SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 48452,48452,48452,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

48452 - TPR-like
48452 - TPR-like
48452 - TPR-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   3
Pan_troglodytes_76_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_76_3.1   (Western gorilla)   1
Pongo_abelii_76_2   (Sumatran orangutan)   3
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   1
Papio_anubis_76   (Olive baboon)   1
Macaca_mulatta_76_1   (Rhesus monkey)   1
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   2
Otolemur_garnettii_76_3   (Small-eared galago)   2
Microcebus_murinus_76_1   (Gray mouse lemur)   1
Rattus_norvegicus_76_5.0   (Norway rat)   1
Mus_musculus_76_38   (House mouse)   6
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   0
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   3
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1
Cavia_porcellus_76_3   (Domestic guinea pig)   0
Oryctolagus_cuniculus_76_2   (Rabbit)   1
Ochotona_princeps_76   (American pika)   0
Tupaia_belangeri_76   (Northern tree shrew)   1
Sus_scrofa_76_10.2   (Pig)   2
Bos_taurus_76_3.1   (Cattle)   1
Ovis_aries_76_3.1   (Sheep)   0
Vicugna_pacos_76_1   (Alpaca)   2
Tursiops_truncatus_76_1   (Bottlenose dolphin)   4
Mustela_putorius_furo_76_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_76_1   (Giant panda)   1
Canis_familiaris_76_3.1   (Dog)   1
Felis_catus_76_6.2   (Domestic cat)   0
Equus_caballus_76_2   (Horse)   1
Myotis_lucifugus_76_2.0   (Little brown bat)   3
Pteropus_vampyrus_76_1   (Large flying fox)   1
Sorex_araneus_76_1   (European shrew)   1
Erinaceus_europaeus_76   (Western European hedgehog)   2
Procavia_capensis_76_1   (Cape rock hyrax)   3
Loxodonta_africana_76_3   (African savanna elephant)   0
Echinops_telfairi_76   (Small Madagascar hedgehog)   1
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   0
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   2
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1
Ornithorhynchus_anatinus_76_5   (Platypus)   0
Saccoglossus_kowalevskii_v3.0 4
Petromyzon_marinus_76_7.0   (Sea lamprey)   0
Meleagris_gallopavo_76_2   (Turkey)   0
Gallus_gallus_76_4   (Chicken)   0
Anas_platyrhynchos_76_1.0   (Mallard)   2
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   0
Ficedula_albicollis_76_1.0   (Collared flycatcher)   0
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   1
Anolis_carolinensis_76_2.0   (Green anole)   0
Xenopus_laevis_   (African clawed frog)   2
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   0
Latimeria_chalumnae_76_1   (Coelacanth)   0
Lepisosteus_oculatus_76   (Spotted gar)   0
Gadus_morhua_76_1   (Atlantic cod)   0
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   0
Takifugu_rubripes_76_4   (Torafugu)   1
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   0
Oryzias_latipes_76_1   (Japanese medaka)   2
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   0
Poecilia_formosa_76   (Amazon molly)   1
Oreochromis_niloticus_76_1.0   (Nile tilapia)   0
Astyanax_mexicanus_76   (Mexican tetra)   0
Danio_rerio_76_9   (Zebrafish)   2
Oikopleura_dioica 3
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   1
Ciona_intestinalis_76   (Vase tunicate)   2
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   2
Adineta_vaga 0
Octopus_bimaculoides_280 2
Crassostrea_gigas_22   (Pacific oyster)   2
Lottia_gigantea_   (Owl limpet)   3
Helobdella_robusta_ 2
Capitella_sp._I_ 1
Danaus_plexippus_OGS1.0   (Monarch butterfly)   4
Heliconius_melpomene_   (Postman butterfly)   2
Bombyx_mori_   (Domestic silkworm)   0
Nasonia_vitripennis_   (Jewel wasp)   1
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   1
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   1
Linepithema_humile_v1.1   (Argentine ant)   1
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   0
Solenopsis_invicta_v.2.2.3   (Red fire ant)   0
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   1
Atta_cephalotes_v1.1 1
Camponotus_floridanus_v3.3   (Florida carpenter ant)   1
Lucilia_cuprina   (Australian sheep blowfly)   0
Drosophila_grimshawi_1.3 3
Drosophila_willistoni_1.3 1
Drosophila_pseudoobscura_2.13 0
Drosophila_persimilis_1.3 0
Drosophila_suzukii 1
Drosophila_yakuba_1.3 1
Drosophila_simulans_1.3 1
Drosophila_sechellia_1.3 1
Drosophila_melanogaster_76_5   (Fruit fly)   2
Drosophila_erecta_1.3 2
Drosophila_ananassae_1.3 1
Drosophila_virilis_1.2 1
Drosophila_mojavensis_1.3 1
Megaselia_scalaris_22 0
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   0
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   0
Anopheles_darlingi_22   (American malaria mosquito)   0
Anopheles_gambiae_49_3j   (African malaria mosquito)   2
Tribolium_castaneum_3.0   (Red flour beetle)   2
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   0
Acyrthosiphon_pisum_   (Pea aphid)   0
Rhodnius_prolixus_22 1
Daphnia_pulex_   (Common water flea)   0
Strigamia_maritima_22 1
Sarcoptes_scabiei 1
Tetranychus_urticae_   (Two-spotted spider mite)   1
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   0
Pristionchus_pacificus_ 0
Meloidogyne_incognita_   (Southern root-knot nematode)   0
Meloidogyne_hapla_ 0
Onchocerca_volvulus_22 1
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   2
Caenorhabditis_japonica_ 0
Caenorhabditis_brenneri_ 1
Caenorhabditis_remanei_ 0
Caenorhabditis_elegans_76_235   (Roundworm)   0
Caenorhabditis_briggsae_2 0
Trichinella_spiralis_22 1
Hymenolepis_microstoma_ 0
Echinococcus_multilocularis_ 2
Echinococcus_granulosus_ 2
Taenia_solium_   (Pork tapeworm)   2
Schistosoma_mansoni_ 1
Mnemiopsis_leidyi   (Sea walnut)   1
Thelohanellus_kitauei 2
Acropora_digitifera_v1.0 27
Nematostella_vectensis_1.0   (Starlet sea anemone)   5
Hydra_vulgaris 1
Amphimedon_queenslandica 1
Trichoplax_adhaerens_ 5
Proterospongia_sp._ATCC_50818_ 0
Monosiga_brevicollis_ 1
Sphaeroforma_arctica_JP610_ 0
Capsaspora_owczarzaki_ATCC_30864_ 0
Conidiobolus_coronatus_NRRL28638_v1.0 0
Mortierella_verticillata_NRRL_6337_ 2
Phycomyces_blakesleeanus_ 0
Rhizopus_oryzae_RA_99-880_ 1
Mucor_circinelloides_ 0
Rhizomucor_miehei_CAU432_ 1
Malassezia_globosa_CBS_7966_ 0
Sporisorium_reilianum_22 0
Ustilago_maydis_ 0
Mixia_osmundae_IAM_14324_v1.0 1
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 1
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 0
Melampsora_laricis-populina_ 0
Rhodotorula_graminis_WP1_v1.0 1
Sporobolomyces_roseus_IAM_13481_ 0
Microbotryum_violaceum_22 0
Wallemia_sebi_v1.0 0
Sphaerobolus_stellatus_v1.0 3
Piloderma_croceum_F_1598_v1.0 5
Serpula_lacrymans_var._lacrymans_S7.9_ 1
Coniophora_puteana 0
Hydnomerulius_pinastri_v2.0 1
Paxillus_rubicundulus_Ve08.2h10_v1.0 0
Pisolithus_microcarpus_441_v1.0 3
Pisolithus_tinctorius_Marx_270_v1.0 1
Scleroderma_citrinum_Foug_A_v1.0 1
Coprinopsis_cinerea_okayama7_130_v3 1
Pleurotus_ostreatus_   (Oyster mushroom)   1
Amanita_thiersii_Skay4041_v1.0 2
Amanita_muscaria_Koide_v1.0   (Fly agaric)   2
Galerina_marginata_v1.0 0
Hebeloma_cylindrosporum_h7_v2.0 0
Laccaria_bicolor_S238N-H82_ 2
Agaricus_bisporus_var._bisporus_ 0
Schizophyllum_commune_ 1
Stereum_hirsutum_FP-91666_SS1__v1.0 2
Heterobasidion_annosum_ 3
Gloeophyllum_trabeumv1.0 1
Punctularia_strigosozonata_v1.0 0
Sebacina_vermifera_MAFF_305830_v1.0 0
Fomitiporia_mediterranea_v1.0 2
Tulasnella_calospora_AL13/4D_v1.0 1
Postia_placenta_ 0
Wolfiporia_cocos_MD-104_SS10__v1.0 0
Fomitopsis_pinicolav1.0 5
Fomitopsis_pinicola_FP-58527_SS1_v3.0 4
Phanerochaete_chrysosporium_RP-78_2.1 0
Dichomitus_squalens 1
Trametes_versicolor_v1.0 1
Tremella_mesenterica_   (Witches' butter)   1
Daldinia_eschscholzii_EC12_v1.0 0
Magnaporthe_poae_ATCC_64411_22 2
Magnaporthe_grisea_70-15_ 0
Podospora_anserina_ 0
Sporotrichum_thermophile_ATCC_42464_ 0
Thielavia_terrestris_NRRL_8126_ 0
Chaetomium_globosum_CBS_148.51_ 0
Neurospora_tetrasperma_ 0
Neurospora_discreta_FGSC_8579_ 0
Neurospora_crassa_OR74A_ 0
Cryphonectria_parasitica_   (Chestnut blight fungus)   0
Verticillium_albo-atrum_VaMs.102_ 0
Verticillium_dahliae_VdLs.17_ 0
Acremonium_alcalophilumv_1.0 0
Glomerella_graminicola_22 1
Fusarium_graminearum_ 0
Nectria_haematococca_mpVI_ 0
Fusarium_oxysporum_f._sp._lycopersici_4286_ 1
Fusarium_verticillioides_7600_ 0
Trichoderma_asperellum_CBS_433.97_v1.0 0
Trichoderma_atroviride_ 0
Trichoderma_citrinoviride_v1.0 0
Trichoderma_reesei_1.2 0
Trichoderma_virens_Gv29-8_ 0
Trichoderma_longibrachiatum_ATCC_18648_v1.0 0
Trichoderma_harzianum_CBS_226.95_v1.0 1
Amorphotheca_resinae_v1.0   (Creosote fungus)   0
Botrytis_cinerea_B05.10_ 0
Sclerotinia_sclerotiorum_ 0
Blumeria_graminis_22 0
Didymella_exigua_CBS_183.55_v1.0 0
Leptosphaeria_maculans_22 0
Setosphaeria_turcica_v1.0 1
Cochliobolus_miyabeanus_ATCC_44560_v1.0 0
Cochliobolus_victoriae_FI3_v1.0 0
Cochliobolus_carbonum_26-R-13_v1.0 1
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   0
Alternaria_brassicicola_ 0
Cochliobolus_lunatus_m118_v2.0 1
Pyrenophora_teres_f._teres_22 0
Pyrenophora_tritici-repentis_ 0
Stagonospora_nodorum_ 0
Mycosphaerella_graminicola_IPO323_ 0
Zasmidium_cellare_ATCC_36951_v1.0 0
Dothistroma_septosporum 1
Septoria_musiva_v1.0 0
Mycosphaerella_fijiensis_CIRAD86_ 0
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 1
Paracoccidioides_brasiliensis_Pb18_ 0
Coccidioides_posadasii_RMSCC_3488_ 0
Coccidioides_immitis_RS_ 1
Ajellomyces_dermatitidis_SLH14081_ 1
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 0
Microsporum_canis_CBS_113480_ 0
Trichophyton_equinum_CBS_127.97_ 0
Trichophyton_verrucosum_HKI_0517_ 0
Arthroderma_benhamiae_CBS_112371_ 0
Trichophyton_tonsurans_CBS_112818_ 0
Trichophyton_rubrum_CBS_118892_ 0
Uncinocarpus_reesii_1704_ 0
Penicillium_chrysogenum_Wisconsin_54-1255_ 1
Penicillium_chrysogenum_v1.0 0
Aspergillus_acidus_v1.0 1
Aspergillus_fumigatus_Af293 0
Aspergillus_brasiliensis_v1.0 1
Aspergillus_nidulans_FGSC_A4_ 0
Aspergillus_sydowii_v1.0 0
Aspergillus_versicolor_v1.0 0
Aspergillus_glaucus 0
Aspergillus_carbonarius_ITEM_5010_ 1
Neosartorya_fischeri_NRRL_181_ 0
Aspergillus_terreus_NIH2624_ 0
Aspergillus_tubingensis_v1.0 1
Aspergillus_wentii_v1.0 1
Aspergillus_oryzae_RIB40_ 0
Aspergillus_niger_22 1
Aspergillus_niger_ATCC_1015_ 1
Aspergillus_flavus_NRRL3357_ 0
Aspergillus_clavatus_NRRL_1_ 0
Penicillium_marneffei_ATCC_18224_ 0
Tuber_melanosporum_Mel28_22 0
Tuber_melanosporum_Vittad_   (Perigord truffle)   1
Hansenula_polymorpha_v2.0 3
Dekkera_bruxellensis_CBS_2499_v2.0 1
Pichia_membranifaciensv1.0 1
Candida_tanzawaensis_NRRL_Y-17324__v1.0 1
Candida_dubliniensis_CD36_ 1
Candida_tropicalis_MYA-3404_ 2
Candida_parapsilosis_ 1
Candida_albicans_SC5314 2
Lodderomyces_elongisporus_NRRL_YB-4239_ 0
Babjeviella_inositovora_NRRL_Y-12698_v1.0 1
Pichia_stipitis_CBS_6054_ 0
Candida_guilliermondii_ATCC_6260_ 1
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 1
Debaromyces_hansenii 0
Wickerhamomyces_anomalus 2
Pichia_pastoris_GS115_ 1
Yarrowia_lipolytica_CLIB122 2
Candida_lusitaniae_ATCC_42720_ 0
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 2
Vanderwaltozyma_polyspora_DSM_70294_ 1
Candida_glabrata_CBS138 1
Kluyveromyces_thermotolerans_CBS_6340 1
Lachancea_kluyveri_ 1
Kluyveromyces_waltii 1
Ashbya_gossypii_ATCC_10895_ 1
Zygosaccharomyces_rouxii_ 1
Saccharomyces_paradoxus_MIT 1
Kluyveromyces_lactis 1
Schizosaccharomyces_cryophilus_OY26_22 1
Schizosaccharomyces_octosporus_yFS286_ 1
Schizosaccharomyces_japonicus_yFS275_ 1
Schizosaccharomyces_pombe   (Fission yeast)   2
Catenaria_anguillulae_PL171_v1.0 0
Allomyces_macrogynus_ATCC_38327_ 0
Spizellomyces_punctatus_DAOM_BR117_ 1
Dictyostelium_discoideum 1
Dictyostelium_purpureum_ 2
Entamoeba_dispar_1.2 1
Entamoeba_invadens_1.2 0
Entamoeba_histolytica_1 1
Selaginella_moellendorffii_ 6
Pinus_taeda   (Loblolly pine)   3
Picea_abies   (Norway spruce)   10
Eucalyptus_grandis_v201   (Rose gum)   2
Theobroma_cacao_B97-61/B2_v1   (Cacao)   3
Gossypium_raimondii_v221 10
Citrus_clementina_v165 2
Citrus_sinensis_v154   (Sweet orange)   9
Thellungiella_halophila_v173 5
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   5
Capsella_rubella_v183 3
Arabidopsis_lyrata_   (Lyrate rockcress)   4
Arabidopsis_thaliana_10   (Thale cress)   3
Carica_papaya_   (Papaya)   2
Medicago_truncatula_   (Barrel medic)   4
Phaseolus_vulgaris_v186   (French bean)   2
Glycine_max_v109   (Soybean)   11
Cucumis_sativus_v122   (Cucumber)   4
Fragaria_vesca_   (Wild strawberry)   2
Malus_domestica_v196   (Apple)   4
Prunus_persica_v139   (Peach)   3
Linum_usitatissimum_v200   (Flax)   6
Manihot_esculenta_v147   (Cassava)   6
Populus_trichocarpa_v156   (Black cottonwood)   6
Vitis_vinifera_   (Wine grape)   3
Mimulus_guttatus_v140   (Spotted monkey flower)   3
Solanum_lycopersicum_v.2.3   (Tomato)   4
Solanum_tuberosum_   (Potato)   1
Actinidia_chinensis_Hongyang_ 3
Aquilegia_coerulea_v195 6
Triticum_urartu_22 4
Triticum_aestivum_22   (Bread wheat)   8
Aegilops_tauschii_22 3
Brachypodium_distachyon_   (Stiff brome)   1
Oryza_barthii_22   (African wild rice)   5
Oryza_meridionalis_22 7
Oryza_glumaepatula_22 5
Oryza_glaberrima   (African rice)   2
Oryza_punctata_22 5
Oryza_nivara_22 8
Oryza_brachyantha_22   (Malo sina)   2
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   4
Oryza_sativa_v193   (Rice)   4
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   2
Panicum_virgatum_v202   (Switchgrass)   3
Setaria_italica_v164   (Foxtail millet)   4
Zea_mays_subsp._mays_   (Maize)   4
Zea_mays_v181   (Maize)   4
Sorghum_bicolor_   (Sorghum)   2
Musa_balbisiana   (Balbis banana)   4
Musa_acuminata_22   (Wild Malaysian banana)   3
Amborella_trichopoda_22 4
Physcomitrella_patens 2
Coccomyxa_subellipsoidea_sp._C-169_v2 3
Asterochloris_sp._Cgr/DA1pho_v1.0 1
Chlorella_variabilis_sp._NC64A_ 3
Chlorella_vulgaris_ 1
Volvox_carteri_f._nagariensis_ 0
Volvox_carteri_v199 0
Chlamydomonas_reinhardtii_4.0 2
Ostreococcus_sp._RCC809_ 0
Ostreococcus_lucimarinus_CCE9901_ 0
Ostreococcus_tauri_ 2
Bathycoccus_prasinos_ 1
Micromonas_sp._RCC299_ 1
Micromonas_pusilla_CCMP1545_v3.0 1
Cyanidioschyzon_merolae_strain_10D_22 0
Cyanidioschyzon_merolae 0
Porphyridium_purpureum_02_2012 0
Thecamonas_trahens_ATCC_50062_ 2
Bigelowiella_natans_CCMP2755_22 1
Giardia_lamblia_2.3 0
Cyanophora_paradoxa_ 1
Leishmania_mexicana_2.4 2
Leishmania_major_strain_Friedlin_ 2
Leishmania_infantum_JPCM5_2.4 1
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 2
Trypanosoma_vivax_ 1
Trypanosoma_cruzi_strain_CL_Brener 0
Trypanosoma_brucei_gambiense_v4.1 2
Trypanosoma_brucei_TREU927_v4.1 2
Ectocarpus_siliculosus 3
Aureococcus_anophagefferens_ 4
Albugo_laibachii_22 1
Pythium_iwayamai_DAOM_BR242034_22 2
Pythium_arrhenomanes_ATCC_12531_22 1
Pythium_ultimum_v1.7-2 1
Pythium_aphanidermatum_DAOM_BR444_22 2
Pythium_irregulare_DAOM_BR486_22 1
Pythium_vexans_DAOM_BR484_22 1
Phytophthora_ramorum_1.1   (Sudden oak death agent)   2
Phytophthora_sojae_1.1 2
Phytophthora_infestans_T30-4_ 2
Phytophthora_capsici_ 3
Hyaloperonospora_arabidopsidis_22 1
Phaeodactylum_tricornutumCCAP_1055/1 1
Fragilariopsis_cylindrus 4
Thalassiosira_pseudonana_CCMP1335 4
Perkinsus_marinus_ATCC_50983_ 0
Paramecium_tetraurelia_ 7
Tetrahymena_thermophila_SB210_1_ 5
Ichthyophthirius_multifiliis_strain_G5_ 3
Cryptosporidium_hominis 0
Cryptosporidium_muris 0
Cryptosporidium_parvum_Iowa_II 0
Neospora_caninum 0
Toxoplasma_gondii_VEG 0
Toxoplasma_gondii_ME49 0
Toxoplasma_gondii_GT1 0
Babesia_bovis_T2Bo_ 2
Theileria_parva__ 1
Theileria_annulata 1
Plasmodium_falciparum_3D7_ 0
Plasmodium_vivax_SaI-1_7.0 0
Plasmodium_knowlesi_strain_H_ 0
Plasmodium_yoelii_ssp._yoelii_1_ 0
Plasmodium_chabaudi_ 0
Plasmodium_berghei_ANKA_ 0
Symbiodinium_minutum_clade_B1_v1.2 2
Naegleria_gruberi_ 1
Trichomonas_vaginalis_ 4
Guillardia_theta_CCMP2712_v1.0_ 3
Emiliania_huxleyi_CCMP1516_ 2
Leptolyngbya_sp._PCC_7376 1
Pseudanabaena_sp._PCC_7367 2
Acaryochloris_marina_MBIC11017 0
Synechocystis_sp._PCC_6803 1
Synechococcus_sp._PCC_7502 1
Synechococcus_sp._PCC_6312 0
Microcoleus_sp._PCC_7113 11
Trichodesmium_erythraeum_IMS101 4
Geitlerinema_sp._PCC_7407 2
Cyanothece_sp._PCC_8802 1
Gloeocapsa_sp._PCC_7428 3
Halothece_sp._PCC_7418 1
Microcystis_aeruginosa_NIES-843 0
Gloeobacter_violaceus_PCC_7421 2
Rivularia_sp._PCC_7116 5
Calothrix_sp._PCC_7507 2
Anabaena_variabilis_ATCC_29413 3
Nostoc_sp._PCC_7107 4
Nostoc_punctiforme_PCC_73102 7
Nostoc_sp._PCC_7120 4
Nostoc_sp._PCC_7524 1
Anabaena_sp._90 1
Catenulispora_acidiphila_DSM_44928 0
Frankia_alni_ACN14a 0
Streptomyces_flavogriseus_ATCC_33331 0
Streptomyces_bingchenggensis_BCW-1 0
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 0
Propionibacterium_propionicum_F0230a 0
Verrucosispora_maris_AB-18-032 0
Actinoplanes_sp._N902-109 1
Mycobacterium_abscessus_ATCC_19977 0
Mycobacterium_vanbaalenii_PYR-1 1
Intrasporangium_calvum_DSM_43043 1
Arthrobacter_chlorophenolicus_A6 0
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 1
Anaerolinea_thermophila_UNI-1 0
Herpetosiphon_aurantiacus_DSM_785 0
Chloroflexus_sp._MS-G 1
Chloroflexus_sp._Y-400-fl 0
Chloroflexus_aggregans_DSM_9485 0
Chloroflexus_aurantiacus_J-10-fl 0
Deinococcus_gobiensis_I-0 0
Candidatus_Cloacamonas_acidaminovorans 1
Ignavibacterium_album_JCM_16511 1
Chlorobium_phaeovibrioides_DSM_265 0
Prosthecochloris_aestuarii_DSM_271 0
Haliscomenobacter_hydrossis_DSM_1100 3
Saprospira_grandis_str._Lewin 4
Niastella_koreensis_GR20-10 0
Chitinophaga_pinensis_DSM_2588 1
Rhodothermus_marinus_DSM_4252 1
Flexibacter_litoralis_DSM_6794 1
Cyclobacterium_marinum_DSM_745 0
Marivirga_tractuosa_DSM_4126 3
Fibrella_aestuarina 0
Cytophaga_hutchinsonii_ATCC_33406 2
Prevotella_ruminicola_23 1
Porphyromonas_asaccharolytica_DSM_20707 1
Bacteroides_thetaiotaomicron_VPI-5482 0
Owenweeksia_hongkongensis_DSM_17368 0
Krokinobacter_sp._4H-3-7-5 0
Flavobacterium_psychrophilum_JIP02/86 0
Fibrobacter_succinogenes_subsp._succinogenes_S85 0
Candidatus_Protochlamydia_amoebophila_UWE25 0
Isosphaera_pallida_ATCC_43644 0
Planctomyces_brasiliensis_DSM_5305 1
Rhodopirellula_baltica_SH_1 0
Pirellula_staleyi_DSM_6068 1
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 0
Leptospira_interrogans_serovar_Lai_str._IPAV 0
Brachyspira_murdochii_DSM_12563 1
Brachyspira_intermedia_PWS/A 1
Brachyspira_hyodysenteriae_WA1 2
Spirochaeta_caldaria_DSM_7334 1
Treponema_azotonutricium_ZAS-9 1
Treponema_succinifaciens_DSM_2489 0
Spirochaeta_africana_DSM_8902 0
Calditerrivibrio_nitroreducens_DSM_19672 1
Deferribacter_desulfuricans_SSM1 1
Petrotoga_mobilis_SJ95 1
Sulfurihydrogenibium_azorense_Az-Fu1 0
Candidatus_Chloracidobacterium_thermophilum_B 1
Candidatus_Solibacter_usitatus_Ellin6076 1
Granulicella_tundricola_MP5ACTX9 0
Granulicella_mallensis_MP5ACTX8 0
Candidatus_Koribacter_versatilis_Ellin345 0
Terriglobus_saanensis_SP1PR4 0
Terriglobus_roseus_DSM_18391 0
Candidatus_Nitrospira_defluvii 1
Leptospirillum_ferrooxidans_C2-3 1
Campylobacter_lari_RM2100 1
Campylobacter_curvus_525.92 1
Campylobacter_concisus_13826 1
Campylobacter_fetus_subsp._fetus_82-40 0
Helicobacter_hepaticus_ATCC_51449 1
Desulfobacca_acetoxidans_DSM_11109 0
Desulfomonile_tiedjei_DSM_6799 0
Syntrophobacter_fumaroxidans_MPOB 1
Desulfurivibrio_alkaliphilus_AHT2 1
Desulfovibrio_aespoeensis_Aspo-2 0
Desulfovibrio_africanus_str._Walvis_Bay 1
Geobacter_daltonii_FRC-32 1
Geobacter_sp._M21 0
Geobacter_uraniireducens_Rf4 0
Geobacter_lovleyi_SZ 2
Geobacter_bemidjiensis_Bem 0
Haliangium_ochraceum_DSM_14365 0
Sorangium_cellulosum_'So_ce_56' 0
Anaeromyxobacter_sp._Fw109-5 0
Anaeromyxobacter_dehalogenans_2CP-1 0
Stigmatella_aurantiaca_DW4/3-1 6
Corallococcus_coralloides_DSM_2259 0
Myxococcus_xanthus_DK_1622 0
Myxococcus_fulvus_HW-1 0
Chromobacterium_violaceum_ATCC_12472 0
Methylibium_petroleiphilum_PM1 0
Thiomonas_intermedia_K12 1
Burkholderia_phytofirmans_PsJN 0
Burkholderia_phymatum_STM815 0
Burkholderia_xenovorans_LB400 0
Cupriavidus_metallidurans_CH34 0
Cupriavidus_necator_N-1 0
Polynucleobacter_necessarius_subsp._asymbioticus_QLW-P1DMWA-1 0
Burkholderia_sp._RPE64 1
Burkholderia_sp._CCGE1002 0
Burkholderia_thailandensis_E264 0
Burkholderia_pseudomallei_1106a 0
Burkholderia_ambifaria_AMMD 1
Burkholderia_cenocepacia_HI2424 1
Burkholderia_multivorans_ATCC_17616 0
Burkholderia_vietnamiensis_G4 1
Burkholderia_gladioli_BSR3 1
Burkholderia_glumae_BGR1 1
Delftia_sp._Cs1-4 1
Achromobacter_xylosoxidans 1
Gallionella_capsiferriformans_ES-2 0
Methylotenera_versatilis_301 1
Magnetococcus_marinus_MC-1 0
Parvularcula_bermudensis_HTCC2503 0
Caulobacter_crescentus_NA1000 1
Caulobacter_segnis_ATCC_21756 1
Sphingobium_sp._SYK-6 1
Sphingomonas_wittichii_RW1 2
Tistrella_mobilis_KA081020-065 1
Magnetospirillum_magneticum_AMB-1 0
Azospirillum_lipoferum_4B 2
Gluconacetobacter_xylinus_NBRC_3288 1
Wolbachia_endosymbiont_of_Culex_quinquefasciatus_Pel 0
Rickettsia_parkeri_str._Portsmouth 0
Azorhizobium_caulinodans_ORS_571 1
Bradyrhizobium_japonicum_USDA_110 1
Methylocystis_sp._SC2 0
Saccharophagus_degradans_2-40 1
Teredinibacter_turnerae_T7901 1
Oceanimonas_sp._GK1 1
Photobacterium_profundum_SS9 1
Psychromonas_sp._CNPT3 0
Colwellia_psychrerythraea_34H 1
Pseudoalteromonas_atlantica_T6c 0
Pseudoalteromonas_haloplanktis_TAC125 0
Marinobacter_adhaerens_HP15 0
Marinobacter_hydrocarbonoclasticus_ATCC_49840 2
Marinobacter_aquaeolei_VT8 1
Hahella_chejuensis_KCTC_2396 1
Methylomicrobium_alcaliphilum 1
Rhodanobacter_denitrificans 0
Frateuria_aurantia_DSM_6220 1
Pseudoxanthomonas_suwonensis_11-1 0
Stenotrophomonas_maltophilia_K279a 1
Xanthomonas_axonopodis_pv._citri_str._306 0
Thioalkalivibrio_sulfidophilus_HL-EbGr7 1
Halorhodospira_halophila_SL1 1
Nitrosococcus_watsonii_C-113 0
Legionella_longbeachae_NSW150 1
gamma_proteobacterium_HdN1 1
Edwardsiella_tarda_EIB202 0
Rahnella_sp._Y9602 2
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 1
Yersinia_enterocolitica_subsp._enterocolitica_8081 1
Serratia_sp._AS12 0
Serratia_sp._ATCC_39006 1
Serratia_plymuthica_AS9 0
Serratia_proteamaculans_568 0
Dickeya_dadantii_Ech703 0
Dickeya_zeae_Ech1591 1
Pectobacterium_wasabiae_WPP163 0
Pectobacterium_sp._SCC3193 0
Pectobacterium_atrosepticum_SCRI1043 0
Pectobacterium_carotovorum_subsp._carotovorum_PC1 0
Pantoea_sp._At-9b 1
Pantoea_vagans_C9-1 0
Pantoea_ananatis_LMG_20103 1
Erwinia_sp._Ejp617 0
Erwinia_billingiae_Eb661 2
Erwinia_amylovora_ATCC_49946 1
Escherichia_blattae_DSM_4481 0
Cronobacter_turicensis_z3032 0
Enterobacteriaceae_bacterium_strain_FGI_57 0
Salmonella_bongori_NCTC_12419 0
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 1
Klebsiella_oxytoca_E718 1
Klebsiella_pneumoniae_NTUH-K2044 1
Enterobacter_aerogenes_KCTC_2190 0
Escherichia_fergusonii_ATCC_35469 0
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 1
Enterobacter_sp._R4-368 0
Enterobacter_sp._638 0
Enterobacter_asburiae_LF7a 0
Enterobacter_cloacae_subsp._dissolvens_SDM 0
Citrobacter_rodentium_ICC168 1
Citrobacter_koseri_ATCC_BAA-895 0
Azotobacter_vinelandii_DJ 1
Pseudomonas_sp._TKP 0
Pseudomonas_syringae_pv._tomato_str._DC3000 0
Pseudomonas_fulva_12-X 0
Pseudomonas_fluorescens_SBW25 0
Methanosaeta_harundinacea_6Ac 0
Methanosarcina_barkeri_str._Fusaro 1
Methanosphaerula_palustris_E1-9c 1
Thermoplasmatales_archaeon_BRNA1 0
Methanocaldococcus_fervens_AG86 1
Methanococcus_aeolicus_Nankai-3 1
Aciduliprofundum_boonei_T469 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   2
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   2
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   2
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   0
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   0
Cryptococcus_neoformans_var._grubii_H99_ 0
Cryptococcus_neoformans_B-3501A_ 0
Cryptococcus_neoformans_JEC21_ 1
Paracoccidioides_brasiliensis_Pb01_ 0
Paracoccidioides_brasiliensis_Pb03_ 0
Coccidioides_posadasii_str._Silveira_ 0
Coccidioides_immitis_RMSCC_3703_ 0
Coccidioides_immitis_RMSCC_2394_ 1
Coccidioides_immitis_H538.4_ 0
Ajellomyces_dermatitidis_ER-3_ 0
Histoplasma_capsulatum_H143 0
Histoplasma_capsulatum_H88 0
Histoplasma_capsulatum_G186AR 1
Aspergillus_fumigatus_A1163_ 0
Candida_albicans_WO-1_ 2
Saccharomyces_cerevisiae_UC5 1
Saccharomyces_cerevisiae_PW5 1
Saccharomyces_cerevisiae_FL100 0
Saccharomyces_cerevisiae_FostersB 1
Saccharomyces_cerevisiae_LalvinQA23 1
Schizosaccharomyces_pombe_972h-_ 2
Batrachochytrium_dendrobatidis_JEL423_ 0
Batrachochytrium_dendrobatidis_JAM81_ 0
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   2
Hordeum_vulgare_22   (Domesticated barley)   2
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   2
Trypanosoma_brucei_Lister_427_v4.1 1
Neospora_caninum_Nc-Liverpool_6.2 0
Plasmodium_falciparum_HB3_ 0
Plasmodium_falciparum_Dd2_ 0
Chroococcidiopsis_thermalis_PCC_7203 1
Synechocystis_sp._PCC_6803_substr._PCC-P 1
Synechocystis_sp._PCC_6803_substr._PCC-N 1
Synechocystis_sp._PCC_6803_substr._GT-I 1
Synechocystis_sp._PCC_6803 1
Cyanobium_gracile_PCC_6307 1
Synechococcus_sp._PCC_7002 0
Prochlorococcus_marinus_str._MIT_9313 1
Prochlorococcus_marinus_str._MIT_9303 1
Prochlorococcus_marinus_str._NATL2A 1
Oscillatoria_nigro-viridis_PCC_7112 1
Oscillatoria_acuminata_PCC_6304 8
Arthrospira_platensis_NIES-39 4
Cyanothece_sp._PCC_7822 3
Cyanothece_sp._PCC_7424 3
Cyanothece_sp._ATCC_51142 1
Cyanothece_sp._PCC_8801 1
Cyanobacterium_aponinum_PCC_10605 0
Cyanobacterium_stanieri_PCC_7202 0
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 1
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 1
Stanieria_cyanosphaera_PCC_7437 2
Calothrix_parietina_Calothrix_sp._PCC_6303 6
Cylindrospermum_stagnale_PCC_7417 2
Anabaena_cylindrica_PCC_7122 2
Streptomyces_davawensis_JCM_4913 0
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 0
Saccharothrix_espanaensis_DSM_44229 1
Nocardia_brasiliensis_ATCC_700358 0
Bacillus_thuringiensis_YBT-1518 0
Rhodothermus_marinus_SG0.5JP17-172 1
Porphyromonas_gingivalis_TDC60 0
Psychroflexus_torquis_ATCC_700755 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 0
Singulisphaera_acidiphila_DSM_18658 1
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 0
Leptospira_interrogans_serovar_Lai_str._56601 0
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 0
Brachyspira_pilosicoli_B2904 1
Desulfobacula_toluolica_Tol2 0
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 2
Geobacter_sp._M18 1
Sorangium_cellulosum_So0157-2 0
Anaeromyxobacter_sp._K 0
Anaeromyxobacter_dehalogenans_2CP-C 0
Myxococcus_stipitatus_DSM_14675 0
Burkholderia_phenoliruptrix_BR3459a 0
Burkholderia_sp._YI23 0
Burkholderia_sp._CCGE1003 0
Burkholderia_sp._CCGE1001 0
Burkholderia_sp._KJ006 1
Burkholderia_thailandensis_MSMB121 0
Burkholderia_pseudomallei_MSHR305 0
Burkholderia_pseudomallei_NCTC_13179 0
Burkholderia_pseudomallei_BPC006 0
Burkholderia_pseudomallei_1026b 0
Burkholderia_pseudomallei_668 0
Burkholderia_pseudomallei_K96243 0
Burkholderia_mallei_NCTC_10229 0
Burkholderia_mallei_NCTC_10247 0
Burkholderia_lata 0
Burkholderia_ambifaria_MC40-6 2
Burkholderia_cenocepacia_MC0-3 1
Burkholderia_cenocepacia_AU_1054 1
Burkholderia_cenocepacia_J2315 1
Burkholderia_multivorans_ATCC_17616 0
Burkholderia_cepacia_GG4 0
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 0
Variovorax_paradoxus_EPS 1
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 1
Caulobacter_crescentus_CB15 1
Zymomonas_mobilis_subsp._mobilis_CP4 0
Zymomonas_mobilis_subsp._mobilis_ATCC_10988 0
Zymomonas_mobilis_subsp._pomaceae_ATCC_29192 1
Magnetospirillum_gryphiswaldense_MSR-1_v2 0
Bradyrhizobium_sp._S23321 2
Bradyrhizobium_oligotrophicum_S58 0
Bradyrhizobium_japonicum_USDA_6 1
Actinobacillus_pleuropneumoniae_serovar_3_str._JL03 1
Vibrio_nigripulchritudo_VibrioScope 0
Alteromonas_macleodii_ATCC_27126 0
Stenotrophomonas_maltophilia_D457 1
Stenotrophomonas_maltophilia_JV3 1
Xanthomonas_citri_subsp._citri_Aw12879 0
Xanthomonas_campestris_pv._vesicatoria_str._85-10 0
Xanthomonas_axonopodis_pv._citrumelo_F1 0
Xanthomonas_axonopodis_Xac29-1 0
Xanthomonas_campestris_pv._raphani_756C 0
Proteus_mirabilis_BB2000 2
Edwardsiella_tarda_C07-087 0
Edwardsiella_tarda_FL6-60 0
Rahnella_aquatilis_HX2 1
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 0
Yersinia_enterocolitica_subsp._palearctica_Y11 1
Serratia_sp._AS13 0
Serratia_plymuthica_S13 0
Serratia_plymuthica_4Rx13 0
Serratia_marcescens_WW4 0
Serratia_liquefaciens_ATCC_27592 0
Dickeya_dadantii_Ech586 1
Dickeya_dadantii_3937 0
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 1
Pantoea_ananatis_LMG_5342 0
Pantoea_ananatis_PA13 1
Pantoea_ananatis_AJ13355 1
Erwinia_amylovora_CFBP1430 1
Cronobacter_sakazakii_CMCC_45402 0
Cronobacter_sakazakii_SP291 0
Cronobacter_sakazakii_ATCC_BAA-894 1
Raoultella_ornithinolytica_B6 0
Shigella_boydii_Sb227 0
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 1
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 1
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 1
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 0
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 1
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 1
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 0
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 0
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 1
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 1
Salmonella_enterica_serovar_Bovismorbificans_genomics 1
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 0
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 0
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 0
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 0
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 0
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 0
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 0
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 0
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 0
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 0
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 0
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 1
Klebsiella_oxytoca_KCTC_1686 1
Klebsiella_pneumoniae_JM45 1
Klebsiella_pneumoniae_CG43 1
Klebsiella_pneumoniae_KCTC_2242 1
Klebsiella_pneumoniae_342 2
Klebsiella_pneumoniae_subsp._pneumoniae_1084 1
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 1
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 1
Enterobacter_aerogenes_EA1509E 0
Escherichia_coli_E24377A 2
Escherichia_coli_E._coli_PMV-1 0
Escherichia_coli_JJ1886 1
Escherichia_coli_LY180 0
Escherichia_coli_APEC_O78 0
Escherichia_coli_O7:K1_str._CE10 1
Escherichia_coli_O104:H4_str._2009EL-2050 1
Escherichia_coli_O104:H4_str._2009EL-2071 1
Escherichia_coli_O104:H4_str._2011C-3493 1
Escherichia_coli_NA114 0
Escherichia_coli_P12b 1
Escherichia_coli_str._'clone_D_i2' 1
Escherichia_coli_str._'clone_D_i14' 1
Escherichia_coli_UM146 0
Escherichia_coli_042 0
Escherichia_coli_Xuzhou21 1
Escherichia_coli_IHE3034 1
Escherichia_coli_UMNK88 1
Escherichia_coli_O83:H1_str._NRG_857C 0
Escherichia_coli_ABU_83972 1
Escherichia_coli_KO11FL 0
Escherichia_coli_KO11FL 0
Escherichia_coli_LF82 0
Escherichia_coli_ED1a 0
Escherichia_coli_IAI39 1
Escherichia_coli_55989 1
Escherichia_coli_S88 0
Escherichia_coli_IAI1 1
Escherichia_coli_W 0
Escherichia_coli_W 0
Escherichia_coli_DH1 0
Escherichia_coli_DH1 0
Escherichia_coli_ATCC_8739 1
Escherichia_coli_BL21(DE3) 1
Escherichia_coli_BL21(DE3) 1
Escherichia_coli_SMS-3-5 1
Escherichia_coli_SE15 1
Escherichia_coli_SE11 1
Escherichia_coli_APEC_O1 0
Escherichia_coli_O103:H2_str._12009 1
Escherichia_coli_UTI89 0
Escherichia_coli_ETEC_H10407 0
Escherichia_coli_CFT073 1
Escherichia_coli_O127:H6_str._E2348/69 0
Escherichia_coli_O157:H7_str._TW14359 1
Escherichia_coli_O157:H7_str._EC4115 0
Escherichia_coli_O157:H7_str._Sakai 1
Escherichia_coli_O157:H7_str._EDL933 0
Escherichia_coli_str._K-12_substr._MDS42 0
Escherichia_coli_BW2952 0
Escherichia_coli_str._K-12_substr._MG1655 0
Escherichia_coli_str._K-12_substr._W3110 0
Escherichia_coli_str._K-12_substr._DH10B 0
Escherichia_coli_B_str._REL606 1
Enterobacter_cloacae_SCF1 0
Enterobacter_cloacae_EcWSU1 0
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 0
Azotobacter_vinelandii_CA6 1
Azotobacter_vinelandii_CA 1
Pseudomonas_putida_NBRC_14164 0
Pseudomonas_putida_DOT-T1E 0
Pseudomonas_putida_BIRD-1 0
Pseudomonas_putida_ND6 0
Pseudomonas_putida_KT2440 0
Pseudomonas_putida_GB-1 0
Acinetobacter_genomosp._13TU__RUH2624 1
Methanolobus_psychrophilus_R15 1
Candidatus_Methanomethylophilus_alvus_Mx1201 0

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   1
Pan_troglodytes_69_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_69_3.1   (Western gorilla)   1
Pongo_abelii_69_2   (Sumatran orangutan)   3
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   2
Macaca_mulatta_69_1   (Rhesus monkey)   1
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   1
Otolemur_garnettii_69_3   (Small-eared galago)   2
Microcebus_murinus_69_1   (Gray mouse lemur)   1
Rattus_norvegicus_69_3.4   (Norway rat)   3
Mus_musculus_69_38   (House mouse)   1
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   0
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   2
Cavia_porcellus_69_3   (Domestic guinea pig)   0
Oryctolagus_cuniculus_69_2   (Rabbit)   1
Ochotona_princeps_69   (American pika)   0
Tupaia_belangeri_69   (Northern tree shrew)   1
Sus_scrofa_69_10.2   (Pig)   0
Bos_taurus_69_3.1   (Cattle)   1
Vicugna_pacos_69_1   (Alpaca)   2
Tursiops_truncatus_69_1   (Bottlenose dolphin)   4
Mustela_putorius_furo_69_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_69_1   (Giant panda)   1
Canis_familiaris_69_3.1   (Dog)   1
Felis_catus_69   (Domestic cat)   2
Equus_caballus_69_2   (Horse)   1
Myotis_lucifugus_69_2.0   (Little brown bat)   3
Pteropus_vampyrus_69_1   (Large flying fox)   1
Sorex_araneus_69_1   (European shrew)   1
Erinaceus_europaeus_69   (Western European hedgehog)   2
Procavia_capensis_69_1   (Cape rock hyrax)   3
Loxodonta_africana_69_3   (African savanna elephant)   0
Echinops_telfairi_69   (Small Madagascar hedgehog)   1
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   1
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   1
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   2
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1
Ornithorhynchus_anatinus_69_5   (Platypus)   0
Petromyzon_marinus_69_7.0   (Sea lamprey)   0
Meleagris_gallopavo_69_2   (Turkey)   0
Gallus_gallus_69_2   (Chicken)   1
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   0
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   1
Anolis_carolinensis_69_2.0   (Green anole)   0
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   0
Latimeria_chalumnae_69_1   (Coelacanth)   0
Gadus_morhua_69_1   (Atlantic cod)   0
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   0
Takifugu_rubripes_69_4   (Torafugu)   0
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   0
Oryzias_latipes_69_1   (Japanese medaka)   2
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   0
Oreochromis_niloticus_69_1.0   (Nile tilapia)   0
Danio_rerio_69_9   (Zebrafish)   1
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   1
Ciona_intestinalis_69   (Vase tunicate)   1
Drosophila_melanogaster_69_5   (Fruit fly)   1
Caenorhabditis_elegans_69_215   (Roundworm)   0
Arabidopsis_thaliana_10   (Thale cress)   2

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   3
Homo_sapiens__(NCBI_version)   (Human)   2
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   1
Loa_loa_v3.3_(Request)   (Eye worm)   2
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   2
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   1
Lotus_japonicus__(Early_assembly) 0
Malus_x_domestica_(Duplicate)   (Apple)   4
Ricinus_communis__(Early_assembly)   (Castor bean)   2
Nicotiana_benthamiana_0.4.4_(Early_draft) 3
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   4
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   4
Phoenix_dactylifera__(Early_draft)   (Date palm)   3
NCBI_plasmid_sequences_(Plasmids) 9
Core_Eukaryotic_Genes_458_(CEGMA) 1
Protein_Data_Bank_(all_PDB_sequenc) 8
TargetDB__(Targets) 18
Protozoadb_2010_08_(Protozoadb) 28
STRING_v9.0.5_(STRING) 240
Uniprot_2018_03_genome 29113
NCBI_2017_08_genome 13936
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 8

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