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Domain combinations for 48168,_gap_,51294,55608,51998 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

48168 - R1 subunit of ribonucleotide reductase, N-terminal domain
51294 - Hedgehog/intein (Hint) domain
55608 - Homing endonucleases
51998 - PFL-like glycyl radical enzymes

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Candidatus_Desulforudis_audaxviator_MP104C 0
Desulfitobacterium_hafniense_Y51 0
Mahella_australiensis_50-1_BON 0
Thermoanaerobacterium_xylanolyticum_LX-11 0
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 0
Carboxydothermus_hydrogenoformans_Z-2901 0
Ammonifex_degensii_KC4 1
Thermovirga_lienii_DSM_17291 1
Thermodesulfatator_indicus_DSM_15286 0
Candidatus_Methylomirabilis_oxyfera 0
Desulfovibrio_magneticus_RS-1 0
Azotobacter_vinelandii_DJ 0
Vulcanisaeta_moutnovskia_768-28 1
Pyrobaculum_arsenaticum_DSM_13514 1
Pyrobaculum_oguniense_TE7 1
Thermoproteus_neutrophilus_V24Sta 1
Thermococcus_kodakarensis_KOD1 0
Pyrococcus_horikoshii_OT3 1
Pyrococcus_furiosus_COM1 0

Strains
Genome     Number
Cyanothece_sp._PCC_7822 0
Cyanothece_sp._PCC_7424 0
Desulfitobacterium_hafniense_DCB-2 0
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 0
Rhodothermus_marinus_SG0.5JP17-172 1
Azotobacter_vinelandii_CA6 0
Azotobacter_vinelandii_CA 0
Thermococcus_sp._AM4 0
Thermococcus_litoralis_DSM_5473 1
Pyrococcus_sp._NA2 0
Pyrococcus_furiosus_DSM_3638 0
Ferroplasma_acidarmanus_fer1 1

Others
Genome     Number
UniProt__viral_sequences_(Viral) 2
TargetDB__(Targets) 1
NCBI_viral_sequences_(Viral) 5
STRING_v9.0.5_(STRING) 4
NCBI_2017_08_genome 35
Uniprot_2018_03_genome 1350

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