SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 47576,47576,81296,81296,81296,81296,81296,81296 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47576 - Calponin-homology domain, CH-domain
47576 - Calponin-homology domain, CH-domain
81296 - E set domains
81296 - E set domains
81296 - E set domains
81296 - E set domains
81296 - E set domains
81296 - E set domains

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Tursiops_truncatus_76_1   (Bottlenose dolphin)   0
Saccoglossus_kowalevskii_v3.0 0
Crassostrea_gigas_22   (Pacific oyster)   0
Lottia_gigantea_   (Owl limpet)   1
Acyrthosiphon_pisum_   (Pea aphid)   0
Acropora_digitifera_v1.0 0
Nematostella_vectensis_1.0   (Starlet sea anemone)   0
Hydra_vulgaris 0
Amphimedon_queenslandica 0

Longest transcript per gene
Genome     Number
Tursiops_truncatus_69_1   (Bottlenose dolphin)   0

Others
Genome     Number
STRING_v9.0.5_(STRING) 0
Uniprot_2018_03_genome 20
NCBI_2017_08_genome 1

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