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Domain combinations for 46689,48295,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

46689 - Homeodomain-like
48295 - TrpR-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Slackia_heliotrinireducens_DSM_20476 2
Segniliparus_rotundus_DSM_44985 0
Corynebacterium_jeikeium_K411 1
Bifidobacterium_dentium_Bd1 5
Bifidobacterium_adolescentis_ATCC_15703 1
Clostridium_cellulolyticum_H10 10
Desulfitobacterium_dehalogenans_ATCC_51507 1
Clostridium_lentocellum_DSM_5427 2
Enterococcus_faecium_Aus0004 1
Lactobacillus_ruminis_ATCC_27782 5
Polynucleobacter_necessarius_subsp._asymbioticus_QLW-P1DMWA-1 2
Acidovorax_sp._KKS102 1
Asticcacaulis_excentricus_CB_48 2
Pantoea_sp._At-9b 1
Shigella_sonnei_Ss046 1
Shigella_flexneri_5_str._8401 9
Shigella_dysenteriae_Sd197 1
Klebsiella_pneumoniae_NTUH-K2044 4
Enterobacter_aerogenes_KCTC_2190 2
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 2
Psychrobacter_sp._PRwf-1 4

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Strains
Genome     Number
Bifidobacterium_longum_subsp._longum_BBMN68 1
Actinomyces_graevenitzii_C83_ 1
Clostridium_difficile_BI1 0
Clostridium_difficile_R20291 0
Clostridium_difficile_CD196 0
Enterococcus_faecium_Aus0085 2
Enterococcus_faecium_DO 4
Lactobacillus_johnsonii_N6.2 1
Paenibacillus_larvae_subsp._larvae_DSM_25430 2
Actinobacillus_pleuropneumoniae_serovar_7_str._AP76 3
Shigella_sonnei_53G 1
Shigella_flexneri_2002017 8
Shigella_flexneri_2a_str._2457T 5
Shigella_flexneri_2a_str._301 9
Shigella_dysenteriae_1617 1
Klebsiella_pneumoniae_JM45 1
Klebsiella_pneumoniae_CG43 2
Klebsiella_pneumoniae_KCTC_2242 6
Klebsiella_pneumoniae_subsp._pneumoniae_1084 4
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 3
Escherichia_coli_B_str._REL606 1

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Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 16
STRING_v9.0.5_(STRING) 63
Uniprot_2018_03_genome 2478
NCBI_2017_08_genome 1783
TargetDB__(Targets) 8

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