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Domain combinations for 50969,50998,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

50969 - YVTN repeat-like/Quinoprotein amine dehydrogenase
50998 - Quinoprotein alcohol dehydrogenase-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   3
Rattus_norvegicus_76_5.0   (Norway rat)   0
Ailuropoda_melanoleuca_76_1   (Giant panda)   1
Equus_caballus_76_2   (Horse)   1
Loxodonta_africana_76_3   (African savanna elephant)   1
Echinops_telfairi_76   (Small Madagascar hedgehog)   1
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   1
Oryzias_latipes_76_1   (Japanese medaka)   1
Helobdella_robusta_ 0
Capitella_sp._I_ 0
Drosophila_mojavensis_1.3 0
Rhizopus_oryzae_RA_99-880_ 1
Serpula_lacrymans_var._lacrymans_S7.9_ 1
Coniophora_puteana 1
Pisolithus_microcarpus_441_v1.0 1
Magnaporthe_poae_ATCC_64411_22 0
Acremonium_alcalophilumv_1.0 1
Trichoderma_harzianum_CBS_226.95_v1.0 0
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1
Trichophyton_verrucosum_HKI_0517_ 1
Arthroderma_benhamiae_CBS_112371_ 1
Trichophyton_tonsurans_CBS_112818_ 1
Penicillium_chrysogenum_Wisconsin_54-1255_ 0
Candida_lusitaniae_ATCC_42720_ 1
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1
Selaginella_moellendorffii_ 2
Citrus_sinensis_v154   (Sweet orange)   0
Glycine_max_v109   (Soybean)   0
Malus_domestica_v196   (Apple)   0
Setaria_italica_v164   (Foxtail millet)   0
Physcomitrella_patens 1
Ostreococcus_tauri_ 0
Micromonas_pusilla_CCMP1545_v3.0 0
Leishmania_mexicana_2.4 1
Perkinsus_marinus_ATCC_50983_ 1
Paramecium_tetraurelia_ 0
Symbiodinium_minutum_clade_B1_v1.2 0
Trichomonas_vaginalis_ 0
Stackebrandtia_nassauensis_DSM_44728 1
Gordonia_polyisoprenivorans_VH2 0
Herpetosiphon_aurantiacus_DSM_785 0

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Strains
Genome     Number
Histoplasma_capsulatum_H88 1
Batrachochytrium_dendrobatidis_JAM81_ 0

Longest transcript per gene
Genome     Number
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   2
Ailuropoda_melanoleuca_69_1   (Giant panda)   1
Equus_caballus_69_2   (Horse)   1
Loxodonta_africana_69_3   (African savanna elephant)   1
Echinops_telfairi_69   (Small Madagascar hedgehog)   1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   1
Oryzias_latipes_69_1   (Japanese medaka)   1

Others
Genome     Number
Malus_x_domestica_(Duplicate)   (Apple)   0
Protozoadb_2010_08_(Protozoadb) 2
STRING_v9.0.5_(STRING) 4
NCBI_2017_08_genome 72
Uniprot_2018_03_genome 420

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