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Domain combinations for 48726,48726,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

48726 - Immunoglobulin
48726 - Immunoglobulin

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   602
Pan_troglodytes_76_2.1.4   (Chimpanzee)   50
Gorilla_gorilla_76_3.1   (Western gorilla)   66
Pongo_abelii_76_2   (Sumatran orangutan)   50
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   47
Papio_anubis_76   (Olive baboon)   46
Macaca_mulatta_76_1   (Rhesus monkey)   81
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   98
Otolemur_garnettii_76_3   (Small-eared galago)   39
Microcebus_murinus_76_1   (Gray mouse lemur)   33
Rattus_norvegicus_76_5.0   (Norway rat)   55
Mus_musculus_76_38   (House mouse)   93
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   11
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   50
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   38
Cavia_porcellus_76_3   (Domestic guinea pig)   41
Oryctolagus_cuniculus_76_2   (Rabbit)   45
Ochotona_princeps_76   (American pika)   18
Tupaia_belangeri_76   (Northern tree shrew)   21
Sus_scrofa_76_10.2   (Pig)   66
Bos_taurus_76_3.1   (Cattle)   61
Ovis_aries_76_3.1   (Sheep)   55
Vicugna_pacos_76_1   (Alpaca)   14
Tursiops_truncatus_76_1   (Bottlenose dolphin)   27
Mustela_putorius_furo_76_1.0   (Domestic ferret)   44
Ailuropoda_melanoleuca_76_1   (Giant panda)   50
Canis_familiaris_76_3.1   (Dog)   56
Felis_catus_76_6.2   (Domestic cat)   46
Equus_caballus_76_2   (Horse)   46
Myotis_lucifugus_76_2.0   (Little brown bat)   56
Pteropus_vampyrus_76_1   (Large flying fox)   34
Sorex_araneus_76_1   (European shrew)   22
Erinaceus_europaeus_76   (Western European hedgehog)   26
Procavia_capensis_76_1   (Cape rock hyrax)   24
Loxodonta_africana_76_3   (African savanna elephant)   43
Echinops_telfairi_76   (Small Madagascar hedgehog)   28
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   72
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   14
Macropus_eugenii_76_1.0   (Tammar wallaby)   18
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   49
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   46
Ornithorhynchus_anatinus_76_5   (Platypus)   20
Saccoglossus_kowalevskii_v3.0 17
Petromyzon_marinus_76_7.0   (Sea lamprey)   6
Meleagris_gallopavo_76_2   (Turkey)   16
Gallus_gallus_76_4   (Chicken)   65
Anas_platyrhynchos_76_1.0   (Mallard)   25
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   14
Ficedula_albicollis_76_1.0   (Collared flycatcher)   24
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   54
Anolis_carolinensis_76_2.0   (Green anole)   15
Xenopus_laevis_   (African clawed frog)   48
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   39
Latimeria_chalumnae_76_1   (Coelacanth)   34
Lepisosteus_oculatus_76   (Spotted gar)   66
Gadus_morhua_76_1   (Atlantic cod)   24
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   49
Takifugu_rubripes_76_4   (Torafugu)   98
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   56
Oryzias_latipes_76_1   (Japanese medaka)   45
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   46
Poecilia_formosa_76   (Amazon molly)   70
Oreochromis_niloticus_76_1.0   (Nile tilapia)   115
Astyanax_mexicanus_76   (Mexican tetra)   65
Danio_rerio_76_9   (Zebrafish)   139
Oikopleura_dioica 0
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   2
Ciona_intestinalis_76   (Vase tunicate)   4
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   27
Adineta_vaga 12
Octopus_bimaculoides_280 3
Crassostrea_gigas_22   (Pacific oyster)   10
Lottia_gigantea_   (Owl limpet)   9
Helobdella_robusta_ 7
Capitella_sp._I_ 0
Danaus_plexippus_OGS1.0   (Monarch butterfly)   6
Heliconius_melpomene_   (Postman butterfly)   8
Bombyx_mori_   (Domestic silkworm)   7
Nasonia_vitripennis_   (Jewel wasp)   4
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   4
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   10
Linepithema_humile_v1.1   (Argentine ant)   9
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   6
Solenopsis_invicta_v.2.2.3   (Red fire ant)   1
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   5
Atta_cephalotes_v1.1 5
Camponotus_floridanus_v3.3   (Florida carpenter ant)   8
Lucilia_cuprina   (Australian sheep blowfly)   3
Drosophila_grimshawi_1.3 6
Drosophila_willistoni_1.3 8
Drosophila_pseudoobscura_2.13 7
Drosophila_persimilis_1.3 6
Drosophila_suzukii 6
Drosophila_yakuba_1.3 6
Drosophila_simulans_1.3 4
Drosophila_sechellia_1.3 7
Drosophila_melanogaster_76_5   (Fruit fly)   16
Drosophila_erecta_1.3 3
Drosophila_ananassae_1.3 3
Drosophila_virilis_1.2 1
Drosophila_mojavensis_1.3 5
Megaselia_scalaris_22 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   7
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   7
Anopheles_darlingi_22   (American malaria mosquito)   3
Anopheles_gambiae_49_3j   (African malaria mosquito)   8
Tribolium_castaneum_3.0   (Red flour beetle)   6
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   7
Acyrthosiphon_pisum_   (Pea aphid)   1
Rhodnius_prolixus_22 3
Daphnia_pulex_   (Common water flea)   10
Strigamia_maritima_22 4
Sarcoptes_scabiei 4
Tetranychus_urticae_   (Two-spotted spider mite)   4
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   12
Pristionchus_pacificus_ 3
Meloidogyne_incognita_   (Southern root-knot nematode)   3
Meloidogyne_hapla_ 1
Onchocerca_volvulus_22 0
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   3
Caenorhabditis_japonica_ 0
Caenorhabditis_brenneri_ 3
Caenorhabditis_remanei_ 1
Caenorhabditis_elegans_76_235   (Roundworm)   2
Caenorhabditis_briggsae_2 1
Trichinella_spiralis_22 0
Hymenolepis_microstoma_ 1
Echinococcus_multilocularis_ 2
Echinococcus_granulosus_ 2
Taenia_solium_   (Pork tapeworm)   3
Schistosoma_mansoni_ 4
Mnemiopsis_leidyi   (Sea walnut)   1
Thelohanellus_kitauei 0
Acropora_digitifera_v1.0 19
Nematostella_vectensis_1.0   (Starlet sea anemone)   5
Hydra_vulgaris 3
Amphimedon_queenslandica 4
Trichoplax_adhaerens_ 0
Proterospongia_sp._ATCC_50818_ 0
Cellulomonas_flavigena_DSM_20109 0
Ruminococcus_albus_7 0
Sulfobacillus_acidophilus_DSM_10332 0
Heliobacterium_modesticaldum_Ice1 0
Cytophaga_hutchinsonii_ATCC_33406 0
Solitalea_canadensis_DSM_3403 0
Owenweeksia_hongkongensis_DSM_17368 0
Polaribacter_sp._MED152 0
Opitutus_terrae_PB90-1 0
Terriglobus_saanensis_SP1PR4 0
Babela_massiliensis 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   62
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   13
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   9
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   2
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   2
Sulfobacillus_acidophilus_TPY 0
Anaeromyxobacter_dehalogenans_2CP-C 0

Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   97
Pan_troglodytes_69_2.1.4   (Chimpanzee)   41
Gorilla_gorilla_69_3.1   (Western gorilla)   41
Pongo_abelii_69_2   (Sumatran orangutan)   45
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   40
Macaca_mulatta_69_1   (Rhesus monkey)   40
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   39
Otolemur_garnettii_69_3   (Small-eared galago)   38
Microcebus_murinus_69_1   (Gray mouse lemur)   33
Rattus_norvegicus_69_3.4   (Norway rat)   46
Mus_musculus_69_38   (House mouse)   49
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   11
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   46
Cavia_porcellus_69_3   (Domestic guinea pig)   38
Oryctolagus_cuniculus_69_2   (Rabbit)   40
Ochotona_princeps_69   (American pika)   18
Tupaia_belangeri_69   (Northern tree shrew)   21
Sus_scrofa_69_10.2   (Pig)   50
Bos_taurus_69_3.1   (Cattle)   55
Vicugna_pacos_69_1   (Alpaca)   14
Tursiops_truncatus_69_1   (Bottlenose dolphin)   27
Mustela_putorius_furo_69_1.0   (Domestic ferret)   43
Ailuropoda_melanoleuca_69_1   (Giant panda)   48
Canis_familiaris_69_3.1   (Dog)   42
Felis_catus_69   (Domestic cat)   26
Equus_caballus_69_2   (Horse)   45
Myotis_lucifugus_69_2.0   (Little brown bat)   53
Pteropus_vampyrus_69_1   (Large flying fox)   34
Sorex_araneus_69_1   (European shrew)   22
Erinaceus_europaeus_69   (Western European hedgehog)   26
Procavia_capensis_69_1   (Cape rock hyrax)   24
Loxodonta_africana_69_3   (African savanna elephant)   31
Echinops_telfairi_69   (Small Madagascar hedgehog)   28
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   22
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   14
Macropus_eugenii_69_1.0   (Tammar wallaby)   18
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   40
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   45
Ornithorhynchus_anatinus_69_5   (Platypus)   19
Petromyzon_marinus_69_7.0   (Sea lamprey)   5
Meleagris_gallopavo_69_2   (Turkey)   15
Gallus_gallus_69_2   (Chicken)   78
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   13
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   46
Anolis_carolinensis_69_2.0   (Green anole)   9
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   27
Latimeria_chalumnae_69_1   (Coelacanth)   30
Gadus_morhua_69_1   (Atlantic cod)   19
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   44
Takifugu_rubripes_69_4   (Torafugu)   43
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   44
Oryzias_latipes_69_1   (Japanese medaka)   39
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   46
Oreochromis_niloticus_69_1.0   (Nile tilapia)   99
Danio_rerio_69_9   (Zebrafish)   107
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   2
Ciona_intestinalis_69   (Vase tunicate)   3
Drosophila_melanogaster_69_5   (Fruit fly)   2
Caenorhabditis_elegans_69_215   (Roundworm)   1

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   371
Homo_sapiens__(NCBI_version)   (Human)   122
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   49
Heliconius_numata__(Incomplete) 1
Loa_loa_v3.3_(Request)   (Eye worm)   0
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   5
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   0
NCBI_plasmid_sequences_(Plasmids) 0
TargetDB__(Targets) 202
STRING_v9.0.5_(STRING) 1103
Uniprot_2018_03_genome 49435
UniProt__viral_sequences_(Viral) 17
NCBI_2017_08_genome 19875
Protein_Data_Bank_(all_PDB_sequenc) 13
PDB_chains_(SCOP_1.75)_(PDB) 2
NCBI_viral_sequences_(Viral) 6

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