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Domain combinations for 103025,116878,52540,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

103025 - Folate-binding domain
116878 - TrmE connector domain
52540 - P-loop containing nucleoside triphosphate hydrolases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Fomitiporia_mediterranea_v1.0 0
Postia_placenta_ 0
Mycosphaerella_fijiensis_CIRAD86_ 1
Coccidioides_immitis_RS_ 1
Trichophyton_equinum_CBS_127.97_ 1
Schizosaccharomyces_japonicus_yFS275_ 1
Oryza_barthii_22   (African wild rice)   2
Bathycoccus_prasinos_ 0
Micromonas_pusilla_CCMP1545_v3.0 2
Plasmodium_falciparum_3D7_ 0
Plasmodium_knowlesi_strain_H_ 0
Plasmodium_yoelii_ssp._yoelii_1_ 0
Plasmodium_chabaudi_ 0
Streptococcus_equi_subsp._equi_4047 1
Streptococcus_macedonicus_ACA-DC_198 1
Gemmatimonas_aurantiaca_T-27 1
Ignavibacterium_album_JCM_16511 1
Isosphaera_pallida_ATCC_43644 1
Planctomyces_brasiliensis_DSM_5305 1
Planctomyces_limnophilus_DSM_3776 1
Rhodopirellula_baltica_SH_1 1
Spirochaeta_smaragdinae_DSM_11293 1
Sphaerochaeta_coccoides_DSM_17374 1
Candidatus_Riesia_pediculicola_USDA 1

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Strains
Genome     Number
Coccidioides_immitis_RMSCC_2394_ 1
Coccidioides_immitis_H538.4_ 1
Histoplasma_capsulatum_G186AR 1
Plasmodium_falciparum_HB3_ 0
Streptococcus_constellatus_subsp._pharyngis_C1050 1
Streptococcus_constellatus_subsp._pharyngis_C818 1
Streptococcus_constellatus_subsp._pharyngis_C232 1
Streptococcus_equi_subsp._zooepidemicus_ATCC_35246 1
Streptococcus_equi_subsp._zooepidemicus_MGCS10565 1
Streptococcus_equi_subsp._zooepidemicus 1
Streptococcus_iniae_SF1 1
Myxococcus_stipitatus_DSM_14675 1
Candidatus_Carsonella_ruddii_HT_isolate_Thao2000 1
Candidatus_Carsonella_ruddii_CS_isolate_Thao2000 1
Candidatus_Carsonella_ruddii_CE_isolate_Thao2000 1

Longest transcript per gene
Genome     Number
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   1

Others
Genome     Number
Protozoadb_2010_08_(Protozoadb) 2
STRING_v9.0.5_(STRING) 5
Uniprot_2018_03_genome 2470
NCBI_2017_08_genome 453

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