SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 47576 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47576 - Calponin-homology domain, CH-domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   67
Pan_troglodytes_76_2.1.4   (Chimpanzee)   5
Gorilla_gorilla_76_3.1   (Western gorilla)   3
Pongo_abelii_76_2   (Sumatran orangutan)   4
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   5
Papio_anubis_76   (Olive baboon)   3
Macaca_mulatta_76_1   (Rhesus monkey)   13
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   12
Otolemur_garnettii_76_3   (Small-eared galago)   3
Microcebus_murinus_76_1   (Gray mouse lemur)   3
Rattus_norvegicus_76_5.0   (Norway rat)   3
Mus_musculus_76_38   (House mouse)   23
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   3
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   3
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   10
Cavia_porcellus_76_3   (Domestic guinea pig)   3
Oryctolagus_cuniculus_76_2   (Rabbit)   3
Ochotona_princeps_76   (American pika)   2
Tupaia_belangeri_76   (Northern tree shrew)   3
Sus_scrofa_76_10.2   (Pig)   9
Bos_taurus_76_3.1   (Cattle)   2
Ovis_aries_76_3.1   (Sheep)   2
Vicugna_pacos_76_1   (Alpaca)   1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   2
Mustela_putorius_furo_76_1.0   (Domestic ferret)   4
Ailuropoda_melanoleuca_76_1   (Giant panda)   3
Canis_familiaris_76_3.1   (Dog)   3
Felis_catus_76_6.2   (Domestic cat)   8
Equus_caballus_76_2   (Horse)   2
Myotis_lucifugus_76_2.0   (Little brown bat)   3
Pteropus_vampyrus_76_1   (Large flying fox)   3
Sorex_araneus_76_1   (European shrew)   1
Erinaceus_europaeus_76   (Western European hedgehog)   1
Procavia_capensis_76_1   (Cape rock hyrax)   2
Loxodonta_africana_76_3   (African savanna elephant)   2
Echinops_telfairi_76   (Small Madagascar hedgehog)   3
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   7
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   1
Macropus_eugenii_76_1.0   (Tammar wallaby)   2
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   5
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   4
Ornithorhynchus_anatinus_76_5   (Platypus)   18
Saccoglossus_kowalevskii_v3.0 7
Petromyzon_marinus_76_7.0   (Sea lamprey)   7
Meleagris_gallopavo_76_2   (Turkey)   4
Gallus_gallus_76_4   (Chicken)   5
Anas_platyrhynchos_76_1.0   (Mallard)   5
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   4
Ficedula_albicollis_76_1.0   (Collared flycatcher)   2
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   4
Anolis_carolinensis_76_2.0   (Green anole)   2
Xenopus_laevis_   (African clawed frog)   6
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   5
Latimeria_chalumnae_76_1   (Coelacanth)   2
Lepisosteus_oculatus_76   (Spotted gar)   4
Gadus_morhua_76_1   (Atlantic cod)   6
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   6
Takifugu_rubripes_76_4   (Torafugu)   6
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   9
Oryzias_latipes_76_1   (Japanese medaka)   8
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   2
Poecilia_formosa_76   (Amazon molly)   3
Oreochromis_niloticus_76_1.0   (Nile tilapia)   0
Astyanax_mexicanus_76   (Mexican tetra)   10
Danio_rerio_76_9   (Zebrafish)   19
Oikopleura_dioica 6
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   8
Ciona_intestinalis_76   (Vase tunicate)   6
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   13
Adineta_vaga 32
Octopus_bimaculoides_280 9
Crassostrea_gigas_22   (Pacific oyster)   12
Lottia_gigantea_   (Owl limpet)   20
Helobdella_robusta_ 19
Capitella_sp._I_ 15
Danaus_plexippus_OGS1.0   (Monarch butterfly)   9
Heliconius_melpomene_   (Postman butterfly)   8
Bombyx_mori_   (Domestic silkworm)   13
Nasonia_vitripennis_   (Jewel wasp)   6
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   23
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   10
Linepithema_humile_v1.1   (Argentine ant)   14
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   15
Solenopsis_invicta_v.2.2.3   (Red fire ant)   12
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   8
Atta_cephalotes_v1.1 13
Camponotus_floridanus_v3.3   (Florida carpenter ant)   6
Lucilia_cuprina   (Australian sheep blowfly)   4
Drosophila_grimshawi_1.3 8
Drosophila_willistoni_1.3 5
Drosophila_pseudoobscura_2.13 8
Drosophila_persimilis_1.3 7
Drosophila_suzukii 5
Drosophila_yakuba_1.3 6
Drosophila_simulans_1.3 4
Drosophila_sechellia_1.3 7
Drosophila_melanogaster_76_5   (Fruit fly)   5
Drosophila_erecta_1.3 5
Drosophila_ananassae_1.3 3
Drosophila_virilis_1.2 6
Drosophila_mojavensis_1.3 6
Megaselia_scalaris_22 12
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   8
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   9
Anopheles_darlingi_22   (American malaria mosquito)   6
Anopheles_gambiae_49_3j   (African malaria mosquito)   7
Tribolium_castaneum_3.0   (Red flour beetle)   7
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   7
Acyrthosiphon_pisum_   (Pea aphid)   6
Rhodnius_prolixus_22 6
Daphnia_pulex_   (Common water flea)   7
Strigamia_maritima_22 9
Sarcoptes_scabiei 8
Tetranychus_urticae_   (Two-spotted spider mite)   6
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   11
Pristionchus_pacificus_ 7
Meloidogyne_incognita_   (Southern root-knot nematode)   4
Meloidogyne_hapla_ 6
Onchocerca_volvulus_22 8
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   9
Caenorhabditis_japonica_ 9
Caenorhabditis_brenneri_ 8
Caenorhabditis_remanei_ 5
Caenorhabditis_elegans_76_235   (Roundworm)   4
Caenorhabditis_briggsae_2 4
Trichinella_spiralis_22 6
Hymenolepis_microstoma_ 4
Echinococcus_multilocularis_ 3
Echinococcus_granulosus_ 4
Taenia_solium_   (Pork tapeworm)   7
Schistosoma_mansoni_ 7
Mnemiopsis_leidyi   (Sea walnut)   12
Thelohanellus_kitauei 1
Acropora_digitifera_v1.0 8
Nematostella_vectensis_1.0   (Starlet sea anemone)   24
Hydra_vulgaris 14
Amphimedon_queenslandica 9
Trichoplax_adhaerens_ 7
Proterospongia_sp._ATCC_50818_ 3
Monosiga_brevicollis_ 2
Sphaeroforma_arctica_JP610_ 6
Capsaspora_owczarzaki_ATCC_30864_ 1
Conidiobolus_coronatus_NRRL28638_v1.0 2
Mortierella_verticillata_NRRL_6337_ 1
Phycomyces_blakesleeanus_ 1
Rhizopus_oryzae_RA_99-880_ 4
Mucor_circinelloides_ 1
Rhizomucor_miehei_CAU432_ 1
Malassezia_globosa_CBS_7966_ 0
Sporisorium_reilianum_22 0
Ustilago_maydis_ 0
Mixia_osmundae_IAM_14324_v1.0 0
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 0
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 1
Melampsora_laricis-populina_ 0
Rhodotorula_graminis_WP1_v1.0 0
Sporobolomyces_roseus_IAM_13481_ 0
Microbotryum_violaceum_22 0
Wallemia_sebi_v1.0 0
Sphaerobolus_stellatus_v1.0 0
Piloderma_croceum_F_1598_v1.0 0
Serpula_lacrymans_var._lacrymans_S7.9_ 0
Coniophora_puteana 0
Hydnomerulius_pinastri_v2.0 0
Paxillus_rubicundulus_Ve08.2h10_v1.0 0
Pisolithus_microcarpus_441_v1.0 0
Pisolithus_tinctorius_Marx_270_v1.0 0
Scleroderma_citrinum_Foug_A_v1.0 0
Coprinopsis_cinerea_okayama7_130_v3 0
Pleurotus_ostreatus_   (Oyster mushroom)   0
Amanita_thiersii_Skay4041_v1.0 0
Amanita_muscaria_Koide_v1.0   (Fly agaric)   0
Galerina_marginata_v1.0 1
Hebeloma_cylindrosporum_h7_v2.0 0
Laccaria_bicolor_S238N-H82_ 0
Agaricus_bisporus_var._bisporus_ 0
Schizophyllum_commune_ 0
Stereum_hirsutum_FP-91666_SS1__v1.0 0
Heterobasidion_annosum_ 0
Gloeophyllum_trabeumv1.0 0
Punctularia_strigosozonata_v1.0 0
Sebacina_vermifera_MAFF_305830_v1.0 0
Fomitiporia_mediterranea_v1.0 0
Tulasnella_calospora_AL13/4D_v1.0 0
Postia_placenta_ 0
Wolfiporia_cocos_MD-104_SS10__v1.0 0
Fomitopsis_pinicolav1.0 0
Fomitopsis_pinicola_FP-58527_SS1_v3.0 0
Phanerochaete_chrysosporium_RP-78_2.1 0
Dichomitus_squalens 0
Trametes_versicolor_v1.0 0
Tremella_mesenterica_   (Witches' butter)   0
Daldinia_eschscholzii_EC12_v1.0 0
Apiospora_montagnei_NRRL_25634_v1.0 0
Magnaporthe_poae_ATCC_64411_22 0
Magnaporthe_grisea_70-15_ 0
Podospora_anserina_ 0
Sporotrichum_thermophile_ATCC_42464_ 0
Thielavia_terrestris_NRRL_8126_ 0
Chaetomium_globosum_CBS_148.51_ 0
Neurospora_tetrasperma_ 0
Neurospora_discreta_FGSC_8579_ 0
Neurospora_crassa_OR74A_ 0
Cryphonectria_parasitica_   (Chestnut blight fungus)   1
Verticillium_albo-atrum_VaMs.102_ 0
Verticillium_dahliae_VdLs.17_ 0
Acremonium_alcalophilumv_1.0 0
Glomerella_graminicola_22 0
Fusarium_graminearum_ 0
Nectria_haematococca_mpVI_ 0
Fusarium_oxysporum_f._sp._lycopersici_4286_ 0
Fusarium_verticillioides_7600_ 0
Trichoderma_asperellum_CBS_433.97_v1.0 0
Trichoderma_atroviride_ 0
Trichoderma_citrinoviride_v1.0 0
Trichoderma_reesei_1.2 0
Trichoderma_virens_Gv29-8_ 0
Trichoderma_longibrachiatum_ATCC_18648_v1.0 0
Trichoderma_harzianum_CBS_226.95_v1.0 0
Amorphotheca_resinae_v1.0   (Creosote fungus)   0
Botrytis_cinerea_B05.10_ 0
Sclerotinia_sclerotiorum_ 0
Blumeria_graminis_22 1
Didymella_exigua_CBS_183.55_v1.0 0
Leptosphaeria_maculans_22 0
Setosphaeria_turcica_v1.0 0
Cochliobolus_miyabeanus_ATCC_44560_v1.0 0
Cochliobolus_victoriae_FI3_v1.0 0
Cochliobolus_carbonum_26-R-13_v1.0 0
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   0
Alternaria_brassicicola_ 0
Cochliobolus_lunatus_m118_v2.0 0
Pyrenophora_teres_f._teres_22 0
Pyrenophora_tritici-repentis_ 0
Stagonospora_nodorum_ 0
Mycosphaerella_graminicola_IPO323_ 1
Zasmidium_cellare_ATCC_36951_v1.0 0
Dothistroma_septosporum 0
Septoria_musiva_v1.0 0
Mycosphaerella_fijiensis_CIRAD86_ 0
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 0
Paracoccidioides_brasiliensis_Pb18_ 0
Coccidioides_posadasii_RMSCC_3488_ 0
Coccidioides_immitis_RS_ 0
Ajellomyces_dermatitidis_SLH14081_ 0
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 0
Microsporum_canis_CBS_113480_ 0
Trichophyton_equinum_CBS_127.97_ 1
Trichophyton_verrucosum_HKI_0517_ 0
Arthroderma_benhamiae_CBS_112371_ 0
Trichophyton_tonsurans_CBS_112818_ 0
Trichophyton_rubrum_CBS_118892_ 0
Uncinocarpus_reesii_1704_ 0
Aspergillus_zonatus_v1.0 0
Penicillium_chrysogenum_Wisconsin_54-1255_ 0
Penicillium_chrysogenum_v1.0 0
Aspergillus_acidus_v1.0 0
Aspergillus_fumigatus_Af293 0
Aspergillus_brasiliensis_v1.0 0
Aspergillus_nidulans_FGSC_A4_ 0
Aspergillus_sydowii_v1.0 0
Aspergillus_versicolor_v1.0 0
Aspergillus_glaucus 0
Aspergillus_carbonarius_ITEM_5010_ 0
Neosartorya_fischeri_NRRL_181_ 0
Aspergillus_terreus_NIH2624_ 0
Aspergillus_tubingensis_v1.0 0
Aspergillus_wentii_v1.0 0
Aspergillus_oryzae_RIB40_ 0
Aspergillus_niger_22 0
Aspergillus_niger_ATCC_1015_ 0
Aspergillus_flavus_NRRL3357_ 0
Aspergillus_clavatus_NRRL_1_ 0
Penicillium_marneffei_ATCC_18224_ 0
Tuber_melanosporum_Mel28_22 0
Tuber_melanosporum_Vittad_   (Perigord truffle)   0
Hansenula_polymorpha_v2.0 1
Dekkera_bruxellensis_CBS_2499_v2.0 1
Pichia_membranifaciensv1.0 1
Candida_tanzawaensis_NRRL_Y-17324__v1.0 1
Candida_dubliniensis_CD36_ 1
Candida_tropicalis_MYA-3404_ 1
Candida_parapsilosis_ 1
Candida_albicans_SC5314 0
Lodderomyces_elongisporus_NRRL_YB-4239_ 1
Babjeviella_inositovora_NRRL_Y-12698_v1.0 0
Pichia_stipitis_CBS_6054_ 1
Candida_guilliermondii_ATCC_6260_ 0
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 1
Debaromyces_hansenii 1
Wickerhamomyces_anomalus 1
Pichia_pastoris_GS115_ 1
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 0
Yarrowia_lipolytica_CLIB122 0
Candida_lusitaniae_ATCC_42720_ 1
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1
Vanderwaltozyma_polyspora_DSM_70294_ 1
Candida_glabrata_CBS138 1
Kluyveromyces_thermotolerans_CBS_6340 1
Lachancea_kluyveri_ 1
Kluyveromyces_waltii 1
Ashbya_gossypii_ATCC_10895_ 1
Zygosaccharomyces_rouxii_ 1
Saccharomyces_mikatae_MIT 1
Saccharomyces_paradoxus_MIT 1
Saccharomyces_cerevisiae_76   (Baker's yeast)   1
Saccharomyces_bayanus_MIT 1
Kluyveromyces_lactis 1
Schizosaccharomyces_cryophilus_OY26_22 1
Schizosaccharomyces_octosporus_yFS286_ 1
Schizosaccharomyces_japonicus_yFS275_ 0
Schizosaccharomyces_pombe   (Fission yeast)   1
Catenaria_anguillulae_PL171_v1.0 1
Allomyces_macrogynus_ATCC_38327_ 4
Spizellomyces_punctatus_DAOM_BR117_ 2
Dictyostelium_discoideum 1
Dictyostelium_purpureum_ 3
Entamoeba_dispar_1.2 2
Entamoeba_invadens_1.2 0
Entamoeba_histolytica_1 1
Selaginella_moellendorffii_ 7
Pinus_taeda   (Loblolly pine)   1
Picea_abies   (Norway spruce)   0
Eucalyptus_grandis_v201   (Rose gum)   0
Theobroma_cacao_B97-61/B2_v1   (Cacao)   2
Gossypium_raimondii_v221 0
Citrus_clementina_v165 1
Citrus_sinensis_v154   (Sweet orange)   3
Thellungiella_halophila_v173 0
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   1
Capsella_rubella_v183 0
Arabidopsis_lyrata_   (Lyrate rockcress)   0
Arabidopsis_thaliana_10   (Thale cress)   0
Carica_papaya_   (Papaya)   1
Medicago_truncatula_   (Barrel medic)   1
Phaseolus_vulgaris_v186   (French bean)   0
Glycine_max_v109   (Soybean)   2
Cucumis_sativus_v122   (Cucumber)   0
Fragaria_vesca_   (Wild strawberry)   0
Malus_domestica_v196   (Apple)   1
Prunus_persica_v139   (Peach)   1
Linum_usitatissimum_v200   (Flax)   0
Manihot_esculenta_v147   (Cassava)   0
Populus_trichocarpa_v156   (Black cottonwood)   0
Vitis_vinifera_   (Wine grape)   2
Mimulus_guttatus_v140   (Spotted monkey flower)   1
Solanum_lycopersicum_v.2.3   (Tomato)   0
Solanum_tuberosum_   (Potato)   1
Actinidia_chinensis_Hongyang_ 2
Aquilegia_coerulea_v195 2
Triticum_urartu_22 0
Triticum_aestivum_22   (Bread wheat)   9
Aegilops_tauschii_22 3
Brachypodium_distachyon_   (Stiff brome)   0
Oryza_barthii_22   (African wild rice)   0
Oryza_meridionalis_22 0
Oryza_glumaepatula_22 0
Oryza_glaberrima   (African rice)   1
Oryza_punctata_22 0
Oryza_nivara_22 0
Oryza_brachyantha_22   (Malo sina)   1
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   0
Oryza_sativa_v193   (Rice)   0
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   3
Panicum_virgatum_v202   (Switchgrass)   3
Setaria_italica_v164   (Foxtail millet)   0
Zea_mays_subsp._mays_   (Maize)   4
Zea_mays_v181   (Maize)   4
Sorghum_bicolor_   (Sorghum)   1
Musa_balbisiana   (Balbis banana)   0
Musa_acuminata_22   (Wild Malaysian banana)   1
Amborella_trichopoda_22 1
Physcomitrella_patens 1
Coccomyxa_subellipsoidea_sp._C-169_v2 1
Asterochloris_sp._Cgr/DA1pho_v1.0 1
Chlorella_variabilis_sp._NC64A_ 1
Chlorella_vulgaris_ 1
Volvox_carteri_f._nagariensis_ 1
Volvox_carteri_v199 1
Chlamydomonas_reinhardtii_4.0 1
Ostreococcus_sp._RCC809_ 1
Ostreococcus_lucimarinus_CCE9901_ 0
Ostreococcus_tauri_ 0
Bathycoccus_prasinos_ 0
Micromonas_sp._RCC299_ 0
Micromonas_pusilla_CCMP1545_v3.0 2
Cyanidioschyzon_merolae_strain_10D_22 0
Cyanidioschyzon_merolae 0
Porphyridium_purpureum_02_2012 0
Thecamonas_trahens_ATCC_50062_ 2
Bigelowiella_natans_CCMP2755_22 5
Giardia_lamblia_2.3 1
Cyanophora_paradoxa_ 6
Leishmania_mexicana_2.4 0
Leishmania_major_strain_Friedlin_ 0
Leishmania_infantum_JPCM5_2.4 0
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 0
Trypanosoma_vivax_ 1
Trypanosoma_cruzi_strain_CL_Brener 0
Trypanosoma_congolense_2.4 0
Trypanosoma_brucei_gambiense_v4.1 0
Trypanosoma_brucei_TREU927_v4.1 0
Ectocarpus_siliculosus 0
Aureococcus_anophagefferens_ 7
Albugo_laibachii_22 1
Pythium_iwayamai_DAOM_BR242034_22 2
Pythium_arrhenomanes_ATCC_12531_22 1
Pythium_ultimum_v1.7-2 4
Pythium_aphanidermatum_DAOM_BR444_22 2
Pythium_irregulare_DAOM_BR486_22 1
Pythium_vexans_DAOM_BR484_22 2
Phytophthora_ramorum_1.1   (Sudden oak death agent)   2
Phytophthora_sojae_1.1 1
Phytophthora_infestans_T30-4_ 2
Phytophthora_capsici_ 4
Hyaloperonospora_arabidopsidis_22 0
Phaeodactylum_tricornutumCCAP_1055/1 0
Fragilariopsis_cylindrus 0
Thalassiosira_pseudonana_CCMP1335 0
Perkinsus_marinus_ATCC_50983_ 4
Paramecium_tetraurelia_ 17
Tetrahymena_thermophila_SB210_1_ 2
Ichthyophthirius_multifiliis_strain_G5_ 4
Cryptosporidium_hominis 0
Cryptosporidium_muris 0
Cryptosporidium_parvum_Iowa_II 0
Neospora_caninum 0
Toxoplasma_gondii_VEG 0
Toxoplasma_gondii_ME49 0
Toxoplasma_gondii_GT1 0
Babesia_bovis_T2Bo_ 0
Theileria_parva__ 0
Theileria_annulata 0
Plasmodium_falciparum_3D7_ 1
Plasmodium_vivax_SaI-1_7.0 1
Plasmodium_knowlesi_strain_H_ 1
Plasmodium_yoelii_ssp._yoelii_1_ 1
Plasmodium_chabaudi_ 1
Plasmodium_berghei_ANKA_ 1
Symbiodinium_minutum_clade_B1_v1.2 3
Naegleria_gruberi_ 3
Trichomonas_vaginalis_ 6
Guillardia_theta_CCMP2712_v1.0_ 6
Emiliania_huxleyi_CCMP1516_ 11
Candidatus_Phytoplasma_mali 0
Mesoplasma_florum_L1 0
Mycoplasma_agalactiae_PG2 0
Mycoplasma_genitalium_G37 0
Streptomyces_coelicolor_A3(2) 0
Streptomyces_bingchenggensis_BCW-1 0
Streptomyces_avermitilis_MA-4680 0
Rhodococcus_opacus_B4 0
Corynebacterium_resistens_DSM_45100 0
Dehalococcoides_ethenogenes_195 0
Eubacterium_siraeum 0
Desulfitobacterium_hafniense_Y51 0
Desulfitobacterium_dehalogenans_ATCC_51507 0
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 0
Clostridium_acetobutylicum_ATCC_824 0
Caldicellulosiruptor_hydrothermalis_108 0
Halanaerobium_praevalens_DSM_2228 0
Leuconostoc_sp._C2 0
Leuconostoc_kimchii_IMSNU_11154 0
Lactobacillus_crispatus_ST1 0
Lactobacillus_amylovorus_GRL1118 0
Lactobacillus_acidophilus_30SC 0
Kyrpidia_tusciae_DSM_2912 0
Listeria_innocua_Clip11262 0
Geobacillus_thermoglucosidasius_C56-YS93 0
Halobacillus_halophilus_DSM_2266 0
Bacillus_sp._1NLA3E 0
Bacillus_amyloliquefaciens_FZB42 0
Staphylococcus_carnosus_subsp._carnosus_TM300 0
Haliscomenobacter_hydrossis_DSM_1100 0
Cytophaga_hutchinsonii_ATCC_33406 0
Bacteroides_thetaiotaomicron_VPI-5482 0
Pedobacter_saltans_DSM_12145 0
Zunongwangia_profunda_SM-A87 0
Krokinobacter_sp._4H-3-7-5 0
Lacinutrix_sp._5H-3-7-4 0
Robiginitalea_biformata_HTCC2501 0
Croceibacter_atlanticus_HTCC2559 0
Cellulophaga_algicola_DSM_14237 0
Flavobacterium_indicum_GPTSA100-9 0
Flavobacterium_psychrophilum_JIP02/86 0
Flavobacterium_columnare_ATCC_49512 0
Fibrobacter_succinogenes_subsp._succinogenes_S85 0
Borrelia_burgdorferi_B31 0
Treponema_succinifaciens_DSM_2489 0
Treponema_denticola_ATCC_35405 0
Thermodesulfobacterium_sp._OPB45 0
Acidobacterium_capsulatum_ATCC_51196 0
Sebaldella_termitidis_ATCC_33386 0
Arcobacter_nitrofigilis_DSM_7299 0
Campylobacter_hominis_ATCC_BAA-381 0
Campylobacter_lari_RM2100 0
Campylobacter_jejuni_subsp._doylei_269.97 0
Campylobacter_sp._03-427 0
Campylobacter_fetus_subsp._fetus_82-40 0
Sulfurimonas_autotrophica_DSM_16294 0
Helicobacter_bizzozeronii_CIII-1 0
Dechloromonas_aromatica_RCB 0
Burkholderia_xenovorans_LB400 0
Herbaspirillum_seropedicae_SmR1 0
Gallionella_capsiferriformans_ES-2 0
Wolbachia_endosymbiont_of_Culex_quinquefasciatus_Pel 0
Rickettsia_massiliae_MTU5 0
Cellvibrio_japonicus_Ueda107 0
Haemophilus_somnus_129PT 0
Gallibacterium_anatis_UMN179 0
Haemophilus_parainfluenzae_T3T1 0
Shewanella_piezotolerans_WP3 0
Pseudoalteromonas_sp._SM9913 0
Pseudoalteromonas_atlantica_T6c 0
Marinomonas_posidonica_IVIA-Po-181 0
Marinomonas_mediterranea_MMB-1 0
Photorhabdus_asymbiotica 0
Yersinia_pseudotuberculosis_IP_31758 0
Yersinia_pestis_Pestoides_F 0
Yersinia_enterocolitica_subsp._enterocolitica_8081 0
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 0
Pseudomonas_fluorescens_SBW25 0
Sulfolobus_islandicus_Y.N.15.51 0
Methanosaeta_thermophila_PT 0
Methanohalobium_evestigatum_Z-7303 0
Methanocorpusculum_labreanum_Z 0
Methanothermococcus_okinawensis_IH1 0
Methanococcus_maripaludis_C5 0
Methanococcus_vannielii_SB 0
Methanobrevibacter_sp._AbM4 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   6
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   4
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   8
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   11
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   3
Cryptococcus_neoformans_var._grubii_H99_ 0
Cryptococcus_neoformans_B-3501A_ 0
Cryptococcus_neoformans_JEC21_ 0
Paracoccidioides_brasiliensis_Pb01_ 0
Paracoccidioides_brasiliensis_Pb03_ 0
Coccidioides_posadasii_str._Silveira_ 0
Coccidioides_immitis_RMSCC_3703_ 1
Coccidioides_immitis_RMSCC_2394_ 0
Coccidioides_immitis_H538.4_ 0
Ajellomyces_dermatitidis_ER-3_ 0
Histoplasma_capsulatum_H143 0
Histoplasma_capsulatum_H88 0
Histoplasma_capsulatum_G186AR 0
Aspergillus_fumigatus_A1163_ 0
Candida_albicans_WO-1_ 1
Saccharomyces_cerevisiae_UC5 1
Saccharomyces_cerevisiae_PW5 1
Saccharomyces_cerevisiae_FL100 1
Saccharomyces_cerevisiae_CLIB382 1
Saccharomyces_cerevisiae_CLIB324 1
Saccharomyces_cerevisiae_CBS7960 1
Saccharomyces_cerevisiae_YJM269 1
Saccharomyces_cerevisiae_T7 1
Saccharomyces_cerevisiae_FostersB 1
Saccharomyces_cerevisiae_FostersO 1
Saccharomyces_cerevisiae_VL3 1
Saccharomyces_cerevisiae_Vin13 1
Saccharomyces_cerevisiae_LalvinQA23 1
Saccharomyces_cerevisiae_AWRI796 1
Saccharomyces_cerevisiae_Sigma1278b 1
Saccharomyces_cerevisiae_W303 1
Saccharomyces_cerevisiae_JAY291 1
Saccharomyces_cerevisiae_AWRI1631 1
Saccharomyces_cerevisiae_YPS163 1
Saccharomyces_cerevisiae_M22 1
Saccharomyces_cerevisiae_T73 1
Saccharomyces_cerevisiae_CLIB215 1
Saccharomyces_cerevisiae_Y10 0
Saccharomyces_cerevisiae_YJM789_ 1
Saccharomyces_cerevisiae_YJM789 1
Saccharomyces_cerevisiae_RM11-1a 1
Saccharomyces_cerevisiae_RM11-1a_ 1
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   1
Schizosaccharomyces_pombe_972h-_ 1
Batrachochytrium_dendrobatidis_JEL423_ 2
Batrachochytrium_dendrobatidis_JAM81_ 2
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   0
Hordeum_vulgare_22   (Domesticated barley)   4
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0
Trypanosoma_brucei_Lister_427_v4.1 0
Neospora_caninum_Nc-Liverpool_6.2 0
Plasmodium_falciparum_HB3_ 1
Plasmodium_falciparum_Dd2_ 1
Synechococcus_sp._JA-2-3B'a(2-13) 0
Prochlorococcus_marinus_str._NATL2A 0
Candidatus_Mycoplasma_haemominutum_'Birmingham_1' 0
Mycoplasma_genitalium_M2321 0
Mycoplasma_genitalium_M2288 0
Mycoplasma_genitalium_M6282 0
Mycoplasma_genitalium_M6320 0
Streptomyces_albus_J1074 0
Streptomyces_davawensis_JCM_4913 0
Dehalococcoides_mccartyi_GY50 0
Dehalococcoides_sp._VS 0
Eubacterium_siraeum_V10Sc8a 0
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 0
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 0
Clostridium_pasteurianum_BC1 0
Clostridium_acetobutylicum_DSM_1731 0
Clostridium_acetobutylicum_EA_2018 0
Enterococcus_faecalis_D32 0
Enterococcus_faecalis_V583 0
Lactobacillus_casei_LOCK919 0
Lactobacillus_acidophilus_La-14 0
Lactobacillus_acidophilus_NCFM 0
Streptococcus_pneumoniae_CGSP14 0
Geobacillus_sp._Y4.1MC1 0
Bacillus_toyonensis_BCT-7112 0
Bacillus_thuringiensis_MC28 0
Bacillus_cereus_B4264 0
Bacillus_coagulans_36D1 0
Staphylococcus_pasteuri_SP1 1
Staphylococcus_aureus_08BA02176 0
Staphylococcus_aureus_subsp._aureus_S0385 0
Bacteroides_fragilis_NCTC_9343 0
Nonlabens_dokdonensis_DSW-6 0
Psychroflexus_torquis_ATCC_700755 0
Fibrobacter_succinogenes_subsp._succinogenes_S85 0
Brachyspira_pilosicoli_B2904 0
Borrelia_burgdorferi_JD1 0
Borrelia_burgdorferi_N40 0
Borrelia_burgdorferi_ZS7 0
Campylobacter_jejuni_Waterborne_C.jejuni_Outbreak 0
Campylobacter_jejuni_RM1221 0
Campylobacter_jejuni_subsp._jejuni_00-2544 0
Campylobacter_jejuni_subsp._jejuni_00-2538 0
Campylobacter_jejuni_subsp._jejuni_00-2426 0
Campylobacter_jejuni_subsp._jejuni_00-2425 0
Campylobacter_jejuni_subsp._jejuni_PT14 0
Campylobacter_jejuni_subsp._jejuni_S3 0
Campylobacter_jejuni_subsp._jejuni_M1 0
Campylobacter_jejuni_subsp._jejuni_IA3902 0
Campylobacter_jejuni_subsp._jejuni_81116 0
Campylobacter_jejuni_subsp._jejuni_81-176 0
Campylobacter_jejuni_subsp._jejuni_NCTC_11168-BN148 0
Campylobacter_jejuni_subsp._jejuni_NCTC_11168_=_ATCC_700819 0
Helicobacter_pylori_SouthAfrica20 0
Helicobacter_pylori_UM298 0
Helicobacter_pylori_UM066 0
Helicobacter_pylori_UM037 0
Helicobacter_pylori_UM299 0
Helicobacter_pylori_UM032 0
Helicobacter_pylori_OK310 0
Helicobacter_pylori_OK113 0
Helicobacter_pylori_HUP-B14 0
Helicobacter_pylori_PeCan18 0
Helicobacter_pylori_Shi169 0
Helicobacter_pylori_Shi112 0
Helicobacter_pylori_Shi417 0
Helicobacter_pylori_XZ274 0
Helicobacter_pylori_ELS37 0
Helicobacter_pylori_Gambia94/24 0
Helicobacter_pylori_SouthAfrica7 0
Helicobacter_pylori_2017 0
Helicobacter_pylori_2018 0
Helicobacter_pylori_908 0
Helicobacter_pylori_F57 0
Helicobacter_pylori_F30 0
Helicobacter_pylori_F16 0
Helicobacter_pylori_Cuz20 0
Helicobacter_pylori_SJM180 0
Helicobacter_pylori_B8 0
Helicobacter_pylori_83 0
Helicobacter_pylori_35A 0
Helicobacter_pylori_Shi470 0
Helicobacter_pylori_HPAG1 0
Helicobacter_pylori_51 0
Helicobacter_pylori_F32 0
Helicobacter_pylori_J99 0
Candidatus_Kinetoplastibacterium_crithidii_(ex_Angomonas_deanei_ATCC_30255) 0
Candidatus_Kinetoplastibacterium_crithidii_TCC036E 0
Mannheimia_succiniciproducens_MBEL55E 0
Mannheimia_haemolytica_USMARC_2286 0
Mannheimia_haemolytica_M42548 0
Mannheimia_haemolytica_D174 0
Mannheimia_haemolytica_D171 0
Mannheimia_haemolytica_D153 0
Mannheimia_haemolytica_USDA-ARS-USMARC-183 0
Mannheimia_haemolytica_USDA-ARS-USMARC-185 0
Yersinia_pseudotuberculosis_YPIII 0
Yersinia_pestis_A1122 0
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 0
Yersinia_pestis_Antiqua 0
Yersinia_pestis_KIM10+ 0
Wigglesworthia_glossinidia_endosymbiont_of_Glossina_morsitans_morsitans_(Yale_colony) 0
secondary_endosymbiont_of_Heteropsylla_cubana_Thao2000 0
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 0
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 0
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 0
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 0
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 0
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 0
Salmonella_enterica_serovar_Bovismorbificans_genomics 0
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 0
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 0
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 0
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 0
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 0
Escherichia_coli_ED1a 0
Pseudomonas_denitrificans_ATCC_13867 0
Pseudomonas_putida_H8234 0
Acinetobacter_baumannii_TCDC-AB0715 0
Acinetobacter_baumannii_1656-2 0
Methanosarcina_mazei_Tuc01 0
Ferroplasma_acidarmanus_fer1 0

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   2
Pan_troglodytes_69_2.1.4   (Chimpanzee)   4
Gorilla_gorilla_69_3.1   (Western gorilla)   3
Pongo_abelii_69_2   (Sumatran orangutan)   4
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   2
Macaca_mulatta_69_1   (Rhesus monkey)   4
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   3
Otolemur_garnettii_69_3   (Small-eared galago)   3
Microcebus_murinus_69_1   (Gray mouse lemur)   3
Rattus_norvegicus_69_3.4   (Norway rat)   4
Mus_musculus_69_38   (House mouse)   2
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   3
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   3
Cavia_porcellus_69_3   (Domestic guinea pig)   3
Oryctolagus_cuniculus_69_2   (Rabbit)   4
Ochotona_princeps_69   (American pika)   2
Tupaia_belangeri_69   (Northern tree shrew)   3
Sus_scrofa_69_10.2   (Pig)   8
Bos_taurus_69_3.1   (Cattle)   2
Vicugna_pacos_69_1   (Alpaca)   1
Tursiops_truncatus_69_1   (Bottlenose dolphin)   2
Mustela_putorius_furo_69_1.0   (Domestic ferret)   4
Ailuropoda_melanoleuca_69_1   (Giant panda)   3
Canis_familiaris_69_3.1   (Dog)   1
Felis_catus_69   (Domestic cat)   3
Equus_caballus_69_2   (Horse)   2
Myotis_lucifugus_69_2.0   (Little brown bat)   3
Pteropus_vampyrus_69_1   (Large flying fox)   3
Sorex_araneus_69_1   (European shrew)   1
Erinaceus_europaeus_69   (Western European hedgehog)   1
Procavia_capensis_69_1   (Cape rock hyrax)   2
Loxodonta_africana_69_3   (African savanna elephant)   1
Echinops_telfairi_69   (Small Madagascar hedgehog)   3
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   2
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   1
Macropus_eugenii_69_1.0   (Tammar wallaby)   2
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   4
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   4
Ornithorhynchus_anatinus_69_5   (Platypus)   18
Petromyzon_marinus_69_7.0   (Sea lamprey)   7
Meleagris_gallopavo_69_2   (Turkey)   3
Gallus_gallus_69_2   (Chicken)   2
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   4
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   3
Anolis_carolinensis_69_2.0   (Green anole)   5
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   4
Latimeria_chalumnae_69_1   (Coelacanth)   2
Gadus_morhua_69_1   (Atlantic cod)   5
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   5
Takifugu_rubripes_69_4   (Torafugu)   3
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   4
Oryzias_latipes_69_1   (Japanese medaka)   4
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   2
Oreochromis_niloticus_69_1.0   (Nile tilapia)   0
Danio_rerio_69_9   (Zebrafish)   4
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   8
Ciona_intestinalis_69   (Vase tunicate)   6
Drosophila_melanogaster_69_5   (Fruit fly)   3
Caenorhabditis_elegans_69_215   (Roundworm)   3
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   1
Arabidopsis_thaliana_10   (Thale cress)   0

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   71
Homo_sapiens__(NCBI_version)   (Human)   3
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   2
Heliconius_numata__(Incomplete) 15
Loa_loa_v3.3_(Request)   (Eye worm)   10
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   14
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   4
Moniliophthora_perniciosa_FA553__(Genome_survey) 2
Encephalitozoon_intestinalis__(endoparasite) 1
Encephalitozoon_cuniculi_(endoparasite) 1
Picea_sitchensis__(Incomplete)   (Sitka spruce)   0
Lotus_japonicus__(Early_assembly) 10
Malus_x_domestica_(Duplicate)   (Apple)   1
Ricinus_communis__(Early_assembly)   (Castor bean)   0
Nicotiana_benthamiana_0.4.4_(Early_draft) 3
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   0
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   0
Phoenix_dactylifera__(Early_draft)   (Date palm)   3
NCBI_plasmid_sequences_(Plasmids) 0
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 342
STRING_v9.0.5_(STRING) 357
PDB_chains_(SCOP_1.75)_(PDB) 11
Uniprot_2018_03_genome 4521
NCBI_2017_08_genome 2468
TargetDB__(Targets) 44
Protein_Data_Bank_(all_PDB_sequenc) 151
UniProt__viral_sequences_(Viral) 0
Protozoadb_2010_08_(Protozoadb) 37
NCBI_viral_sequences_(Viral) 0

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