SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for 47986,_gap_,57997,_gap_,50156,_gap_,52540 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47986 - DEATH domain
57997 - Tropomyosin
50156 - PDZ domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1
Ficedula_albicollis_76_1.0   (Collared flycatcher)   1
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   1

Longest transcript per gene
Genome     Number
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 1
Uniprot_2018_03_genome 182
NCBI_2017_08_genome 57

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]