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Domain combinations for 50969,50978,50978 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

50969 - YVTN repeat-like/Quinoprotein amine dehydrogenase
50978 - WD40 repeat-like
50978 - WD40 repeat-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   0
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   0
Mustela_putorius_furo_76_1.0   (Domestic ferret)   0
Equus_caballus_76_2   (Horse)   0
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   1
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   0
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   0
Linepithema_humile_v1.1   (Argentine ant)   0
Atta_cephalotes_v1.1 0
Schistosoma_mansoni_ 0
Proterospongia_sp._ATCC_50818_ 0
Mortierella_verticillata_NRRL_6337_ 0
Piloderma_croceum_F_1598_v1.0 0
Amanita_muscaria_Koide_v1.0   (Fly agaric)   0
Sebacina_vermifera_MAFF_305830_v1.0 0
Tremella_mesenterica_   (Witches' butter)   0
Cochliobolus_carbonum_26-R-13_v1.0 0
Candida_tanzawaensis_NRRL_Y-17324__v1.0 0
Candida_parapsilosis_ 0
Carica_papaya_   (Papaya)   0
Brachypodium_distachyon_   (Stiff brome)   1
Oryza_nivara_22 1
Zea_mays_subsp._mays_   (Maize)   1
Zea_mays_v181   (Maize)   1
Sorghum_bicolor_   (Sorghum)   1
Physcomitrella_patens 0
Micromonas_pusilla_CCMP1545_v3.0 1
Cyanophora_paradoxa_ 0
Trypanosoma_vivax_ 0
Trypanosoma_cruzi_strain_CL_Brener 0
Trypanosoma_congolense_2.4 1
Trypanosoma_brucei_gambiense_v4.1 0
Pythium_iwayamai_DAOM_BR242034_22 0
Paramecium_tetraurelia_ 0
Gloeobacter_violaceus_PCC_7421 0
Frankia_symbiont_of_Datisca_glomerata 0

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Strains
Genome     Number
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   1
Trypanosoma_brucei_Lister_427_v4.1 0
Crinalium_epipsammum_PCC_9333 0
Anabaena_cylindrica_PCC_7122 0

Longest transcript per gene
Genome     Number
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   0
Mustela_putorius_furo_69_1.0   (Domestic ferret)   0
Equus_caballus_69_2   (Horse)   0
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   0

Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 0
NCBI_2017_08_genome 10
Uniprot_2018_03_genome 115
Protozoadb_2010_08_(Protozoadb) 0
STRING_v9.0.5_(STRING) 4

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