SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 46689,53098 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

46689 - Homeodomain-like
53098 - Ribonuclease H-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   1
Caenorhabditis_japonica_ 1
Thelohanellus_kitauei 7
Amphimedon_queenslandica 2
Rhizopus_oryzae_RA_99-880_ 0
Sporisorium_reilianum_22 1
Ustilago_maydis_ 0
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 3
Sphaerobolus_stellatus_v1.0 1
Tulasnella_calospora_AL13/4D_v1.0 1
Fusarium_graminearum_ 1
Botrytis_cinerea_B05.10_ 1
Penicillium_chrysogenum_Wisconsin_54-1255_ 2
Penicillium_chrysogenum_v1.0 1
Aspergillus_fumigatus_Af293 1
Aspergillus_carbonarius_ITEM_5010_ 1
Aspergillus_terreus_NIH2624_ 1
Aspergillus_oryzae_RIB40_ 3
Aspergillus_niger_22 5
Tuber_melanosporum_Vittad_   (Perigord truffle)   2
Fragaria_vesca_   (Wild strawberry)   1
Phytophthora_sojae_1.1 1
Leptolyngbya_sp._PCC_7376 33
Acaryochloris_marina_MBIC11017 0
Thermosynechococcus_elongatus_BP-1 12
Microcoleus_sp._PCC_7113 0
Cyanothece_sp._PCC_8802 2
Microcystis_aeruginosa_NIES-843 8
Rivularia_sp._PCC_7116 0
Anabaena_variabilis_ATCC_29413 0
Nostoc_sp._PCC_7107 0
Nostoc_punctiforme_PCC_73102 1
Nostoc_sp._PCC_7120 0
Nostoc_sp._PCC_7524 1
Mycoplasma_bovis_HB0801 3
Conexibacter_woesei_DSM_14684 3
Slackia_heliotrinireducens_DSM_20476 0
Nakamurella_multipartita_DSM_44233 6
Modestobacter_marinus 5
Blastococcus_saxobsidens_DD2 0
Geodermatophilus_obscurus_DSM_43160 1
Frankia_symbiont_of_Datisca_glomerata 31
Frankia_sp._EAN1pec 12
Frankia_alni_ACN14a 1
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 2
Streptosporangium_roseum_DSM_43021 3
Kitasatospora_setae_KM-6054 2
Streptomyces_coelicolor_A3(2) 11
Streptomyces_flavogriseus_ATCC_33331 1
Streptomyces_bingchenggensis_BCW-1 6
Streptomyces_violaceusniger_Tu_4113 5
Streptomyces_avermitilis_MA-4680 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 4
Streptomyces_scabiei_87.22 1
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 15
Actinosynnema_mirum_DSM_43827 0
Pseudonocardia_dioxanivorans_CB1190 7
Saccharopolyspora_erythraea_NRRL_2338 3
Amycolatopsis_mediterranei_U32 0
Propionibacterium_propionicum_F0230a 3
Microlunatus_phosphovorus_NM-1 1
Propionibacterium_freudenreichii_subsp._shermanii_CIRM-BIA1 8
Salinispora_arenicola_CNS-205 6
Salinispora_tropica_CNB-440 3
Micromonospora_sp._L5 2
Micromonospora_aurantiaca_ATCC_27029 5
Actinoplanes_sp._N902-109 3
Actinoplanes_sp._SE50/110 5
Actinoplanes_missouriensis_431 5
Gordonia_sp._KTR9 3
Gordonia_bronchialis_DSM_43247 5
Rhodococcus_jostii_RHA1 7
Rhodococcus_opacus_B4 1
Nocardia_farcinica_IFM_10152 3
Mycobacterium_abscessus_ATCC_19977 0
Mycobacterium_sp._JLS 1
Mycobacterium_intracellulare_ATCC_13950 2
Mycobacterium_avium_104 5
Mycobacterium_vanbaalenii_PYR-1 1
Mycobacterium_canettii_CIPT_140010059 1
Mycobacterium_africanum_GM041182 1
Mycobacterium_tuberculosis_KZN_1435 0
Mycobacterium_tuberculosis 1
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 1
Mycobacterium_rhodesiae_NBB3 2
Mycobacterium_gilvum_PYR-GCK 0
Mycobacterium_chubuense_NBB4 6
Mycobacterium_marinum_M 7
Mycobacterium_smegmatis_str._MC2_155 8
Corynebacterium_aurimucosum_ATCC_700975 1
Corynebacterium_urealyticum_DSM_7109 1
Corynebacterium_jeikeium_K411 6
Corynebacterium_variabile_DSM_44702 4
Corynebacterium_glutamicum_R 0
Kytococcus_sedentarius_DSM_20547 3
Leifsonia_xyli_subsp._xyli_str._CTCB07 1
Microbacterium_testaceum_StLB037 3
Intrasporangium_calvum_DSM_43043 1
Brachybacterium_faecium_DSM_4810 1
Isoptericola_variabilis_225 1
Cellulomonas_flavigena_DSM_20109 6
Cellulomonas_fimi_ATCC_484 5
[Cellvibrio]_gilvus_ATCC_13127 6
Arthrobacter_phenanthrenivorans_Sphe3 4
Arthrobacter_arilaitensis_Re117 1
Kocuria_rhizophila_DC2201 5
Arthrobacter_sp._Rue61a 2
Arthrobacter_sp._FB24 2
Micrococcus_luteus_NCTC_2665 5
Bifidobacterium_longum_subsp._longum_JDM301 1
Bifidobacterium_breve_ACS-071-V-Sch8b 0
Bifidobacterium_adolescentis_ATCC_15703 0
Arcanobacterium_haemolyticum_DSM_20595 1
Dehalogenimonas_lykanthroporepellens_BL-DC-9 0
Herpetosiphon_aurantiacus_DSM_785 0
Roseiflexus_sp._RS-1 1
Marinithermus_hydrothermalis_DSM_14884 0
Meiothermus_silvanus_DSM_9946 0
Thermus_scotoductus_SA-01 0
Acidaminococcus_fermentans_DSM_20731 0
Selenomonas_sputigena_ATCC_35185 1
Natranaerobius_thermophilus_JW/NM-WN-LF 0
Symbiobacterium_thermophilum_IAM_14863 1
Clostridium_clariflavum_DSM_19732 0
Clostridium_cellulolyticum_H10 26
Ruminococcus_albus_7 1
Sulfobacillus_acidophilus_DSM_10332 7
Oscillibacter_valericigenes_Sjm18-20 0
Candidatus_Desulforudis_audaxviator_MP104C 0
Thermincola_potens_JR 0
Pelotomaculum_thermopropionicum_SI 3
Desulfosporosinus_orientis_DSM_765 0
Syntrophobotulus_glycolicus_DSM_8271 3
Desulfitobacterium_hafniense_Y51 1
Desulfitobacterium_dehalogenans_ATCC_51507 1
Desulfotomaculum_reducens_MI-1 3
Desulfotomaculum_acetoxidans_DSM_771 20
Desulfotomaculum_kuznetsovii_DSM_6115 1
Desulfotomaculum_carboxydivorans_CO-1-SRB 7
Desulfotomaculum_ruminis_DSM_2154 10
Acetobacterium_woodii_DSM_1030 5
Clostridium_saccharolyticum_WM1 1
Clostridium_lentocellum_DSM_5427 6
Eubacterium_rectale_ATCC_33656 1
Syntrophothermus_lipocalidus_DSM_12680 1
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 1
Heliobacterium_modesticaldum_Ice1 1
Alkaliphilus_metalliredigens_QYMF 0
Mahella_australiensis_50-1_BON 1
Thermosediminibacter_oceani_DSM_16646 5
Caldicellulosiruptor_obsidiansis_OB47 5
Caldicellulosiruptor_kronotskyensis_2002 1
Caldicellulosiruptor_lactoaceticus_6A 6
Caldicellulosiruptor_kristjanssonii_177R1B 6
Caldicellulosiruptor_saccharolyticus_DSM_8903 26
Caldicellulosiruptor_bescii_DSM_6725 5
Thermoanaerobacterium_xylanolyticum_LX-11 1
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 2
Thermodesulfobium_narugense_DSM_14796 0
Carboxydothermus_hydrogenoformans_Z-2901 1
Moorella_thermoacetica_ATCC_39073 1
Ammonifex_degensii_KC4 15
Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 0
Thermoanaerobacter_pseudethanolicus_ATCC_33223 0
Thermoanaerobacter_sp._X514 0
Thermoanaerobacter_wiegelii_Rt8.B1 6
Thermoanaerobacter_brockii_subsp._finnii_Ako-1 0
Halanaerobium_hydrogeniformans 3
Lactobacillus_kefiranofaciens_ZW3 3
Lactobacillus_crispatus_ST1 1
Lactobacillus_fermentum_IFO_3956 4
Lactobacillus_amylovorus_GRL1118 2
Lactobacillus_helveticus_DPC_4571 1
Lactobacillus_buchneri_NRRL_B-30929 7
Lactobacillus_buchneri 2
Lactobacillus_acidophilus_30SC 1
Streptococcus_equi_subsp._equi_4047 0
Streptococcus_pyogenes_str._Manfredo 1
Streptococcus_salivarius_57.I 5
Kyrpidia_tusciae_DSM_2912 3
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 4
Listeria_innocua_Clip11262 0
Geobacillus_thermoglucosidasius_C56-YS93 4
Anoxybacillus_flavithermus_WK1 2
Geobacillus_thermoleovorans_CCB_US3_UF5 7
Geobacillus_kaustophilus_HTA426 6
Geobacillus_sp._GHH01 5
Geobacillus_sp._WCH70 6
Halobacillus_halophilus_DSM_2266 1
Bacillus_halodurans_C-125 3
Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305 2
Candidatus_Cloacamonas_acidaminovorans 1
Pelodictyon_phaeoclathratiforme_BU-1 3
Chlorobium_luteolum_DSM_273 1
Chlorobium_phaeobacteroides_DSM_266 1
Chlorobium_phaeovibrioides_DSM_265 2
Prosthecochloris_aestuarii_DSM_271 4
Haliscomenobacter_hydrossis_DSM_1100 1
Saprospira_grandis_str._Lewin 0
Chitinophaga_pinensis_DSM_2588 10
Candidatus_Amoebophilus_asiaticus_5a2 3
Belliella_baltica_DSM_15883 0
Leadbetterella_byssophila_DSM_17132 1
Dyadobacter_fermentans_DSM_18053 3
Spirosoma_linguale_DSM_74 4
Parabacteroides_distasonis_ATCC_8503 0
Tannerella_forsythia_ATCC_43037 1
Odoribacter_splanchnicus_DSM_20712 1
Bacteroides_vulgatus_ATCC_8482 0
Aequorivita_sublithincola_DSM_14238 1
Ornithobacterium_rhinotracheale_DSM_15997 16
Capnocytophaga_canimorsus_Cc5 1
Weeksella_virosa_DSM_16922 4
Flavobacterium_columnare_ATCC_49512 3
Waddlia_chondrophila_WSU_86-1044 0
Simkania_negevensis_Z 1
Opitutus_terrae_PB90-1 6
Thermovirga_lienii_DSM_17291 12
Turneriella_parva_DSM_21527 9
Spirochaeta_smaragdinae_DSM_11293 2
Treponema_primitia_ZAS-2 3
Treponema_denticola_ATCC_35405 3
Denitrovibrio_acetiphilus_DSM_12809 5
Kosmotoga_olearia_TBF_19.5.1 4
Fervidobacterium_pennivorans_DSM_9078 2
Thermosipho_africanus_TCF52B 25
Desulfurobacterium_thermolithotrophum_DSM_11699 2
Sulfurihydrogenibium_sp._YO3AOP1 0
Sulfurihydrogenibium_azorense_Az-Fu1 13
Persephonella_marina_EX-H1 0
Candidatus_Solibacter_usitatus_Ellin6076 16
Granulicella_tundricola_MP5ACTX9 2
Granulicella_mallensis_MP5ACTX8 3
Acidobacterium_capsulatum_ATCC_51196 0
Candidatus_Nitrospira_defluvii 4
Candidatus_Methylomirabilis_oxyfera 5
Candidatus_Saccharimonas_aalborgensis 1
Acidithiobacillus_ferrivorans_SS3 3
Acidithiobacillus_caldus_SM-1 3
Nitratifractor_salsuginis_DSM_16511 3
Sulfurospirillum_deleyianum_DSM_6946 1
Arcobacter_sp._L 4
Nitratiruptor_sp._SB155-2 4
Desulfarculus_baarsii_DSM_2075 8
Syntrophobacter_fumaroxidans_MPOB 1
Desulfurivibrio_alkaliphilus_AHT2 0
Desulfobulbus_propionicus_DSM_2032 1
Desulfatibacillum_alkenivorans_AK-01 0
Desulfobacterium_autotrophicum_HRM2 2
Desulfovibrio_piezophilus 0
Desulfovibrio_alaskensis_G20 2
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 2
Hippea_maritima_DSM_10411 7
Geobacter_uraniireducens_Rf4 7
Geobacter_lovleyi_SZ 3
Geobacter_bemidjiensis_Bem 9
Geobacter_metallireducens_GS-15 7
Pelobacter_carbinolicus_DSM_2380 11
Haliangium_ochraceum_DSM_14365 0
Sorangium_cellulosum_'So_ce_56' 10
Anaeromyxobacter_sp._Fw109-5 0
Stigmatella_aurantiaca_DW4/3-1 0
Corallococcus_coralloides_DSM_2259 0
Myxococcus_xanthus_DK_1622 0
Myxococcus_fulvus_HW-1 2
Thauera_sp._MZ1T 3
Neisseria_meningitidis_FAM18 9
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 14
Rubrivivax_gelatinosus_IL144 1
Leptothrix_cholodnii_SP-6 3
Burkholderia_rhizoxinica_HKI_454 4
Burkholderia_phytofirmans_PsJN 5
Burkholderia_phymatum_STM815 6
Burkholderia_xenovorans_LB400 8
Cupriavidus_taiwanensis_LMG_19424 0
Cupriavidus_metallidurans_CH34 3
Cupriavidus_necator_N-1 3
Ralstonia_pickettii_12D 0
Burkholderia_sp._RPE64 0
Burkholderia_sp._CCGE1002 3
Burkholderia_ambifaria_AMMD 0
Burkholderia_cenocepacia_HI2424 5
Burkholderia_vietnamiensis_G4 2
Burkholderia_gladioli_BSR3 1
Burkholderia_glumae_BGR1 12
Verminephrobacter_eiseniae_EF01-2 9
Alicycliphilus_denitrificans_K601 1
Delftia_acidovorans_SPH-1 7
Polaromonas_sp._JS666 2
Polaromonas_naphthalenivorans_CJ2 0
Variovorax_paradoxus_S110 3
Acidovorax_ebreus_TPSY 0
Acidovorax_sp._KKS102 3
Acidovorax_sp._JS42 2
Acidovorax_citrulli_AAC00-1 19
Herbaspirillum_seropedicae_SmR1 1
Bordetella_petrii_DSM_12804 0
Bordetella_pertussis_Tohama_I 214
Bordetella_parapertussis_12822 9
Nitrosospira_multiformis_ATCC_25196 6
Nitrosomonas_sp._Is79A3 1
Nitrosomonas_europaea_ATCC_19718 23
Magnetococcus_marinus_MC-1 2
Caulobacter_sp._K31 4
Caulobacter_crescentus_NA1000 3
Erythrobacter_litoralis_HTCC2594 2
Sphingopyxis_alaskensis_RB2256 6
Novosphingobium_sp._PP1Y 1
Novosphingobium_aromaticivorans_DSM_12444 0
Sphingobium_sp._SYK-6 4
Sphingobium_japonicum_UT26S 1
Sphingobium_chlorophenolicum_L-1 2
Sphingomonas_sp._MM-1 0
Sphingomonas_wittichii_RW1 1
Maricaulis_maris_MCS10 1
Hyphomonas_neptunium_ATCC_15444 4
Dinoroseobacter_shibae_DFL_12 0
Phaeobacter_gallaeciensis_2.10 8
Pseudovibrio_sp._FO-BEG1 5
Roseobacter_denitrificans_OCh_114 1
Rhodobacter_sphaeroides_ATCC_17029 5
Magnetospirillum_magneticum_AMB-1 1
Azospirillum_sp._B510 7
Azospirillum_brasilense_Sp245 3
Gluconacetobacter_xylinus_NBRC_3288 1
Gluconacetobacter_diazotrophicus_PAl_5 11
Acidiphilium_multivorum_AIU301 0
Acidiphilium_cryptum_JF-5 0
Gluconobacter_oxydans_621H 23
Acetobacter_pasteurianus_IFO_3283-01 2
Polymorphum_gilvum_SL003B-26A1 9
Wolbachia_sp._wRi 5
Rickettsia_massiliae_MTU5 2
Xanthobacter_autotrophicus_Py2 0
Azorhizobium_caulinodans_ORS_571 3
Methylobacterium_chloromethanicum_CM4 0
Methylobacterium_sp._4-46 6
Methylobacterium_populi_BJ001 1
Methylobacterium_nodulans_ORS_2060 7
Ochrobactrum_anthropi_ATCC_49188 3
Brucella_microti_CCM_4915 1
Brucella_pinnipedialis_B2/94 2
Brucella_suis_ATCC_23445 1
Sinorhizobium_fredii_NGR234 6
Sinorhizobium_medicae_WSM419 3
Sinorhizobium_meliloti_AK83 4
Rhizobium_leguminosarum_bv._viciae_3841 1
Agrobacterium_sp._H13-3 0
Agrobacterium_vitis_S4 3
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 0
Pelagibacterium_halotolerans_B2 1
Rhodomicrobium_vannielii_ATCC_17100 28
Rhodopseudomonas_palustris_BisA53 0
Nitrobacter_winogradskyi_Nb-255 12
Nitrobacter_hamburgensis_X14 3
Bradyrhizobium_japonicum_USDA_110 15
Bradyrhizobium_sp._ORS_278 2
Bartonella_tribocorum_CIP_105476 0
Aggregatibacter_actinomycetemcomitans_D7S-1 2
Gallibacterium_anatis_UMN179 0
Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 1
Aeromonas_veronii_B565 0
Aeromonas_salmonicida_subsp._salmonicida_A449 6
Aliivibrio_salmonicida_LFI1238 0
Vibrio_fischeri_MJ11 0
Vibrio_harveyi_ATCC_BAA-1116 44
Vibrio_splendidus_LGP32 0
Vibrio_furnissii_NCTC_11218 1
Vibrio_cholerae_O395 3
Photobacterium_profundum_SS9 10
Psychromonas_ingrahamii_37 5
Idiomarina_loihiensis_L2TR 1
Shewanella_piezotolerans_WP3 1
Shewanella_halifaxensis_HAW-EB4 0
Shewanella_sediminis_HAW-EB3 2
Shewanella_denitrificans_OS217 1
Shewanella_oneidensis_MR-1 50
Shewanella_baltica_OS185 10
Shewanella_woodyi_ATCC_51908 1
Shewanella_frigidimarina_NCIMB_400 1
Shewanella_putrefaciens_CN-32 1
Glaciecola_sp._4H-3-7+YE-5 1
Marinobacter_aquaeolei_VT8 1
Alteromonas_sp._SN2 0
Alteromonas_macleodii_str._'Deep_ecotype' 0
Marinomonas_mediterranea_MMB-1 1
Methylomicrobium_alcaliphilum 0
Methylomonas_methanica_MC09 9
Methylococcus_capsulatus_str._Bath 3
Rhodanobacter_denitrificans 0
Stenotrophomonas_maltophilia_K279a 5
Xanthomonas_oryzae_pv._oryzae_PXO99A 2
Halothiobacillus_neapolitanus_c2 0
Alkalilimnicola_ehrlichii_MLHE-1 0
Thioalkalivibrio_sulfidophilus_HL-EbGr7 2
Thioalkalivibrio_sp._K90mix 3
Allochromatium_vinosum_DSM_180 1
Thiocystis_violascens_DSM_198 1
Nitrosococcus_halophilus_Nc4 7
Legionella_pneumophila_str._Corby 2
Photorhabdus_asymbiotica 5
Photorhabdus_luminescens_subsp._laumondii_TTO1 49
Xenorhabdus_bovienii_SS-2004 35
Xenorhabdus_nematophila_ATCC_19061 24
Providencia_stuartii_MRSN_2154 1
Edwardsiella_tarda_EIB202 11
Yersinia_pestis_Pestoides_F 27
Serratia_sp._AS12 0
Serratia_sp._ATCC_39006 1
Serratia_plymuthica_AS9 0
Serratia_proteamaculans_568 1
Dickeya_dadantii_Ech703 4
Dickeya_zeae_Ech1591 1
Pectobacterium_sp._SCC3193 1
Pantoea_sp._At-9b 0
Erwinia_sp._Ejp617 1
Erwinia_pyrifoliae_Ep1/96 1
Enterobacteriaceae_bacterium_strain_FGI_57 3
Shigella_sonnei_Ss046 22
Shigella_flexneri_5_str._8401 1
Shigella_boydii_CDC_3083-94 1
Klebsiella_oxytoca_E718 1
Enterobacter_sp._638 5
Enterobacter_cloacae_subsp._dissolvens_SDM 1
Azotobacter_vinelandii_DJ 12
Pseudomonas_sp._TKP 8
Pseudomonas_entomophila_L48 3
Pseudomonas_syringae_pv._tomato_str._DC3000 23
Pseudomonas_fulva_12-X 1
Pseudomonas_putida_F1 1
Pseudomonas_fluorescens_SBW25 4
Francisella_philomiragia_subsp._philomiragia_ATCC_25017 43
Francisella_tularensis_subsp._tularensis_WY96-3418 48
Francisella_cf._novicida_3523 1
Sulfolobus_solfataricus_P2 3
Methanosaeta_concilii_GP6 2
Methanosarcina_acetivorans_C2A 17
Archaeoglobus_veneficus_SNP6 5
Archaeoglobus_fulgidus_DSM_4304 4
Pyrococcus_yayanosii_CH1 1
Pyrococcus_furiosus_COM1 12
Natrialba_magadii_ATCC_43099 1
Methanotorris_igneus_Kol_5 5

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   0
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   1
Chroococcidiopsis_thermalis_PCC_7203 1
Cyanobium_gracile_PCC_6307 5
Crinalium_epipsammum_PCC_9333 0
Oscillatoria_acuminata_PCC_6304 0
Cyanothece_sp._PCC_7822 0
Cyanothece_sp._PCC_7424 6
Cyanothece_sp._ATCC_51142 0
Cyanothece_sp._PCC_8801 3
Stanieria_cyanosphaera_PCC_7437 0
Anabaena_cylindrica_PCC_7122 1
Mycoplasma_bovis_Hubei-1 3
Mycoplasma_bovis_PG45 6
Frankia_sp._EuI1c 2
Frankia_sp._CcI3 2
Nocardiopsis_alba_ATCC_BAA-2165 2
Streptomyces_albus_J1074 0
Streptomyces_rapamycinicus_NRRL_5491 3
Streptomyces_davawensis_JCM_4913 5
Streptomyces_fulvissimus_DSM_40593 4
Streptomyces_collinus_Tu_365 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 5
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 15
Saccharothrix_espanaensis_DSM_44229 2
Amycolatopsis_mediterranei_RB 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_orientalis_HCCB10007 3
Propionibacterium_avidum_44067 1
Propionibacterium_acidipropionici_ATCC_4875 2
Actinoplanes_friuliensis_DSM_7358 1
Rhodococcus_pyridinivorans_SB3094 2
Mycobacterium_sp._MOTT36Y 4
Mycobacterium_abscessus_subsp._bolletii_50594 1
Mycobacterium_sp._KMS 5
Mycobacterium_sp._MCS 6
Mycobacterium_yongonense_05-1390 2
Mycobacterium_indicus_pranii_MTCC_9506 0
Mycobacterium_intracellulare_MOTT-02 2
Mycobacterium_avium_subsp._paratuberculosis_MAP4 10
Mycobacterium_avium_subsp._paratuberculosis_K-10 10
Mycobacterium_canettii_CIPT_140070017 0
Mycobacterium_canettii_CIPT_140060008 1
Mycobacterium_canettii_CIPT_140070008 1
Mycobacterium_canettii_CIPT_140070010 1
Mycobacterium_tuberculosis_EAI5/NITR206 1
Mycobacterium_tuberculosis_EAI5 0
Mycobacterium_tuberculosis_CAS/NITR204 1
Mycobacterium_tuberculosis_str._Beijing/NITR203 1
Mycobacterium_tuberculosis_UT205 1
Mycobacterium_tuberculosis_RGTB423 0
Mycobacterium_tuberculosis_RGTB327 1
Mycobacterium_tuberculosis_CTRI-2 1
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 0
Mycobacterium_tuberculosis_KZN_605 1
Mycobacterium_tuberculosis_KZN_4207 1
Mycobacterium_tuberculosis_CCDC5180 0
Mycobacterium_tuberculosis_CCDC5079 1
Mycobacterium_tuberculosis_CCDC5079 1
Mycobacterium_tuberculosis_H37Ra 1
Mycobacterium_tuberculosis_str._Haarlem/NITR202 1
Mycobacterium_tuberculosis_str._Haarlem 1
Mycobacterium_tuberculosis_F11 0
Mycobacterium_tuberculosis_H37Rv 1
Mycobacterium_tuberculosis_CDC1551 1
Mycobacterium_bovis_AF2122/97 1
Mycobacterium_bovis_BCG_str._Korea_1168P 0
Mycobacterium_bovis_BCG_str._Mexico 1
Mycobacterium_bovis_BCG_str._Tokyo_172 1
Mycobacterium_gilvum_Spyr1 1
Mycobacterium_smegmatis_str._MC2_155 8
Corynebacterium_urealyticum_DSM_7111 0
Corynebacterium_callunae_DSM_20147 0
Corynebacterium_glutamicum_MB001 0
Corynebacterium_glutamicum_SCgG1 0
Corynebacterium_glutamicum_ATCC_13032 0
Corynebacterium_glutamicum_ATCC_13032 0
Corynebacterium_glutamicum_ATCC_13032 0
Corynebacterium_diphtheriae_BH8 1
Corynebacterium_diphtheriae_INCA_402 0
Corynebacterium_diphtheriae_CDCE_8392 0
Leifsonia_xyli_subsp._cynodontis_DSM_46306 13
Clavibacter_michiganensis_subsp._sepedonicus 93
Bifidobacterium_longum_DJO10A 0
Bifidobacterium_longum_subsp._infantis_157F 0
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 0
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 0
Bifidobacterium_longum_subsp._longum_KACC_91563 0
Bifidobacterium_longum_subsp._longum_BBMN68 0
Bifidobacterium_longum_subsp._longum_F8 1
Bifidobacterium_longum_subsp._longum_JCM_1217 1
Bifidobacterium_thermophilum_RBL67 0
Bifidobacterium_animalis_subsp._lactis_ATCC_27673 0
Bifidobacterium_breve_UCC2003 0
Bifidobacterium_bifidum_PRL2010 0
Bifidobacterium_bifidum_BGN4 0
Thermus_oshimai_JL-2 0
Faecalibacterium_prausnitzii_L2-6 1
Sulfobacillus_acidophilus_TPY 2
Desulfotomaculum_gibsoniae_DSM_7213 0
Thermoanaerobacterium_thermosaccharolyticum_M0795 1
Thermacetogenium_phaeum_DSM_12270 0
Thermoanaerobacter_sp._X513 0
Enterococcus_faecium_DO 1
Lactobacillus_casei_W56 1
Lactobacillus_casei_LC2W 1
Lactobacillus_casei_BD-II 1
Lactobacillus_casei_BL23 1
Lactobacillus_rhamnosus_LOCK900 0
Lactobacillus_rhamnosus_GG 0
Lactobacillus_rhamnosus_GG 0
Lactobacillus_johnsonii_N6.2 8
Lactobacillus_johnsonii_DPC_6026 1
Lactobacillus_johnsonii_NCC_533 7
Lactobacillus_fermentum_F-6 2
Lactobacillus_fermentum_CECT_5716 2
Lactobacillus_amylovorus_GRL_1112 1
Lactobacillus_plantarum_16 1
Lactobacillus_plantarum_ZJ316 1
Lactobacillus_plantarum_subsp._plantarum_ST-III 1
Lactobacillus_helveticus_H10 5
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_11842 2
Lactobacillus_delbrueckii_subsp._bulgaricus_2038 2
Lactobacillus_brevis_KB290 4
Lactococcus_lactis_subsp._lactis_IO-1 1
Streptococcus_intermedius_C270 1
Streptococcus_anginosus_C238 14
Streptococcus_anginosus_C1051 1
Streptococcus_lutetiensis_033 5
Streptococcus_equi_subsp._zooepidemicus 0
Streptococcus_dysgalactiae_subsp._equisimilis_AC-2713 8
Streptococcus_dysgalactiae_subsp._equisimilis_RE378 1
Streptococcus_parasanguinis_FW213 1
Streptococcus_pyogenes_MGAS8232 2
Streptococcus_pyogenes_M1_GAS 1
Streptococcus_pneumoniae_INV200 1
Streptococcus_pneumoniae_AP200 0
Streptococcus_pneumoniae_CGSP14 1
Streptococcus_pneumoniae_670-6B 1
Streptococcus_agalactiae_ILRI005 1
Streptococcus_thermophilus_MN-ZLW-002 0
Streptococcus_thermophilus_JIM_8232 1
Streptococcus_thermophilus_ND03 0
Streptococcus_thermophilus_CNRZ1066 0
Streptococcus_suis_A7 1
Streptococcus_salivarius_CCHSS3 14
Streptococcus_salivarius_JIM8777 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 0
Thermobacillus_composti_KWC4 13
Paenibacillus_polymyxa_E681 3
Geobacillus_sp._Y4.1MC1 1
Geobacillus_sp._Y412MC52 1
Geobacillus_sp._Y412MC61 1
Bacillus_subtilis_subsp._natto_BEST195 0
Bacillus_cereus_biovar_anthracis_str._CI 1
Bacillus_cereus_AH820 0
Bacillus_cereus_E33L 0
Bacillus_anthracis_str._H9401 2
Bacillus_coagulans_36D1 0
Staphylococcus_aureus_subsp._aureus_MSHR1132 1
Staphylococcus_pseudintermedius_ED99 0
Staphylococcus_aureus_Bmb9393 0
Staphylococcus_aureus_M1 1
Staphylococcus_aureus_08BA02176 4
Staphylococcus_aureus_subsp._aureus_Z172 0
Staphylococcus_aureus_subsp._aureus_11819-97 0
Staphylococcus_aureus_subsp._aureus_T0131 0
Staphylococcus_aureus_subsp._aureus_TW20 1
Staphylococcus_aureus_subsp._aureus_55/2053 6
Staphylococcus_aureus_subsp._aureus_TCH60 6
Staphylococcus_aureus_subsp._aureus_str._JKD6008 0
Staphylococcus_aureus_subsp._aureus_71193 3
Staphylococcus_aureus_subsp._aureus_S0385 4
Staphylococcus_aureus_subsp._aureus_USA300_TCH1516 1
Staphylococcus_aureus_subsp._aureus_MRSA252 6
Bacteroides_fragilis_NCTC_9343 0
Singulisphaera_acidiphila_DSM_18658 11
Spirochaeta_thermophila_DSM_6578 6
Leptospirillum_ferriphilum_ML-04 1
Desulfobacula_toluolica_Tol2 3
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 4
Desulfovibrio_vulgaris_RCH1 2
Desulfovibrio_vulgaris_str._Hildenborough 2
Sorangium_cellulosum_So0157-2 2
Anaeromyxobacter_sp._K 2
Neisseria_meningitidis_WUE_2594 11
Neisseria_meningitidis_G2136 8
Neisseria_meningitidis_M04-240196 12
Neisseria_meningitidis_M01-240149 10
Neisseria_meningitidis_NZ-05/33 10
Neisseria_meningitidis_M01-240355 11
Neisseria_meningitidis_8013 9
Neisseria_meningitidis_053442 6
Neisseria_meningitidis_Z2491 6
Neisseria_meningitidis_H44/76 15
Neisseria_meningitidis_alpha710 10
Neisseria_meningitidis_MC58 14
Burkholderia_phenoliruptrix_BR3459a 3
Ralstonia_solanacearum_FQY_4 0
Ralstonia_solanacearum_Po82 11
Ralstonia_solanacearum_PSI07 0
Ralstonia_solanacearum_CMR15 1
Ralstonia_solanacearum_GMI1000 8
Burkholderia_sp._YI23 0
Burkholderia_sp._KJ006 4
Burkholderia_thailandensis_MSMB121 1
Burkholderia_pseudomallei_1710b 1
Burkholderia_lata 1
Burkholderia_ambifaria_MC40-6 0
Burkholderia_cenocepacia_MC0-3 3
Burkholderia_cenocepacia_AU_1054 3
Burkholderia_cenocepacia_J2315 5
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 5
Bordetella_pertussis_CS 196
Bordetella_parapertussis_18323 232
Nitrosomonas_sp._AL212 7
Caulobacter_crescentus_CB15 3
Phaeobacter_gallaeciensis_DSM_26640 0
Leisingera_methylohalidivorans_DSM_14336 0
Octadecabacter_antarcticus_307 10
Octadecabacter_arcticus_238 3
Rhodobacter_sphaeroides_ATCC_17025 6
Rhodobacter_sphaeroides_2.4.1 1
Paracoccus_aminophilus_JCM_7686 1
Gluconacetobacter_diazotrophicus_PAl_5 11
Gluconobacter_oxydans_H24 4
Acetobacter_pasteurianus_IFO_3283-12 2
Acetobacter_pasteurianus_IFO_3283-01-42C 2
Acetobacter_pasteurianus_IFO_3283-32 2
Acetobacter_pasteurianus_IFO_3283-26 2
Acetobacter_pasteurianus_IFO_3283-22 2
Acetobacter_pasteurianus_IFO_3283-07 2
Acetobacter_pasteurianus_IFO_3283-03 2
Wolbachia_endosymbiont_of_Drosophila_simulans_wHa 2
Methylobacterium_extorquens_DM4 5
Methylobacterium_extorquens_PA1 0
Brucella_suis_1330 1
Brucella_suis_1330 1
Sinorhizobium_fredii_USDA_257 4
Sinorhizobium_fredii_HH103 2
Sinorhizobium_meliloti_2011 4
Sinorhizobium_meliloti_GR4 3
Sinorhizobium_meliloti_Rm41 4
Sinorhizobium_meliloti_SM11 6
Sinorhizobium_meliloti_BL225C 4
Sinorhizobium_meliloti_1021 7
Rhizobium_etli_CFN_42 1
Rhizobium_tropici_CIAT_899 2
Rhizobium_leguminosarum_bv._trifolii_WSM2304 0
Rhizobium_leguminosarum_bv._trifolii_WSM1325 4
Mesorhizobium_australicum_WSM2073 1
Rhodopseudomonas_palustris_DX-1 5
Rhodopseudomonas_palustris_TIE-1 4
Rhodopseudomonas_palustris_BisB5 1
Rhodopseudomonas_palustris_CGA009 1
Bradyrhizobium_sp._BTAi1 7
Bradyrhizobium_japonicum_USDA_6 15
Bartonella_vinsonii_subsp._berkhoffii_str._Winnie 0
Mannheimia_succiniciproducens_MBEL55E 0
Bibersteinia_trehalosi_USDA-ARS-USMARC-192 0
Aggregatibacter_actinomycetemcomitans_D11S-1 0
Haemophilus_somnus_2336 1
Mannheimia_haemolytica_USMARC_2286 19
Mannheimia_haemolytica_M42548 20
Mannheimia_haemolytica_D174 6
Mannheimia_haemolytica_D171 21
Mannheimia_haemolytica_D153 16
Mannheimia_haemolytica_USDA-ARS-USMARC-183 22
Mannheimia_haemolytica_USDA-ARS-USMARC-185 14
Haemophilus_influenzae_F3031 0
Haemophilus_influenzae_10810 1
Haemophilus_influenzae_Rd_KW20 0
Actinobacillus_suis_H91-0380 1
Actinobacillus_pleuropneumoniae_serovar_3_str._JL03 2
Actinobacillus_pleuropneumoniae_serovar_7_str._AP76 9
Vibrio_sp._EJY3 1
Vibrio_nigripulchritudo_VibrioScope 5
Vibrio_vulnificus_CMCP6 1
Vibrio_vulnificus_YJ016 5
Vibrio_cholerae_LMA3984-4 1
Vibrio_cholerae_M66-2 1
Vibrio_cholerae_O395 3
Vibrio_cholerae_IEC224 1
Vibrio_cholerae_O1_str._2010EL-1786 1
Vibrio_cholerae_MJ-1236 1
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 1
Idiomarina_loihiensis_GSL_199 1
Shewanella_baltica_BA175 7
Shewanella_baltica_OS678 6
Shewanella_baltica_OS117 26
Shewanella_baltica_OS223 5
Shewanella_baltica_OS155 5
Shewanella_sp._MR-7 1
Shewanella_putrefaciens_200 11
Glaciecola_psychrophila_170 1
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 0
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 0
Alteromonas_macleodii_ATCC_27126 0
Stenotrophomonas_maltophilia_JV3 4
Stenotrophomonas_maltophilia_R551-3 5
Xanthomonas_citri_subsp._citri_Aw12879 14
Xanthomonas_oryzae_pv._oryzicola_BLS256 2
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 3
Xanthomonas_oryzae_pv._oryzae_KACC_10331 0
Thioflavicoccus_mobilis_8321 12
Legionella_pneumophila_str._Paris 3
Legionella_pneumophila_str._Lens 6
Legionella_pneumophila_subsp._pneumophila_LPE509 2
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 4
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 3
Legionella_pneumophila_subsp._pneumophila 2
Legionella_pneumophila_subsp._pneumophila 4
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 1
Legionella_pneumophila_2300/99_Alcoy 3
Yersinia_pseudotuberculosis_PB1/+ 6
Yersinia_pseudotuberculosis_IP_32953 5
Yersinia_pestis_biovar_Microtus_str._91001 35
Yersinia_pestis_A1122 47
Yersinia_pestis_Z176003 30
Yersinia_pestis_D182038 34
Yersinia_pestis_D106004 31
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 31
Yersinia_pestis_Nepal516 32
Yersinia_pestis_Antiqua 74
Yersinia_pestis_Angola 35
Yersinia_pestis_CO92 47
Yersinia_pestis_KIM10+ 36
Serratia_sp._AS13 0
Serratia_marcescens_FGI94 5
Dickeya_dadantii_Ech586 2
Erwinia_pyrifoliae_DSM_12163 1
Shigella_sonnei_53G 17
Shigella_flexneri_2002017 2
Shigella_flexneri_2a_str._2457T 0
Shigella_flexneri_2a_str._301 1
Shigella_dysenteriae_1617 1
Shigella_boydii_Sb227 1
Salmonella_bongori_N268-08 1
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 3
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 1
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 1
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 1
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 0
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 0
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 1
Klebsiella_pneumoniae_JM45 2
Klebsiella_pneumoniae_CG43 2
Klebsiella_pneumoniae_KCTC_2242 3
Klebsiella_pneumoniae_342 0
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 1
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 19
Escherichia_coli_E24377A 2
Escherichia_coli_E._coli_PMV-1 1
Escherichia_coli_JJ1886 1
Escherichia_coli_LY180 0
Escherichia_coli_O7:K1_str._CE10 2
Escherichia_coli_O104:H4_str._2009EL-2050 1
Escherichia_coli_O104:H4_str._2009EL-2071 1
Escherichia_coli_O104:H4_str._2011C-3493 2
Escherichia_coli_NA114 1
Escherichia_coli_P12b 1
Escherichia_coli_str._'clone_D_i2' 2
Escherichia_coli_str._'clone_D_i14' 2
Escherichia_coli_UM146 2
Escherichia_coli_042 1
Escherichia_coli_IHE3034 1
Escherichia_coli_UMNK88 1
Escherichia_coli_O83:H1_str._NRG_857C 1
Escherichia_coli_ABU_83972 2
Escherichia_coli_KO11FL 0
Escherichia_coli_KO11FL 0
Escherichia_coli_IAI39 2
Escherichia_coli_UMN026 1
Escherichia_coli_55989 3
Escherichia_coli_S88 1
Escherichia_coli_W 0
Escherichia_coli_W 0
Escherichia_coli_DH1 1
Escherichia_coli_DH1 1
Escherichia_coli_ATCC_8739 0
Escherichia_coli_BL21(DE3) 5
Escherichia_coli_BL21(DE3) 5
Escherichia_coli_SE15 3
Escherichia_coli_SE11 0
Escherichia_coli_APEC_O1 1
Escherichia_coli_UTI89 2
Escherichia_coli_536 10
Escherichia_coli_ETEC_H10407 2
Escherichia_coli_O55:H7_str._RM12579 1
Escherichia_coli_O55:H7_str._CB9615 1
Escherichia_coli_CFT073 2
Escherichia_coli_O111:H-_str._11128 0
Escherichia_coli_O127:H6_str._E2348/69 5
Escherichia_coli_BW2952 0
Escherichia_coli_str._K-12_substr._MG1655 1
Escherichia_coli_str._K-12_substr._W3110 1
Escherichia_coli_str._K-12_substr._DH10B 1
Enterobacter_cloacae_SCF1 1
Enterobacter_cloacae_subsp._cloacae_NCTC_9394 0
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 1
Azotobacter_vinelandii_CA6 11
Azotobacter_vinelandii_CA 12
Pseudomonas_syringae_pv._phaseolicola_1448A 1
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 2
Pseudomonas_putida_KT2440 1
Pseudomonas_fluorescens_F113 1
Pseudomonas_aeruginosa_PA7 0
Pseudomonas_aeruginosa_PAO1 0
Acinetobacter_radioresistens__SH164 1
Acinetobacter_junii__SH205 0
Acinetobacter_johnsonii__SH046 1
Acinetobacter_lwoffii__SH145 3
Francisella_tularensis_subsp._holarctica_FTNF002-00 50
Francisella_tularensis_subsp._holarctica_OSU18 37
Francisella_tularensis_subsp._holarctica_LVS 50
Sulfolobus_islandicus_REY15A 1
Sulfolobus_islandicus_M.14.25 2
Sulfolobus_solfataricus_98/2 4
Methanolobus_psychrophilus_R15 6
Methanoregula_formicica_Methanoregula_formicicum_SMSP 2
Pyrococcus_furiosus_DSM_3638 10
Ferroplasma_acidarmanus_fer1 8
Haloquadratum_walsbyi_C23 1
Natronomonas_moolapensis_8.8.11 10

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Others
Genome     Number
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 1
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 42
NCBI_plasmid_sequences_(Plasmids) 356
TargetDB__(Targets) 31
Protein_Data_Bank_(all_PDB_sequenc) 0
UniProt__viral_sequences_(Viral) 1
NCBI_viral_sequences_(Viral) 2
STRING_v9.0.5_(STRING) 2097
Uniprot_2018_03_genome 36480
NCBI_2017_08_genome 56349

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