes  
Aspergillus sydowii v1.0
No Yes  
Aspergillus versicolor v1.0
No Yes  
Aspergillus glaucus
No Yes  
Aspergillus carbonarius ITEM 5010
No Yes  
Neosartorya fischeri NRRL 181
No Yes  
Aspergillus terreus NIH2624
No Yes  
Aspergillus tubingensis v1.0
No Yes  
Aspergillus wentii v1.0
No Yes  
Aspergillus oryzae RIB40
No Yes  
Aspergillus niger 22
No Yes  
Aspergillus niger ATCC 1015
No Yes  
Aspergillus flavus NRRL3357
No Yes  
Aspergillus clavatus NRRL 1
No Yes  
Penicillium marneffei ATCC 18224
No Yes  
Tuber melanosporum Mel28 22
No Yes  
Tuber melanosporum Vittad - Perigord truffle
No Yes  
Catenaria anguillulae PL171 v1.0
No Yes  
Allomyces macrogynus ATCC 38327
No Yes  
Spizellomyces punctatus DAOM BR117
No Yes  
Dictyostelium discoideum
No Yes  
Selaginella moellendorffii
No Yes  
Eucalyptus grandis v201 - Rose gum
No Yes  
Theobroma cacao B97-61/B2 v1 - Cacao
No Yes  
Gossypium raimondii v221
No Yes  
Citrus clementina v165
No Yes  
Citrus sinensis v154 - Sweet orange
No Yes  
Carica papaya - Papaya
No Yes  
Medicago truncatula - Barrel medic
No Yes  
Phaseolus vulgaris v186 - String bean
No Yes  
Glycine max v109 - Soybean
No Yes  
Cucumis sativus v122 - Cucumber
No Yes  
Fragaria vesca - Wild strawberry
No Yes  
Malus domestica v196 - Apple
No Yes  
Prunus persica v139 - Peach
No Yes  
Linum usitatissimum v200 - Flax
No Yes  
Manihot esculenta v147 - Cassava
No Yes  
Populus trichocarpa v156 - Black cottonwood
No Yes  
Vitis vinifera - Wine grape
No Yes  
Mimulus guttatus v140 - Spotted monkey flower
No Yes  
Solanum lycopersicum v.2.3 - Tomato
No Yes  
Solanum tuberosum - Potato
No Yes  
Actinidia chinensis Hongyang
No Yes  
Aquilegia coerulea v195
No Yes  
Triticum urartu 22
No Yes  
Triticum aestivum 22 - Bread wheat
No Yes  
Aegilops tauschii 22
No Yes  
Brachypodium distachyon - Stiff brome
No Yes  
Oryza barthii 22 - African wild rice
No Yes  
Oryza meridionalis 22
No Yes  
Oryza glumaepatula 22
No Yes  
Oryza glaberrima - African rice
No Yes  
Oryza punctata 22
No Yes  
Oryza nivara 22
No Yes  
Oryza brachyantha 22 - Malo sina
No Yes  
Oryza sativa ssp. japonica 5.0 - Japanese rice
No Yes  
Oryza sativa v193 - Rice
No Yes  
Phyllostachys heterocycla var. pubescens - Mosochiku
No Yes  
Panicum virgatum v202 - Switchgrass
No Yes  
Setaria italica v164 - Foxtail millet
No Yes  
Zea mays subsp. mays - Maize
No Yes  
Zea mays v181 - Maize
No Yes  
Sorghum bicolor - Sorghum
No Yes  
Musa balbisiana - Balbis banana
No Yes  
Musa acuminata 22 - Wild Malaysian banana
No Yes  
Physcomitrella patens
No Yes  
Chlorella variabilis sp. NC64A
No Yes  
Volvox carteri f. nagariensis
No Yes  
Volvox carteri v199
No Yes  
Chlamydomonas reinhardtii 4.0
No Yes  
Bigelowiella natans CCMP2755 22
No Yes  
Ectocarpus siliculosus
No Yes  
Aureococcus anophagefferens
No Yes  
Albugo laibachii 22
No Yes  
Pythium iwayamai DAOM BR242034 22
No Yes  
Pythium arrhenomanes ATCC 12531 22
No Yes  
Pythium ultimum v1.7-2
No Yes  
Pythium aphanidermatum DAOM BR444 22
No Yes  
Pythium irregulare DAOM BR486 22
No Yes  
Pythium vexans DAOM BR484 22
No Yes  
Phytophthora ramorum 1.1 - Sudden oak death agent
No Yes  
Phytophthora sojae 1.1
No Yes  
Phytophthora infestans T30-4
No Yes  
Phytophthora capsici
No Yes  
Hyaloperonospora arabidopsidis 22
No Yes  
Phaeodactylum tricornutum CCAP 1055/1
No Yes  
Fragilariopsis cylindrus
No Yes  
Symbiodinium minutum clade B1 v1.2
No Yes  
Emiliania huxleyi CCMP1516
No Yes  
Acaryochloris marina MBIC11017
No Yes  
Gloeocapsa sp. PCC 7428
No Yes  
Rivularia sp. PCC 7116
No Yes  
Nostoc punctiforme PCC 73102
No Yes  
Rubrobacter xylanophilus DSM 9941
No Yes  
Geodermatophilus obscurus DSM 43160
No Yes  
Frankia symbiont of Datisca glomerata
No Yes  
Frankia sp. EAN1pec
No Yes  
Frankia alni ACN14a
No Yes  
Streptomyces coelicolor A3(2)
No Yes  
Streptomyces sp. PAMC26508
No Yes  
Streptomyces flavogriseus ATCC 33331
No Yes  
Streptomyces sp. SirexAA-E
No Yes  
Streptomyces griseus subsp. griseus NBRC 13350
No Yes  
Streptomyces avermitilis MA-4680
No Yes  
Streptomyces scabiei 87.22
No Yes  
Streptomyces hygroscopicus subsp. jinggangensis 5008
No Yes  
Actinoplanes sp. SE50/110
No Yes  
Corynebacterium efficiens YS-314
No Yes  
Cellulomonas flavigena DSM 20109
No Yes  
Bacillus sp. 1NLA3E
No Yes  
Bacillus atrophaeus 1942
No Yes  
Bacillus megaterium DSM 319
No Yes  
Haliscomenobacter hydrossis DSM 1100
No Yes  
Dyadobacter fermentans DSM 18053
No Yes  
Cellulophaga algicola DSM 14237
No Yes  
Rhodopirellula baltica SH 1
No Yes  
Candidatus Solibacter usitatus Ellin6076
No Yes  
Granulicella mallensis MP5ACTX8
No Yes  
Terriglobus saanensis SP1PR4
No Yes  
Candidatus Nitrospira defluvii
No Yes  
Sorangium cellulosum 'So ce 56'
No Yes  
Anaeromyxobacter dehalogenans 2CP-1
No Yes  
Stigmatella aurantiaca DW4/3-1
No Yes  
Chromobacterium violaceum ATCC 12472
No Yes  
Burkholderia phymatum STM815
No Yes  
Ralstonia solanacearum CFBP2957
No Yes  
Burkholderia thailandensis E264
No Yes  
Burkholderia pseudomallei 1106a
No Yes  
Delftia acidovorans SPH-1
No Yes  
Nitrosospira multiformis ATCC 25196
No Yes  
Nitrosomonas europaea ATCC 19718
No Yes  
Ruegeria pomeroyi DSS-3
No Yes  
Paracoccus denitrificans PD1222
No Yes  
Azospirillum lipoferum 4B
No Yes  
Methylobacterium sp. 4-46
No Yes  
Sinorhizobium medicae WSM419
No Yes  
Sinorhizobium meliloti AK83
No Yes  
Agrobacterium vitis S4
No Yes  
Mesorhizobium opportunistum WSM2075
No Yes  
Mesorhizobium ciceri biovar biserrulae WSM1271
No Yes  
Nitrobacter winogradskyi Nb-255
No Yes  
Nitrobacter hamburgensis X14
No Yes  
Methylocystis sp. SC2
No Yes  
Saccharophagus degradans 2-40
No Yes  
Cellvibrio japonicus Ueda107
No Yes  
Hahella chejuensis KCTC 2396
No Yes  
Marinomonas mediterranea MMB-1
No Yes  
Azotobacter vinelandii DJ
No Yes  
Pseudomonas sp. TKP
No Yes  
Pseudomonas sp. UW4
No Yes  
Pseudomonas brassicacearum subsp. brassicacearum NFM421
No Yes  
Pseudomonas entomophila L48
No Yes  
Pseudomonas syringae pv. tomato str. DC3000
No Yes  
Pseudomonas putida F1
No Yes  
Pseudomonas fluorescens SBW25
No Yes  
Pseudomonas aeruginosa UCBPP-PA14
No Yes  
Pseudomonas sp. VLB120
No Yes  
Candidatus Nitrosopumilus sp. AR2
No Yes  
Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) - Tropical clawed frog
No Yes  
Drosophila melanogaster FlyBase 5.12 - Fruit fly
No Yes  
Anopheles gambiae VectorBase AgamP3.6 - African malaria mosquito
No Yes  
Ascaris suum Victoria/Ghent - Pig roundworm
No Yes  
Caenorhabditis elegans WormBase WS218 - Roundworm
No Yes  
Paracoccidioides brasiliensis Pb01
No Yes  
Paracoccidioides brasiliensis Pb03
No Yes  
Coccidioides posadasii str. Silveira
No Yes  
Coccidioides immitis RMSCC 3703
No Yes  
Coccidioides immitis RMSCC 2394
No Yes  
Coccidioides immitis H538.4
No Yes  
Ajellomyces dermatitidis ER-3
No Yes  
Histoplasma capsulatum H143
No Yes  
Histoplasma capsulatum H88
No Yes  
Histoplasma capsulatum G186AR
No Yes  
Aspergillus fumigatus A1163
No Yes  
Batrachochytrium dendrobatidis JEL423
No Yes  
Batrachochytrium dendrobatidis JAM81
No Yes  
Theobroma cacao Matina 1-6 v0.9 - Cacao
No Yes  
Hordeum vulgare 22 - Domesticated barley
No Yes  
Oryza sativa ssp. Indica - Long-grained rice
No Yes  
Chroococcidiopsis thermalis PCC 7203
No Yes  
Frankia sp. CcI3
No Yes  
Streptomyces davawensis JCM 4913
No Yes  
Streptomyces fulvissimus DSM 40593
No Yes  
Streptomyces venezuelae ATCC 10712
No Yes  
Streptomyces collinus Tu 365
No Yes  
Streptomyces hygroscopicus subsp. jinggangensis TL01
No Yes  
Saccharothrix espanaensis DSM 44229
No Yes  
Bacillus thuringiensis BMB171
No Yes  
Bacillus thuringiensis serovar thuringiensis str. IS5056
No Yes  
Bacillus cereus AH820
No Yes  
Bacillus cereus ATCC 10987
No Yes  
Bacillus megaterium WSH-002
No Yes  
Bacillus megaterium QM B1551
No Yes  
Singulisphaera acidiphila DSM 18658
No Yes  
Sorangium cellulosum So0157-2
No Yes  
Ralstonia solanacearum FQY_4
No Yes  
Ralstonia solanacearum Po82
No Yes  
Ralstonia solanacearum PSI07
No Yes  
Ralstonia solanacearum CMR15
No Yes  
Ralstonia solanacearum GMI1000
No Yes  
Burkholderia thailandensis MSMB121
No Yes  
Burkholderia pseudomallei MSHR305
No Yes  
Burkholderia pseudomallei NCTC 13179
No Yes  
Burkholderia pseudomallei BPC006
No Yes  
Burkholderia pseudomallei 1026b
No Yes  
Burkholderia pseudomallei 668
No Yes  
Burkholderia pseudomallei 1710b
No Yes  
Burkholderia pseudomallei K96243
No Yes  
Burkholderia lata
No Yes  
Sinorhizobium fredii HH103
No Yes  
Sinorhizobium meliloti 2011
No Yes  
Sinorhizobium meliloti GR4
No Yes  
Sinorhizobium meliloti SM11
No Yes  
Sinorhizobium meliloti BL225C
No Yes  
Sinorhizobium meliloti 1021
No Yes  
Rhizobium etli CFN 42
No Yes  
Mesorhizobium australicum WSM2073
No Yes  
Rhodopseudomonas palustris HaA2
No Yes  
Bradyrhizobium oligotrophicum S58
No Yes  
Bradyrhizobium japonicum USDA 6
No Yes  
Vibrio nigripulchritudo VibrioScope
No Yes  
Stenotrophomonas maltophilia JV3
No Yes  
Azotobacter vinelandii CA6
No Yes  
Azotobacter vinelandii CA
No Yes  
Pseudomonas syringae pv. phaseolicola 1448A
No Yes  
Pseudomonas syringae pv. syringae B728a
No Yes  
Pseudomonas monteilii SB3101
No Yes  
Pseudomonas monteilii SB3078
No Yes  
Pseudomonas putida H8234
No Yes  
Pseudomonas putida HB3267
No Yes  
Pseudomonas putida NBRC 14164
No Yes  
Pseudomonas putida DOT-T1E
No Yes  
Pseudomonas putida S16
No Yes  
Pseudomonas putida BIRD-1
No Yes  
Pseudomonas putida W619
No Yes  
Pseudomonas putida ND6
No Yes  
Pseudomonas putida KT2440
No Yes  
Pseudomonas putida GB-1
No Yes  
Pseudomonas poae RE*1-1-14
No Yes  
Pseudomonas fluorescens F113
No Yes  
Pseudomonas fluorescens A506
No Yes  
Pseudomonas fluorescens R124
No Yes  
Pseudomonas fluorescens Pf0-1
No Yes  
Pseudomonas resinovorans NBRC 106553
No Yes  
Pseudomonas aeruginosa SCV20265
No Yes  
Pseudomonas aeruginosa MTB-1
No Yes  
Pseudomonas aeruginosa LES431
No Yes  
Pseudomonas aeruginosa RP73
No Yes  
Pseudomonas aeruginosa B136-33
No Yes  
Pseudomonas aeruginosa PA1R
No Yes  
Pseudomonas aeruginosa PA1
No Yes  
Pseudomonas aeruginosa DK2
No Yes  
Pseudomonas aeruginosa M18
No Yes  
Pseudomonas aeruginosa LESB58
No Yes  
Pseudomonas aeruginosa PA7
No Yes  
Pseudomonas aeruginosa PAO1
No Yes  
Acinetobacter calcoaceticus ruh2202
No Yes  
Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1
No Yes  
Homo sapiens 69_37 - Human
No Yes  
Pan troglodytes 69_2.1.4 - Chimpanzee
No Yes  
Gorilla gorilla 69_3.1 - Western gorilla
No Yes  
Pongo abelii 69_2 - Sumatran orangutan
No Yes  
Nomascus leucogenys 69_1.0 - Northern white-cheeked gibbon
No Yes  
Macaca mulatta 69_1 - Rhesus monkey
No Yes  
Callithrix jacchus 69_3.2.1 - White-tufted-ear marmoset
No Yes  
Otolemur garnettii 69_3 - Small-eared galago
No Yes  
Tarsius syrichta 69_1
No Yes  
Microcebus murinus 69_1 - Gray mouse lemur
No Yes  
Rattus norvegicus 69_3.4 - Norway rat
No Yes  
Mus musculus 69_38 - House mouse
No Yes  
Dipodomys ordii 69_1 - Ord's kangaroo rat
No Yes  
Ictidomys tridecemlineatus 69_2 - Thirteen-lined ground squirrel
No Yes  
Cavia porcellus 69_3 - Domestic guinea pig
No Yes  
Oryctolagus cuniculus 69_2 - Rabbit
No Yes  
Ochotona princeps 69 - American pika
No Yes  
Tupaia belangeri 69 - Northern tree shrew
No Yes  
Sus scrofa 69_10.2 - Pig
No Yes  
Bos taurus 69_3.1 - Cattle
No Yes  
Vicugna pacos 69_1 - Alpaca
No Yes  
Tursiops truncatus 69_1 - Bottlenose dolphin
No Yes  
Mustela putorius furo 69_1.0 - Domestic ferret
No Yes  
Ailuropoda melanoleuca 69_1 - Giant panda
No Yes  
Canis familiaris 69_3.1 - Dog
No Yes  
Felis catus 69 - Domestic cat
No Yes  
Equus caballus 69_2 - Horse
No Yes  
Myotis lucifugus 69_2.0 - Little brown bat
No Yes  
Pteropus vampyrus 69_1 - Large flying fox
No Yes  
Sorex araneus 69_1 - European shrew
No Yes  
Erinaceus europaeus 69 - Western European hedgehog
No Yes  
Procavia capensis 69_1 - Cape rock hyrax
No Yes  
Loxodonta africana 69_3 - African savanna elephant
No Yes  
Echinops telfairi 69 - Small Madagascar hedgehog
No Yes  
Dasypus novemcinctus 69_2 - Nine-banded armadillo
No Yes  
Choloepus hoffmanni 69_1 - Hoffmann's two-fingered sloth
No Yes  
Macropus eugenii 69_1.0 - Tammar wallaby
No Yes  
Sarcophilus harrisii 69_7.0 - Tasmanian devil
No Yes  
Monodelphis domestica 69_5 - Gray short-tailed opossum
No Yes  
Ornithorhynchus anatinus 69_5 - Platypus
No Yes  
Petromyzon marinus 69_7.0 - Sea lamprey
No Yes  
Meleagris gallopavo 69_2 - Turkey
No Yes  
Gallus gallus 69_2 - Chicken
No Yes  
Taeniopygia guttata 69_3.2.4 - Zebra finch
No Yes  
Pelodiscus sinensis 69_1.0 - Chinese soft-shelled turtle
No Yes  
Anolis carolinensis 69_2.0 - Green anole
No Yes  
Xenopus tropicalis 69_4.2 - Tropical clawed frog
No Yes  
Latimeria chalumnae 69_1 - Coelacanth
No Yes  
Gadus morhua 69_1 - Atlantic cod
No Yes  
Tetraodon nigroviridis 69_8 - Spotted green pufferfish
No Yes  
Takifugu rubripes 69_4 - Torafugu
No Yes  
Gasterosteus aculeatus 69_1 - Three-spined stickleback
No Yes  
Oryzias latipes 69_1 - Japanese medaka
No Yes  
Xiphophorus maculatus 69_4.4.2 - Southern platyfish
No Yes  
Oreochromis niloticus 69_1.0 - Nile tilapia
No Yes  
Danio rerio 69_9 - Zebrafish
No Yes  
Ciona savignyi 69_2.0 - Pacific transparent sea squirt
No Yes  
Ciona intestinalis 69 - Vase tunicate
No Yes  
Drosophila melanogaster 69_5 - Fruit fly
No Yes  
Caenorhabditis elegans 69_215 - Roundworm
No Yes  
Homo sapiens 75_37 - Human
No Yes  
Homo sapiens - Human
No Yes  
Mus musculus 63_37 (longest transcript per gene) - House mouse
No Yes  
Heliconius numata
No Yes  
Loa loa v3.3 - Eye worm
No Yes  
Wuchereria bancrofti v1.0 - Agent of lymphatic filariasis
No Yes  
Brugia malayi v1.0 - Agent of lymphatic filariasis
No Yes  
Moniliophthora perniciosa FA553
No Yes  
Lotus japonicus
No Yes  
Malus x domestica - Apple
No Yes  
Ricinus communis - Castor bean
No Yes  
Nicotiana benthamiana 0.4.4
No Yes  
Solanum pimpinellifolium A-1.0 - Currant tomato
No Yes  
Solanum lycopersicum v2.3 - Tomato
No Yes  
Phoenix dactylifera - Date palm
No Yes  
Combined (meta-genome)
No Yes  
Cyphomyrmex longiscapus fungus garden (meta-genome)
No Yes  
Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)
No Yes  
Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)
No Yes  
Dump bottom (Dump bottom) (meta-genome)
No Yes  
Dump top (Dump top) (meta-genome)
No Yes  
Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)
No Yes  
Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)
No Yes  
Fungus garden combined (combined) (meta-genome)
No Yes  
Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)
No Yes  
Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)
No Yes  
Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)
No Yes  
Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)
No Yes  
Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)
No Yes  
Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)
No Yes  
Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)
No Yes  
Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)
No Yes  
Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)
No Yes  
Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)
No Yes  
NCBI 2017_08 genome
No Yes  
Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)
No Yes  
simHC - Simulated High Complexity Metagenome (meta-genome)
No Yes  
simLC - Simulated Low Complexity Metagenome (meta-genome)
No Yes  
simMC - Simulated Medium Complexity Metagenome (meta-genome)
No Yes  
Soil microbial communities from Minnesota Farm (meta-genome)
No Yes  
Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)
No Yes  
Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)
No Yes  
Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)
No Yes  
Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)
No Yes  
Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)
No Yes  
Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)
No Yes  
STRING v9.0.5 (STRING)
No Yes  
Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)
No Yes  
Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)
No Yes  
Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)
No Yes  
Uniprot 2018_03 genome
No Yes  
Global Ocean Sampling Expedition (GOS)
No Yes  
NCBI plasmid sequences (Plasmids)
No Yes  
PDB chains (SCOP 1.75 ) (PDB)
No Yes  
Protein Data Bank (all PDB sequenc)
No Yes  
SCOP2 SCOPe CATH ECOD (all domain sequ)
No Yes  
TargetDB (Targets)
No Yes
ALL (only advised for small superfamilies)