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Domain combinations for 49785,57184,49265,_gap_,56112,47769 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49785 - Galactose-binding domain-like
57184 - Growth factor receptor domain
49265 - Fibronectin type III
56112 - Protein kinase-like (PK-like)
47769 - SAM/Pointed domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   6
Pan_troglodytes_76_2.1.4   (Chimpanzee)   3
Gorilla_gorilla_76_3.1   (Western gorilla)   4
Pongo_abelii_76_2   (Sumatran orangutan)   2
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   1
Papio_anubis_76   (Olive baboon)   2
Macaca_mulatta_76_1   (Rhesus monkey)   2
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   5
Otolemur_garnettii_76_3   (Small-eared galago)   2
Microcebus_murinus_76_1   (Gray mouse lemur)   3
Rattus_norvegicus_76_5.0   (Norway rat)   2
Mus_musculus_76_38   (House mouse)   6
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   3
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   4
Cavia_porcellus_76_3   (Domestic guinea pig)   2
Oryctolagus_cuniculus_76_2   (Rabbit)   3
Ochotona_princeps_76   (American pika)   3
Tupaia_belangeri_76   (Northern tree shrew)   0
Sus_scrofa_76_10.2   (Pig)   3
Bos_taurus_76_3.1   (Cattle)   2
Ovis_aries_76_3.1   (Sheep)   1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   0
Mustela_putorius_furo_76_1.0   (Domestic ferret)   4
Ailuropoda_melanoleuca_76_1   (Giant panda)   1
Canis_familiaris_76_3.1   (Dog)   2
Felis_catus_76_6.2   (Domestic cat)   2
Equus_caballus_76_2   (Horse)   4
Myotis_lucifugus_76_2.0   (Little brown bat)   4
Pteropus_vampyrus_76_1   (Large flying fox)   0
Sorex_araneus_76_1   (European shrew)   2
Erinaceus_europaeus_76   (Western European hedgehog)   2
Procavia_capensis_76_1   (Cape rock hyrax)   1
Loxodonta_africana_76_3   (African savanna elephant)   5
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   1
Macropus_eugenii_76_1.0   (Tammar wallaby)   1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   2
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   2
Petromyzon_marinus_76_7.0   (Sea lamprey)   2
Meleagris_gallopavo_76_2   (Turkey)   4
Gallus_gallus_76_4   (Chicken)   3
Anas_platyrhynchos_76_1.0   (Mallard)   2
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   3
Ficedula_albicollis_76_1.0   (Collared flycatcher)   4
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   2
Anolis_carolinensis_76_2.0   (Green anole)   3
Xenopus_laevis_   (African clawed frog)   13
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   1
Latimeria_chalumnae_76_1   (Coelacanth)   1
Lepisosteus_oculatus_76   (Spotted gar)   3
Gadus_morhua_76_1   (Atlantic cod)   5
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   4
Takifugu_rubripes_76_4   (Torafugu)   38
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   13
Oryzias_latipes_76_1   (Japanese medaka)   13
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   5
Poecilia_formosa_76   (Amazon molly)   4
Oreochromis_niloticus_76_1.0   (Nile tilapia)   7
Astyanax_mexicanus_76   (Mexican tetra)   4
Danio_rerio_76_9   (Zebrafish)   5
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   6
Ciona_intestinalis_76   (Vase tunicate)   1
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   1
Adineta_vaga 2
Crassostrea_gigas_22   (Pacific oyster)   0
Capitella_sp._I_ 1
Nasonia_vitripennis_   (Jewel wasp)   1
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   2
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   1
Drosophila_willistoni_1.3 1
Drosophila_persimilis_1.3 0
Drosophila_yakuba_1.3 1
Drosophila_mojavensis_1.3 0
Rhodnius_prolixus_22 1
Tetranychus_urticae_   (Two-spotted spider mite)   0
Amphimedon_queenslandica 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   3

Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   2
Pan_troglodytes_69_2.1.4   (Chimpanzee)   3
Gorilla_gorilla_69_3.1   (Western gorilla)   2
Pongo_abelii_69_2   (Sumatran orangutan)   2
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   2
Macaca_mulatta_69_1   (Rhesus monkey)   2
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   2
Otolemur_garnettii_69_3   (Small-eared galago)   2
Microcebus_murinus_69_1   (Gray mouse lemur)   3
Rattus_norvegicus_69_3.4   (Norway rat)   0
Mus_musculus_69_38   (House mouse)   2
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   3
Cavia_porcellus_69_3   (Domestic guinea pig)   2
Oryctolagus_cuniculus_69_2   (Rabbit)   3
Ochotona_princeps_69   (American pika)   3
Tupaia_belangeri_69   (Northern tree shrew)   0
Sus_scrofa_69_10.2   (Pig)   3
Bos_taurus_69_3.1   (Cattle)   2
Tursiops_truncatus_69_1   (Bottlenose dolphin)   0
Mustela_putorius_furo_69_1.0   (Domestic ferret)   4
Ailuropoda_melanoleuca_69_1   (Giant panda)   1
Canis_familiaris_69_3.1   (Dog)   2
Felis_catus_69   (Domestic cat)   2
Equus_caballus_69_2   (Horse)   4
Myotis_lucifugus_69_2.0   (Little brown bat)   4
Pteropus_vampyrus_69_1   (Large flying fox)   0
Sorex_araneus_69_1   (European shrew)   2
Erinaceus_europaeus_69   (Western European hedgehog)   2
Procavia_capensis_69_1   (Cape rock hyrax)   1
Loxodonta_africana_69_3   (African savanna elephant)   4
Macropus_eugenii_69_1.0   (Tammar wallaby)   1
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   2
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   2
Petromyzon_marinus_69_7.0   (Sea lamprey)   2
Meleagris_gallopavo_69_2   (Turkey)   3
Gallus_gallus_69_2   (Chicken)   3
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   3
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   2
Anolis_carolinensis_69_2.0   (Green anole)   3
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   1
Latimeria_chalumnae_69_1   (Coelacanth)   1
Gadus_morhua_69_1   (Atlantic cod)   5
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   3
Takifugu_rubripes_69_4   (Torafugu)   4
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   7
Oryzias_latipes_69_1   (Japanese medaka)   9
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   5
Oreochromis_niloticus_69_1.0   (Nile tilapia)   5
Danio_rerio_69_9   (Zebrafish)   5
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   2
Ciona_intestinalis_69   (Vase tunicate)   1

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   5
Homo_sapiens__(NCBI_version)   (Human)   4
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   2
TargetDB__(Targets) 1
STRING_v9.0.5_(STRING) 73
Uniprot_2018_03_genome 11193
NCBI_2017_08_genome 1588

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