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Domain combinations for 101936,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

101936 - DNA-binding pseudobarrel domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Selaginella_moellendorffii_ 1
Pinus_taeda   (Loblolly pine)   5
Picea_abies   (Norway spruce)   7
Eucalyptus_grandis_v201   (Rose gum)   12
Theobroma_cacao_B97-61/B2_v1   (Cacao)   19
Gossypium_raimondii_v221 34
Citrus_clementina_v165 7
Citrus_sinensis_v154   (Sweet orange)   12
Thellungiella_halophila_v173 11
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   29
Capsella_rubella_v183 10
Arabidopsis_lyrata_   (Lyrate rockcress)   11
Arabidopsis_thaliana_10   (Thale cress)   19
Carica_papaya_   (Papaya)   8
Medicago_truncatula_   (Barrel medic)   28
Phaseolus_vulgaris_v186   (French bean)   3
Glycine_max_v109   (Soybean)   26
Cucumis_sativus_v122   (Cucumber)   14
Fragaria_vesca_   (Wild strawberry)   11
Malus_domestica_v196   (Apple)   7
Prunus_persica_v139   (Peach)   9
Linum_usitatissimum_v200   (Flax)   14
Manihot_esculenta_v147   (Cassava)   4
Populus_trichocarpa_v156   (Black cottonwood)   19
Vitis_vinifera_   (Wine grape)   6
Mimulus_guttatus_v140   (Spotted monkey flower)   13
Solanum_lycopersicum_v.2.3   (Tomato)   14
Solanum_tuberosum_   (Potato)   31
Actinidia_chinensis_Hongyang_ 13
Aquilegia_coerulea_v195 18
Triticum_urartu_22 11
Triticum_aestivum_22   (Bread wheat)   44
Aegilops_tauschii_22 11
Brachypodium_distachyon_   (Stiff brome)   8
Oryza_barthii_22   (African wild rice)   12
Oryza_meridionalis_22 11
Oryza_glumaepatula_22 15
Oryza_glaberrima   (African rice)   10
Oryza_punctata_22 11
Oryza_nivara_22 15
Oryza_brachyantha_22   (Malo sina)   11
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   14
Oryza_sativa_v193   (Rice)   13
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   8
Panicum_virgatum_v202   (Switchgrass)   25
Setaria_italica_v164   (Foxtail millet)   12
Zea_mays_subsp._mays_   (Maize)   17
Zea_mays_v181   (Maize)   17
Sorghum_bicolor_   (Sorghum)   11
Musa_balbisiana   (Balbis banana)   14
Musa_acuminata_22   (Wild Malaysian banana)   19
Amborella_trichopoda_22 4
Physcomitrella_patens 2
Coccomyxa_subellipsoidea_sp._C-169_v2 1
Asterochloris_sp._Cgr/DA1pho_v1.0 1
Chlorella_variabilis_sp._NC64A_ 3
Chlorella_vulgaris_ 0
Volvox_carteri_f._nagariensis_ 1
Chlamydomonas_reinhardtii_4.0 0
Micromonas_sp._RCC299_ 0
Micromonas_pusilla_CCMP1545_v3.0 0
Thauera_sp._MZ1T 1

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Strains
Genome     Number
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   17
Hordeum_vulgare_22   (Domesticated barley)   50
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   11

Longest transcript per gene
Genome     Number
Arabidopsis_thaliana_10   (Thale cress)   15

Others
Genome     Number
Lotus_japonicus__(Early_assembly) 12
Malus_x_domestica_(Duplicate)   (Apple)   7
Ricinus_communis__(Early_assembly)   (Castor bean)   1
Nicotiana_benthamiana_0.4.4_(Early_draft) 17
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   14
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   14
Phoenix_dactylifera__(Early_draft)   (Date palm)   8
NCBI_plasmid_sequences_(Plasmids) 1
Uniprot_2018_03_genome 4137
TargetDB__(Targets) 7
STRING_v9.0.5_(STRING) 92
NCBI_2017_08_genome 1092

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