SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 49899,56112 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49899 - Concanavalin A-like lectins/glucanases
56112 - Protein kinase-like (PK-like)

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Octopus_bimaculoides_280 0
Crassostrea_gigas_22   (Pacific oyster)   0
Mnemiopsis_leidyi   (Sea walnut)   0
Amphimedon_queenslandica 1
Selaginella_moellendorffii_ 6
Pinus_taeda   (Loblolly pine)   17
Picea_abies   (Norway spruce)   18
Eucalyptus_grandis_v201   (Rose gum)   54
Theobroma_cacao_B97-61/B2_v1   (Cacao)   7
Gossypium_raimondii_v221 23
Citrus_clementina_v165 11
Citrus_sinensis_v154   (Sweet orange)   11
Thellungiella_halophila_v173 8
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   22
Capsella_rubella_v183 8
Arabidopsis_lyrata_   (Lyrate rockcress)   24
Arabidopsis_thaliana_10   (Thale cress)   10
Carica_papaya_   (Papaya)   6
Medicago_truncatula_   (Barrel medic)   14
Phaseolus_vulgaris_v186   (French bean)   8
Glycine_max_v109   (Soybean)   25
Cucumis_sativus_v122   (Cucumber)   5
Fragaria_vesca_   (Wild strawberry)   11
Malus_domestica_v196   (Apple)   30
Prunus_persica_v139   (Peach)   13
Linum_usitatissimum_v200   (Flax)   14
Manihot_esculenta_v147   (Cassava)   13
Populus_trichocarpa_v156   (Black cottonwood)   13
Vitis_vinifera_   (Wine grape)   16
Mimulus_guttatus_v140   (Spotted monkey flower)   5
Solanum_lycopersicum_v.2.3   (Tomato)   6
Solanum_tuberosum_   (Potato)   10
Actinidia_chinensis_Hongyang_ 6
Aquilegia_coerulea_v195 7
Triticum_urartu_22 27
Triticum_aestivum_22   (Bread wheat)   24
Aegilops_tauschii_22 25
Brachypodium_distachyon_   (Stiff brome)   10
Oryza_barthii_22   (African wild rice)   14
Oryza_meridionalis_22 11
Oryza_glumaepatula_22 13
Oryza_glaberrima   (African rice)   8
Oryza_punctata_22 16
Oryza_nivara_22 13
Oryza_brachyantha_22   (Malo sina)   9
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   14
Oryza_sativa_v193   (Rice)   14
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   14
Panicum_virgatum_v202   (Switchgrass)   61
Setaria_italica_v164   (Foxtail millet)   14
Zea_mays_subsp._mays_   (Maize)   3
Zea_mays_v181   (Maize)   3
Sorghum_bicolor_   (Sorghum)   6
Musa_balbisiana   (Balbis banana)   8
Musa_acuminata_22   (Wild Malaysian banana)   23
Amborella_trichopoda_22 9
Thecamonas_trahens_ATCC_50062_ 0

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Strains
Genome     Number
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   8
Hordeum_vulgare_22   (Domesticated barley)   23
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   10

Longest transcript per gene
Genome     Number
Arabidopsis_thaliana_10   (Thale cress)   10

Others
Genome     Number
Picea_sitchensis__(Incomplete)   (Sitka spruce)   1
Lotus_japonicus__(Early_assembly) 11
Malus_x_domestica_(Duplicate)   (Apple)   30
Ricinus_communis__(Early_assembly)   (Castor bean)   12
Nicotiana_benthamiana_0.4.4_(Early_draft) 15
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   6
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   6
Phoenix_dactylifera__(Early_draft)   (Date palm)   3
STRING_v9.0.5_(STRING) 103
NCBI_2017_08_genome 738
Uniprot_2018_03_genome 3924

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