SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 50978,50978,48452,48452,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

50978 - WD40 repeat-like
50978 - WD40 repeat-like
48452 - TPR-like
48452 - TPR-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Drosophila_persimilis_1.3 0
Drosophila_melanogaster_76_5   (Fruit fly)   2
Drosophila_erecta_1.3 1
Drosophila_ananassae_1.3 0
Drosophila_virilis_1.2 1

Strains
Genome     Number
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   2
Batrachochytrium_dendrobatidis_JAM81_ 1
Oscillatoria_acuminata_PCC_6304 0

Longest transcript per gene
Genome     Number
Drosophila_melanogaster_69_5   (Fruit fly)   1

Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 0
TargetDB__(Targets) 2
STRING_v9.0.5_(STRING) 2
Uniprot_2018_03_genome 208
NCBI_2017_08_genome 21

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