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Domain combinations for 47576,_gap_,46966,46966,46966,46966,46966,_gap_,46966,46966,_gap_,46966,46966,_gap_,46966,46966,_gap_,46966,46966 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47576 - Calponin-homology domain, CH-domain
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Papio_anubis_76   (Olive baboon)   0
Macaca_mulatta_76_1   (Rhesus monkey)   0
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   0
Mus_musculus_76_38   (House mouse)   0
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   1

Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   0

Longest transcript per gene
Genome     Number
Macaca_mulatta_69_1   (Rhesus monkey)   0
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   0
Rattus_norvegicus_69_3.4   (Norway rat)   0
Mus_musculus_69_38   (House mouse)   0
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   1

Others
Genome     Number
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   0
STRING_v9.0.5_(STRING) 1
Uniprot_2018_03_genome 333
NCBI_2017_08_genome 6

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