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Domain combinations for 141571,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

141571 - Pentapeptide repeat-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   0
Pan_troglodytes_76_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_76_3.1   (Western gorilla)   0
Pongo_abelii_76_2   (Sumatran orangutan)   0
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   0
Papio_anubis_76   (Olive baboon)   0
Macaca_mulatta_76_1   (Rhesus monkey)   0
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   0
Otolemur_garnettii_76_3   (Small-eared galago)   0
Microcebus_murinus_76_1   (Gray mouse lemur)   0
Rattus_norvegicus_76_5.0   (Norway rat)   0
Mus_musculus_76_38   (House mouse)   0
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   0
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   0
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   0
Cavia_porcellus_76_3   (Domestic guinea pig)   0
Oryctolagus_cuniculus_76_2   (Rabbit)   0
Ochotona_princeps_76   (American pika)   0
Tupaia_belangeri_76   (Northern tree shrew)   0
Sus_scrofa_76_10.2   (Pig)   0
Bos_taurus_76_3.1   (Cattle)   0
Ovis_aries_76_3.1   (Sheep)   0
Vicugna_pacos_76_1   (Alpaca)   0
Tursiops_truncatus_76_1   (Bottlenose dolphin)   0
Mustela_putorius_furo_76_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_76_1   (Giant panda)   0
Canis_familiaris_76_3.1   (Dog)   0
Felis_catus_76_6.2   (Domestic cat)   0
Equus_caballus_76_2   (Horse)   0
Myotis_lucifugus_76_2.0   (Little brown bat)   0
Pteropus_vampyrus_76_1   (Large flying fox)   0
Sorex_araneus_76_1   (European shrew)   0
Erinaceus_europaeus_76   (Western European hedgehog)   0
Procavia_capensis_76_1   (Cape rock hyrax)   0
Loxodonta_africana_76_3   (African savanna elephant)   0
Echinops_telfairi_76   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   0
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   0
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   0
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   0
Ornithorhynchus_anatinus_76_5   (Platypus)   0
Saccoglossus_kowalevskii_v3.0 7
Petromyzon_marinus_76_7.0   (Sea lamprey)   0
Meleagris_gallopavo_76_2   (Turkey)   0
Gallus_gallus_76_4   (Chicken)   0
Anas_platyrhynchos_76_1.0   (Mallard)   0
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   0
Ficedula_albicollis_76_1.0   (Collared flycatcher)   0
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   0
Anolis_carolinensis_76_2.0   (Green anole)   0
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   0
Latimeria_chalumnae_76_1   (Coelacanth)   0
Lepisosteus_oculatus_76   (Spotted gar)   1
Gadus_morhua_76_1   (Atlantic cod)   0
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   0
Takifugu_rubripes_76_4   (Torafugu)   0
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   0
Oryzias_latipes_76_1   (Japanese medaka)   0
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   0
Poecilia_formosa_76   (Amazon molly)   0
Oreochromis_niloticus_76_1.0   (Nile tilapia)   0
Astyanax_mexicanus_76   (Mexican tetra)   0
Danio_rerio_76_9   (Zebrafish)   0
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   1
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   2
Adineta_vaga 2
Octopus_bimaculoides_280 1
Crassostrea_gigas_22   (Pacific oyster)   1
Lottia_gigantea_   (Owl limpet)   3
Helobdella_robusta_ 1
Capitella_sp._I_ 2
Danaus_plexippus_OGS1.0   (Monarch butterfly)   0
Bombyx_mori_   (Domestic silkworm)   1
Nasonia_vitripennis_   (Jewel wasp)   0
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   0
Linepithema_humile_v1.1   (Argentine ant)   0
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   0
Solenopsis_invicta_v.2.2.3   (Red fire ant)   0
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   0
Atta_cephalotes_v1.1 0
Camponotus_floridanus_v3.3   (Florida carpenter ant)   0
Drosophila_simulans_1.3 1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   1
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   0
Rhodnius_prolixus_22 0
Daphnia_pulex_   (Common water flea)   2
Strigamia_maritima_22 2
Sarcoptes_scabiei 0
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   0
Onchocerca_volvulus_22 1
Caenorhabditis_japonica_ 0
Caenorhabditis_remanei_ 1
Caenorhabditis_briggsae_2 0
Mnemiopsis_leidyi   (Sea walnut)   1
Nematostella_vectensis_1.0   (Starlet sea anemone)   6
Hydra_vulgaris 0
Amphimedon_queenslandica 0
Proterospongia_sp._ATCC_50818_ 0
Monosiga_brevicollis_ 0
Sphaeroforma_arctica_JP610_ 0
Capsaspora_owczarzaki_ATCC_30864_ 0
Rhizopus_oryzae_RA_99-880_ 0
Rhodotorula_graminis_WP1_v1.0 0
Microbotryum_violaceum_22 0
Piloderma_croceum_F_1598_v1.0 0
Heterobasidion_annosum_ 1
Apiospora_montagnei_NRRL_25634_v1.0 0
Neurospora_discreta_FGSC_8579_ 1
Cochliobolus_victoriae_FI3_v1.0 1
Mycosphaerella_graminicola_IPO323_ 0
Zasmidium_cellare_ATCC_36951_v1.0 1
Dothistroma_septosporum 0
Septoria_musiva_v1.0 0
Coccidioides_posadasii_RMSCC_3488_ 1
Coccidioides_immitis_RS_ 1
Ajellomyces_dermatitidis_SLH14081_ 0
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 0
Uncinocarpus_reesii_1704_ 1
Aspergillus_zonatus_v1.0 0
Aspergillus_acidus_v1.0 1
Aspergillus_fumigatus_Af293 1
Aspergillus_brasiliensis_v1.0 1
Aspergillus_nidulans_FGSC_A4_ 0
Aspergillus_sydowii_v1.0 0
Aspergillus_versicolor_v1.0 0
Neosartorya_fischeri_NRRL_181_ 1
Aspergillus_tubingensis_v1.0 1
Aspergillus_oryzae_RIB40_ 0
Aspergillus_niger_22 1
Aspergillus_niger_ATCC_1015_ 1
Aspergillus_flavus_NRRL3357_ 0
Aspergillus_clavatus_NRRL_1_ 1
Dekkera_bruxellensis_CBS_2499_v2.0 0
Lodderomyces_elongisporus_NRRL_YB-4239_ 0
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 0
Catenaria_anguillulae_PL171_v1.0 0
Allomyces_macrogynus_ATCC_38327_ 0
Dictyostelium_discoideum 0
Dictyostelium_purpureum_ 0
Entamoeba_invadens_1.2 1
Picea_abies   (Norway spruce)   1
Eucalyptus_grandis_v201   (Rose gum)   0
Theobroma_cacao_B97-61/B2_v1   (Cacao)   0
Gossypium_raimondii_v221 1
Citrus_clementina_v165 2
Citrus_sinensis_v154   (Sweet orange)   0
Carica_papaya_   (Papaya)   0
Medicago_truncatula_   (Barrel medic)   1
Phaseolus_vulgaris_v186   (French bean)   0
Glycine_max_v109   (Soybean)   0
Fragaria_vesca_   (Wild strawberry)   0
Malus_domestica_v196   (Apple)   2
Prunus_persica_v139   (Peach)   1
Linum_usitatissimum_v200   (Flax)   0
Manihot_esculenta_v147   (Cassava)   0
Populus_trichocarpa_v156   (Black cottonwood)   0
Vitis_vinifera_   (Wine grape)   0
Mimulus_guttatus_v140   (Spotted monkey flower)   0
Solanum_lycopersicum_v.2.3   (Tomato)   0
Solanum_tuberosum_   (Potato)   2
Aquilegia_coerulea_v195 0
Triticum_urartu_22 0
Triticum_aestivum_22   (Bread wheat)   0
Aegilops_tauschii_22 0
Brachypodium_distachyon_   (Stiff brome)   0
Oryza_barthii_22   (African wild rice)   0
Oryza_meridionalis_22 0
Oryza_glumaepatula_22 0
Oryza_glaberrima   (African rice)   0
Oryza_punctata_22 0
Oryza_nivara_22 0
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   0
Oryza_sativa_v193   (Rice)   0
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   0
Panicum_virgatum_v202   (Switchgrass)   1
Setaria_italica_v164   (Foxtail millet)   0
Zea_mays_subsp._mays_   (Maize)   0
Zea_mays_v181   (Maize)   0
Sorghum_bicolor_   (Sorghum)   0
Amborella_trichopoda_22 1
Physcomitrella_patens 0
Asterochloris_sp._Cgr/DA1pho_v1.0 1
Chlorella_variabilis_sp._NC64A_ 1
Volvox_carteri_f._nagariensis_ 1
Volvox_carteri_v199 1
Micromonas_sp._RCC299_ 0
Micromonas_pusilla_CCMP1545_v3.0 0
Porphyridium_purpureum_02_2012 0
Thecamonas_trahens_ATCC_50062_ 0
Cyanophora_paradoxa_ 0
Phytophthora_ramorum_1.1   (Sudden oak death agent)   0
Phytophthora_capsici_ 1
Phaeodactylum_tricornutumCCAP_1055/1 1
Paramecium_tetraurelia_ 0
Ichthyophthirius_multifiliis_strain_G5_ 1
Neospora_caninum 0
Toxoplasma_gondii_VEG 0
Toxoplasma_gondii_ME49 0
Theileria_annulata 0
Plasmodium_falciparum_3D7_ 0
Plasmodium_vivax_SaI-1_7.0 1
Plasmodium_knowlesi_strain_H_ 0
Plasmodium_yoelii_ssp._yoelii_1_ 1
Plasmodium_chabaudi_ 1
Plasmodium_berghei_ANKA_ 1
Symbiodinium_minutum_clade_B1_v1.2 0
Naegleria_gruberi_ 0
Guillardia_theta_CCMP2712_v1.0_ 1
Emiliania_huxleyi_CCMP1516_ 2
Leptolyngbya_sp._PCC_7376 2
Pseudanabaena_sp._PCC_7367 3
Acaryochloris_marina_MBIC11017 10
Synechocystis_sp._PCC_6803 1
Thermosynechococcus_sp._NK55 2
Thermosynechococcus_elongatus_BP-1 2
Synechococcus_sp._PCC_7502 1
Synechococcus_sp._PCC_6312 2
Microcoleus_sp._PCC_7113 3
Trichodesmium_erythraeum_IMS101 0
Geitlerinema_sp._PCC_7407 2
Cyanothece_sp._PCC_8802 4
Gloeocapsa_sp._PCC_7428 1
cyanobacterium_UCYN-A 1
Microcystis_aeruginosa_NIES-843 0
Gloeobacter_violaceus_PCC_7421 2
Rivularia_sp._PCC_7116 3
Calothrix_sp._PCC_7507 0
Anabaena_variabilis_ATCC_29413 2
'Nostoc_azollae'_0708 0
Nostoc_sp._PCC_7107 0
Nostoc_punctiforme_PCC_73102 2
Nostoc_sp._PCC_7120 4
Nostoc_sp._PCC_7524 2
Anabaena_sp._90 1
Mycoplasma_leachii_99/014/6 0
Mycoplasma_mycoides_subsp._capri_LC_str._95010 0
Eggerthella_sp._YY7918 0
Acidimicrobium_ferrooxidans_DSM_10331 1
Geodermatophilus_obscurus_DSM_43160 0
Catenulispora_acidiphila_DSM_44928 0
Stackebrandtia_nassauensis_DSM_44728 0
Frankia_sp._EAN1pec 0
Frankia_alni_ACN14a 0
Streptosporangium_roseum_DSM_43021 0
Kitasatospora_setae_KM-6054 2
Streptomyces_bingchenggensis_BCW-1 1
Streptomyces_avermitilis_MA-4680 0
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 0
Pseudonocardia_dioxanivorans_CB1190 0
Nocardioides_sp._JS614 0
Microlunatus_phosphovorus_NM-1 1
Micromonospora_sp._L5 0
Micromonospora_aurantiaca_ATCC_27029 0
Actinoplanes_sp._N902-109 0
Actinoplanes_sp._SE50/110 1
Actinoplanes_missouriensis_431 0
Gordonia_polyisoprenivorans_VH2 0
Mycobacterium_vanbaalenii_PYR-1 0
Sanguibacter_keddieii_DSM_10542 0
Cellulomonas_flavigena_DSM_20109 1
Rothia_mucilaginosa_DY-18 0
Rothia_dentocariosa_ATCC_17931 0
Sphaerobacter_thermophilus_DSM_20745 0
Herpetosiphon_aurantiacus_DSM_785 1
Clostridium_clariflavum_DSM_19732 0
Desulfitobacterium_hafniense_Y51 1
Desulfotomaculum_acetoxidans_DSM_771 0
Acetobacterium_woodii_DSM_1030 0
Clostridium_difficile_630 1
Clostridium_lentocellum_DSM_5427 1
Clostridium_sp._BNL1100 0
Clostridium_beijerinckii_NCIMB_8052 1
Clostridium_perfringens_ATCC_13124 1
Clostridium_cellulovorans_743B 1
Clostridium_botulinum_A_str._ATCC_3502 1
Clostridium_acetobutylicum_ATCC_824 1
Streptococcus_sp._I-P16 1
Brevibacillus_brevis_NBRC_100599 1
Paenibacillus_sp._JDR-2 0
Paenibacillus_mucilaginosus_3016 0
Bacillus_sp._1NLA3E 1
Bacillus_pumilus_SAFR-032 1
Pelodictyon_phaeoclathratiforme_BU-1 1
Chlorobium_chlorochromatii_CaD3 0
Chlorobium_phaeobacteroides_DSM_266 1
Chlorobium_phaeovibrioides_DSM_265 0
Chlorobium_limicola_DSM_245 1
Chlorobium_tepidum_TLS 1
Chloroherpeton_thalassium_ATCC_35110 0
Prosthecochloris_aestuarii_DSM_271 0
Fibrella_aestuarina 0
Dyadobacter_fermentans_DSM_18053 0
Spirosoma_linguale_DSM_74 0
Alistipes_finegoldii_DSM_17242 1
Solitalea_canadensis_DSM_3403 1
Flavobacterium_johnsoniae_UW101 1
Planctomyces_brasiliensis_DSM_5305 1
Rhodopirellula_baltica_SH_1 1
Treponema_succinifaciens_DSM_2489 0
Spirochaeta_africana_DSM_8902 0
Candidatus_Chloracidobacterium_thermophilum_B 0
Granulicella_tundricola_MP5ACTX9 0
Sebaldella_termitidis_ATCC_33386 1
Helicobacter_cinaedi_PAGU611 1
Syntrophus_aciditrophicus_SB 0
Syntrophobacter_fumaroxidans_MPOB 1
Desulfurivibrio_alkaliphilus_AHT2 0
Desulfotalea_psychrophila_LSv54 0
Desulfobulbus_propionicus_DSM_2032 0
Desulfatibacillum_alkenivorans_AK-01 1
Desulfobacterium_autotrophicum_HRM2 0
Desulfovibrio_piezophilus 0
Desulfovibrio_aespoeensis_Aspo-2 0
Desulfovibrio_salexigens_DSM_2638 0
Geobacter_sp._M21 0
Geobacter_uraniireducens_Rf4 0
Geobacter_sulfurreducens_KN400 0
Geobacter_metallireducens_GS-15 0
Sorangium_cellulosum_'So_ce_56' 1
Anaeromyxobacter_dehalogenans_2CP-1 0
Stigmatella_aurantiaca_DW4/3-1 1
Corallococcus_coralloides_DSM_2259 1
Myxococcus_xanthus_DK_1622 0
Myxococcus_fulvus_HW-1 1
Ralstonia_pickettii_12D 1
Burkholderia_sp._RPE64 0
Burkholderia_thailandensis_E264 0
Polaromonas_naphthalenivorans_CJ2 0
Variovorax_paradoxus_S110 0
Janthinobacterium_sp._Marseille 1
Taylorella_asinigenitalis_MCE3 0
Methylotenera_versatilis_301 0
Magnetococcus_marinus_MC-1 0
Parvularcula_bermudensis_HTCC2503 0
Brevundimonas_subvibrioides_ATCC_15264 0
Caulobacter_sp._K31 1
Caulobacter_crescentus_NA1000 1
Caulobacter_segnis_ATCC_21756 1
Phenylobacterium_zucineum_HLK1 1
Erythrobacter_litoralis_HTCC2594 0
Maricaulis_maris_MCS10 0
Hyphomonas_neptunium_ATCC_15444 1
Phaeobacter_gallaeciensis_2.10 0
Pseudovibrio_sp._FO-BEG1 0
Jannaschia_sp._CCS1 0
Roseobacter_litoralis_Och_149 0
Roseobacter_denitrificans_OCh_114 0
Paracoccus_denitrificans_PD1222 1
Magnetospirillum_magneticum_AMB-1 1
Rhodospirillum_centenum_SW 0
Azospirillum_lipoferum_4B 0
Azospirillum_sp._B510 0
Azospirillum_brasilense_Sp245 1
Granulibacter_bethesdensis_CGDNIH1 0
Micavibrio_aeruginosavorus_ARL-13 1
Candidatus_Midichloria_mitochondrii_IricVA 0
Neorickettsia_sennetsu_str._Miyayama 0
Neorickettsia_risticii_str._Illinois 0
Ehrlichia_ruminantium_str._Gardel 0
Anaplasma_phagocytophilum_HZ 0
Anaplasma_marginale_str._Florida 0
Anaplasma_centrale_str._Israel 0
Orientia_tsutsugamushi_str._Boryong 0
Rickettsia_canadensis_str._McKiel 0
Rickettsia_typhi_str._Wilmington 0
Rickettsia_prowazekii_str._BuV67-CWPP 0
Rickettsia_philipii_str._364D 0
Rickettsia_heilongjiangensis_054 0
Rickettsia_peacockii_str._Rustic 0
Rickettsia_felis_URRWXCal2 0
Rickettsia_slovaca_13-B 0
Rickettsia_parkeri_str._Portsmouth 0
Rickettsia_massiliae_MTU5 0
Rickettsia_japonica_YH 1
Rickettsia_africae_ESF-5 0
Rickettsia_rhipicephali_str._3-7-female6-CWPP 0
Rickettsia_montanensis_str._OSU_85-930 0
Candidatus_Rickettsia_amblyommii_str._GAT-30V 0
Rickettsia_australis_str._Cutlack 0
Rickettsia_akari_str._Hartford 0
Rickettsia_rickettsii_str._'Sheila_Smith' 0
Rickettsia_conorii_str._Malish_7 0
Methylobacterium_chloromethanicum_CM4 0
Methylobacterium_extorquens_AM1 3
Methylobacterium_sp._4-46 1
Methylobacterium_populi_BJ001 0
Methylobacterium_nodulans_ORS_2060 1
Methylobacterium_radiotolerans_JCM_2831 0
Sinorhizobium_fredii_NGR234 1
Sinorhizobium_medicae_WSM419 1
Sinorhizobium_meliloti_AK83 1
Rhizobium_etli_CIAT_652 1
Rhizobium_leguminosarum_bv._viciae_3841 2
Agrobacterium_radiobacter_K84 0
Methylocella_silvestris_BL2 0
Hyphomicrobium_sp._MC1 0
Bradyrhizobium_japonicum_USDA_110 0
Saccharophagus_degradans_2-40 0
Cellvibrio_japonicus_Ueda107 0
Aeromonas_salmonicida_subsp._salmonicida_A449 1
Vibrio_parahaemolyticus_RIMD_2210633 0
Vibrio_splendidus_LGP32 0
Shewanella_piezotolerans_WP3 0
Shewanella_halifaxensis_HAW-EB4 0
Shewanella_pealeana_ATCC_700345 0
Shewanella_woodyi_ATCC_51908 0
Shewanella_violacea_DSS12 0
Colwellia_psychrerythraea_34H 0
Alteromonas_sp._SN2 0
Kangiella_koreensis_DSM_16069 0
Marinomonas_mediterranea_MMB-1 0
Nitrosococcus_watsonii_C-113 1
Coxiella_burnetii_Dugway_5J108-111 0
Legionella_longbeachae_NSW150 0
Legionella_pneumophila_str._Corby 0
Photorhabdus_asymbiotica 0
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 1
Yersinia_pseudotuberculosis_IP_31758 2
Yersinia_pestis_Pestoides_F 0
Serratia_sp._ATCC_39006 0
Serratia_proteamaculans_568 0
Sodalis_glossinidius_str._'morsitans' 1
Pantoea_sp._At-9b 0
Pantoea_vagans_C9-1 0
Erwinia_sp._Ejp617 1
Erwinia_pyrifoliae_Ep1/96 1
Erwinia_amylovora_ATCC_49946 0
Candidatus_Hamiltonella_defensa_5AT_(Acyrthosiphon_pisum) 0
Shigella_sonnei_Ss046 0
Shigella_flexneri_5_str._8401 0
Shigella_boydii_CDC_3083-94 1
Salmonella_bongori_NCTC_12419 0
Enterobacter_aerogenes_KCTC_2190 0
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 1
Enterobacter_sp._R4-368 0
Citrobacter_rodentium_ICC168 0
Pseudomonas_syringae_pv._tomato_str._DC3000 0
Psychrobacter_sp._G 1
Psychrobacter_sp._PRwf-1 1
Psychrobacter_arcticus_273-4 1
Psychrobacter_cryohalolentis_K5 1
Methanosaeta_harundinacea_6Ac 2
Methanosaeta_concilii_GP6 0
Methanosarcina_acetivorans_C2A 0
Methanosarcina_barkeri_str._Fusaro 1
Methanocorpusculum_labreanum_Z 1
Thermococcus_gammatolerans_EJ3 0
Halogeometricum_borinquense_DSM_11551 1
Haloarcula_hispanica_ATCC_33960 0
Haloarcula_marismortui_ATCC_43049 0
Halobacterium_salinarum_R1 0
Halobacterium_sp._NRC-1 0
Methanocaldococcus_sp._FS406-22 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   0
Paracoccidioides_brasiliensis_Pb03_ 0
Coccidioides_posadasii_str._Silveira_ 1
Coccidioides_immitis_RMSCC_3703_ 1
Coccidioides_immitis_RMSCC_2394_ 1
Ajellomyces_dermatitidis_ER-3_ 0
Histoplasma_capsulatum_H143 0
Histoplasma_capsulatum_H88 0
Histoplasma_capsulatum_G186AR 0
Aspergillus_fumigatus_A1163_ 1
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   0
Hordeum_vulgare_22   (Domesticated barley)   1
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0
Neospora_caninum_Nc-Liverpool_6.2 0
Plasmodium_falciparum_HB3_ 0
Plasmodium_falciparum_Dd2_ 1
Chroococcidiopsis_thermalis_PCC_7203 0
Chamaesiphon_minutus_PCC_6605 3
Synechocystis_sp._PCC_6803_substr._PCC-P 1
Synechocystis_sp._PCC_6803_substr._PCC-N 1
Synechocystis_sp._PCC_6803_substr._GT-I 1
Synechocystis_sp._PCC_6803 1
Cyanobium_gracile_PCC_6307 0
Synechococcus_sp._JA-2-3B'a(2-13) 0
Synechococcus_sp._JA-3-3Ab 0
Synechococcus_sp._PCC_7002 0
Crinalium_epipsammum_PCC_9333 1
Oscillatoria_nigro-viridis_PCC_7112 2
Oscillatoria_acuminata_PCC_6304 4
Arthrospira_platensis_NIES-39 1
Cyanothece_sp._PCC_7822 6
Cyanothece_sp._PCC_7425 1
Cyanothece_sp._PCC_7424 6
Cyanothece_sp._ATCC_51142 4
Cyanothece_sp._PCC_8801 4
Cyanobacterium_aponinum_PCC_10605 4
Cyanobacterium_stanieri_PCC_7202 3
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 2
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 3
Stanieria_cyanosphaera_PCC_7437 1
Calothrix_parietina_Calothrix_sp._PCC_6303 3
Cylindrospermum_stagnale_PCC_7417 2
Anabaena_cylindrica_PCC_7122 2
Mycoplasma_leachii_PG50 0
Frankia_sp._EuI1c 0
Frankia_sp._CcI3 0
Nocardiopsis_alba_ATCC_BAA-2165 1
Streptomyces_davawensis_JCM_4913 1
Streptomyces_collinus_Tu_365 1
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 0
Saccharothrix_espanaensis_DSM_44229 0
Amycolatopsis_orientalis_HCCB10007 0
Actinoplanes_friuliensis_DSM_7358 2
Nocardia_brasiliensis_ATCC_700358 1
Mycobacterium_tuberculosis_EAI5/NITR206 0
Mycobacterium_tuberculosis_CAS/NITR204 0
Mycobacterium_tuberculosis_CCDC5180 0
Mycobacterium_tuberculosis_H37Ra 0
Mycobacterium_tuberculosis_H37Rv 0
Mycobacterium_kansasii_ATCC_12478 0
Corynebacterium_diphtheriae_C7_(beta) 1
Bifidobacterium_longum_subsp._infantis_157F 1
Actinomyces_odontolyticus_ATCC_17982 0
Desulfitobacterium_hafniense_DCB-2 1
Clostridium_difficile_BI1 1
Clostridium_difficile_R20291 1
Clostridium_difficile_CD196 1
Clostridium_saccharobutylicum_DSM_13864 1
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 1
Clostridium_perfringens_SM101 1
Clostridium_perfringens_str._13 1
Clostridium_botulinum_H04402_065 1
Clostridium_botulinum_F_str._230613 1
Clostridium_botulinum_F_str._Langeland 1
Clostridium_botulinum_E3_str._Alaska_E43 1
Clostridium_botulinum_B1_str._Okra 1
Clostridium_botulinum_Ba4_str._657 1
Clostridium_botulinum_A2_str._Kyoto 1
Clostridium_botulinum_A3_str._Loch_Maree 1
Clostridium_botulinum_A_str._Hall 1
Clostridium_botulinum_A_str._ATCC_19397 1
Clostridium_acetobutylicum_DSM_1731 1
Clostridium_acetobutylicum_EA_2018 1
Lactobacillus_reuteri_I5007 0
Streptococcus_suis_JS14 1
Streptococcus_salivarius_JIM8777 1
Paenibacillus_mucilaginosus_KNP414 0
Paenibacillus_mucilaginosus_K02 0
Listeria_monocytogenes_M7 1
Listeria_monocytogenes_SLCC2479 1
Listeria_monocytogenes_SLCC2540 1
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 1
Listeria_monocytogenes_L99 1
Listeria_monocytogenes_HCC23 1
Listeria_monocytogenes_J0161 1
Listeria_monocytogenes_FSL_R2-561 3
Chlorobium_phaeobacteroides_BS1 0
Singulisphaera_acidiphila_DSM_18658 1
Campylobacter_jejuni_Waterborne_C.jejuni_Outbreak 1
Desulfocapsa_sulfexigens_DSM_10523 0
Desulfobacula_toluolica_Tol2 0
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 2
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 0
Desulfovibrio_desulfuricans_ND132 0
Sorangium_cellulosum_So0157-2 4
Anaeromyxobacter_dehalogenans_2CP-C 0
Myxococcus_stipitatus_DSM_14675 2
Pandoraea_pnomenusa_3kgm 0
Burkholderia_sp._YI23 0
Burkholderia_sp._KJ006 1
Burkholderia_pseudomallei_NCTC_13179 1
Variovorax_paradoxus_B4 0
Variovorax_paradoxus_EPS 0
Taylorella_asinigenitalis_14/45 0
Taylorella_equigenitalis_14/56 0
Bordetella_parapertussis_Bpp5 2
Bordetella_bronchiseptica_253 1
Caulobacter_crescentus_CB15 1
Phaeobacter_gallaeciensis_DSM_26640 0
Magnetospirillum_gryphiswaldense_MSR-1_v2 1
Micavibrio_aeruginosavorus_EPB 1
Anaplasma_phagocytophilum_str._Dog2 0
Anaplasma_phagocytophilum_str._HZ2 0
Anaplasma_phagocytophilum_str._JM 0
Anaplasma_marginale_str._Dawn 0
Anaplasma_marginale_str._Gypsy_Plains 0
Orientia_tsutsugamushi_str._Ikeda 0
Rickettsia_canadensis_str._CA410 0
Rickettsia_typhi_str._B9991CWPP 0
Rickettsia_typhi_str._TH1527 0
Rickettsia_prowazekii_str._Breinl 0
Rickettsia_prowazekii_str._NMRC_Madrid_E 0
Rickettsia_prowazekii_str._RpGvF24 0
Rickettsia_prowazekii_str._GvV257 0
Rickettsia_prowazekii_str._Katsinyian 0
Rickettsia_prowazekii_str._Chernikova 0
Rickettsia_prowazekii_Rp22 0
Rickettsia_prowazekii_str._Madrid_E 0
Rickettsia_slovaca_str._D-CWPP 0
Rickettsia_massiliae_str._AZT80 0
Rickettsia_rickettsii_str._Arizona 0
Rickettsia_rickettsii_str._Brazil 0
Rickettsia_rickettsii_str._Hauke 0
Rickettsia_rickettsii_str._Colombia 0
Rickettsia_rickettsii__str._Hlp#2 0
Rickettsia_rickettsii_str._Hino 0
Rickettsia_rickettsii_str._Iowa 0
Methylobacterium_extorquens_DM4 0
Methylobacterium_extorquens_PA1 0
Sinorhizobium_meliloti_2011 1
Sinorhizobium_meliloti_GR4 1
Sinorhizobium_meliloti_Rm41 1
Sinorhizobium_meliloti_SM11 1
Sinorhizobium_meliloti_BL225C 1
Sinorhizobium_meliloti_1021 1
Rhizobium_tropici_CIAT_899 1
Rhizobium_leguminosarum_bv._trifolii_WSM1325 1
Hyphomicrobium_nitrativorans_NL23 0
Rhodopseudomonas_palustris_DX-1 1
Rhodopseudomonas_palustris_HaA2 1
Rhodopseudomonas_palustris_CGA009 0
Bradyrhizobium_oligotrophicum_S58 0
Bradyrhizobium_japonicum_USDA_6 0
Pasteurella_multocida_36950 0
Pasteurella_multocida_subsp._multocida_str._HN06 0
Haemophilus_influenzae_R2846 0
Thioalkalivibrio_nitratireducens_DSM_14787 0
Coxiella_burnetii_CbuK_Q154 0
Coxiella_burnetii_CbuG_Q212 0
Coxiella_burnetii_RSA_331 0
Coxiella_burnetii_RSA_493 0
Legionella_pneumophila_str._Paris 0
Legionella_pneumophila_str._Lens 0
Legionella_pneumophila_subsp._pneumophila_LPE509 0
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 0
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 0
Legionella_pneumophila_subsp._pneumophila 0
Legionella_pneumophila_subsp._pneumophila 0
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 0
Legionella_pneumophila_2300/99_Alcoy 0
Yersinia_pseudotuberculosis_PB1/+ 1
Yersinia_pseudotuberculosis_YPIII 0
Yersinia_pseudotuberculosis_IP_32953 0
Yersinia_pestis_biovar_Microtus_str._91001 0
Yersinia_pestis_A1122 0
Yersinia_pestis_Z176003 0
Yersinia_pestis_D182038 0
Yersinia_pestis_D106004 0
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 0
Yersinia_pestis_Nepal516 0
Yersinia_pestis_Antiqua 0
Yersinia_pestis_CO92 0
Yersinia_pestis_KIM10+ 0
Serratia_liquefaciens_ATCC_27592 1
Pantoea_ananatis_LMG_5342 0
Pantoea_ananatis_PA13 1
Pantoea_ananatis_AJ13355 0
Erwinia_amylovora_CFBP1430 1
Cronobacter_sakazakii_CMCC_45402 1
Shigella_sonnei_53G 1
Shigella_flexneri_2002017 0
Shigella_flexneri_2a_str._2457T 0
Shigella_flexneri_2a_str._301 0
Shigella_boydii_Sb227 2
Salmonella_bongori_N268-08 0
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 0
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 0
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 0
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 0
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 0
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 0
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 0
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 0
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 0
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 0
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 0
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 0
Salmonella_enterica_serovar_Bovismorbificans_genomics 0
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 0
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 0
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 0
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 0
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 0
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 0
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 0
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 0
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 0
Escherichia_coli_E24377A 0
Escherichia_coli_LY180 1
Escherichia_coli_APEC_O78 1
Escherichia_coli_O7:K1_str._CE10 0
Escherichia_coli_O104:H4_str._2009EL-2050 1
Escherichia_coli_O104:H4_str._2009EL-2071 1
Escherichia_coli_O104:H4_str._2011C-3493 1
Escherichia_coli_P12b 1
Escherichia_coli_042 0
Escherichia_coli_Xuzhou21 0
Escherichia_coli_UMNK88 1
Escherichia_coli_KO11FL 0
Escherichia_coli_KO11FL 0
Escherichia_coli_IAI39 0
Escherichia_coli_UMN026 0
Escherichia_coli_55989 1
Escherichia_coli_S88 0
Escherichia_coli_IAI1 1
Escherichia_coli_W 1
Escherichia_coli_W 1
Escherichia_coli_DH1 1
Escherichia_coli_DH1 1
Escherichia_coli_ATCC_8739 0
Escherichia_coli_BL21(DE3) 1
Escherichia_coli_BL21(DE3) 1
Escherichia_coli_SMS-3-5 0
Escherichia_coli_SE11 1
Escherichia_coli_O103:H2_str._12009 0
Escherichia_coli_HS 1
Escherichia_coli_ETEC_H10407 0
Escherichia_coli_O55:H7_str._RM12579 0
Escherichia_coli_O55:H7_str._CB9615 0
Escherichia_coli_O26:H11_str._11368 0
Escherichia_coli_O111:H-_str._11128 0
Escherichia_coli_O127:H6_str._E2348/69 1
Escherichia_coli_O157:H7_str._TW14359 0
Escherichia_coli_O157:H7_str._EC4115 0
Escherichia_coli_O157:H7_str._Sakai 0
Escherichia_coli_O157:H7_str._EDL933 0
Escherichia_coli_str._K-12_substr._MDS42 1
Escherichia_coli_BW2952 0
Escherichia_coli_str._K-12_substr._MG1655 0
Escherichia_coli_str._K-12_substr._W3110 1
Escherichia_coli_str._K-12_substr._DH10B 1
Escherichia_coli_B_str._REL606 1
Pseudomonas_aeruginosa_B136-33 0
Acinetobacter_baumannii__ATCC_19606 1
Methylophaga_sp._JAM7 0
Sulfolobus_acidocaldarius_SUSAZ 0
Methanolobus_psychrophilus_R15 0
Archaeoglobus_sulfaticallidus_PM70-1 0
Thermococcus_sp._CL1 0
Thermococcus_litoralis_DSM_5473 0
Natrinema_pellirubrum_DSM_15624 0
Haloquadratum_walsbyi_C23 0
Halorhabdus_tiamatea_SARL4B 0

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   0
Pan_troglodytes_69_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_69_3.1   (Western gorilla)   0
Pongo_abelii_69_2   (Sumatran orangutan)   0
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   0
Macaca_mulatta_69_1   (Rhesus monkey)   0
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   0
Otolemur_garnettii_69_3   (Small-eared galago)   0
Microcebus_murinus_69_1   (Gray mouse lemur)   0
Rattus_norvegicus_69_3.4   (Norway rat)   0
Mus_musculus_69_38   (House mouse)   0
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   0
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   0
Cavia_porcellus_69_3   (Domestic guinea pig)   0
Oryctolagus_cuniculus_69_2   (Rabbit)   0
Ochotona_princeps_69   (American pika)   0
Tupaia_belangeri_69   (Northern tree shrew)   0
Sus_scrofa_69_10.2   (Pig)   0
Bos_taurus_69_3.1   (Cattle)   0
Vicugna_pacos_69_1   (Alpaca)   0
Tursiops_truncatus_69_1   (Bottlenose dolphin)   0
Mustela_putorius_furo_69_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_69_1   (Giant panda)   0
Canis_familiaris_69_3.1   (Dog)   0
Felis_catus_69   (Domestic cat)   0
Equus_caballus_69_2   (Horse)   0
Myotis_lucifugus_69_2.0   (Little brown bat)   0
Pteropus_vampyrus_69_1   (Large flying fox)   0
Sorex_araneus_69_1   (European shrew)   0
Erinaceus_europaeus_69   (Western European hedgehog)   0
Procavia_capensis_69_1   (Cape rock hyrax)   0
Loxodonta_africana_69_3   (African savanna elephant)   0
Echinops_telfairi_69   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   0
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   0
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   0
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   0
Ornithorhynchus_anatinus_69_5   (Platypus)   0
Petromyzon_marinus_69_7.0   (Sea lamprey)   0
Meleagris_gallopavo_69_2   (Turkey)   0
Gallus_gallus_69_2   (Chicken)   0
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   0
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   0
Anolis_carolinensis_69_2.0   (Green anole)   0
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   0
Latimeria_chalumnae_69_1   (Coelacanth)   0
Gadus_morhua_69_1   (Atlantic cod)   0
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   0
Takifugu_rubripes_69_4   (Torafugu)   0
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   0
Oryzias_latipes_69_1   (Japanese medaka)   0
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   0
Oreochromis_niloticus_69_1.0   (Nile tilapia)   0
Danio_rerio_69_9   (Zebrafish)   0
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   1

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   0
Homo_sapiens__(NCBI_version)   (Human)   0
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   0
Picea_sitchensis__(Incomplete)   (Sitka spruce)   0
Malus_x_domestica_(Duplicate)   (Apple)   2
Ricinus_communis__(Early_assembly)   (Castor bean)   0
Nicotiana_benthamiana_0.4.4_(Early_draft) 1
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   0
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   0
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 0
NCBI_plasmid_sequences_(Plasmids) 17
TargetDB__(Targets) 1
NCBI_viral_sequences_(Viral) 39
Protozoadb_2010_08_(Protozoadb) 2
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 7
STRING_v9.0.5_(STRING) 149
Protein_Data_Bank_(all_PDB_sequenc) 4
Uniprot_2018_03_genome 7668
UniProt__viral_sequences_(Viral) 12
NCBI_2017_08_genome 9024

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