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Domain combinations for 50978,50978,48452,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

50978 - WD40 repeat-like
50978 - WD40 repeat-like
48452 - TPR-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Saccoglossus_kowalevskii_v3.0 1
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   2
Oryzias_latipes_76_1   (Japanese medaka)   1
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   1
Adineta_vaga 2
Crassostrea_gigas_22   (Pacific oyster)   1
Lottia_gigantea_   (Owl limpet)   1
Nasonia_vitripennis_   (Jewel wasp)   1
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   3
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   1
Atta_cephalotes_v1.1 1
Drosophila_willistoni_1.3 1
Drosophila_pseudoobscura_2.13 1
Drosophila_persimilis_1.3 1
Drosophila_yakuba_1.3 1
Drosophila_melanogaster_76_5   (Fruit fly)   2
Drosophila_virilis_1.2 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   1
Anopheles_gambiae_49_3j   (African malaria mosquito)   1
Tribolium_castaneum_3.0   (Red flour beetle)   1
Daphnia_pulex_   (Common water flea)   1
Echinococcus_granulosus_ 1
Schistosoma_mansoni_ 3
Chlamydomonas_reinhardtii_4.0 1
Bigelowiella_natans_CCMP2755_22 0
Leishmania_infantum_JPCM5_2.4 1
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1
Trypanosoma_cruzi_strain_CL_Brener 0
Trypanosoma_brucei_gambiense_v4.1 1
Trypanosoma_brucei_TREU927_v4.1 1
Albugo_laibachii_22 2
Pythium_aphanidermatum_DAOM_BR444_22 1
Pythium_irregulare_DAOM_BR486_22 1
Pythium_vexans_DAOM_BR484_22 1
Phytophthora_ramorum_1.1   (Sudden oak death agent)   1
Phytophthora_sojae_1.1 1
Phytophthora_infestans_T30-4_ 0
Phytophthora_capsici_ 1
Naegleria_gruberi_ 1

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   3
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   1
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   1
Batrachochytrium_dendrobatidis_JAM81_ 1
Trypanosoma_brucei_Lister_427_v4.1 1
Singulisphaera_acidiphila_DSM_18658 0

Longest transcript per gene
Genome     Number
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   1
Oryzias_latipes_69_1   (Japanese medaka)   1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   1
Drosophila_melanogaster_69_5   (Fruit fly)   1

Others
Genome     Number
Protozoadb_2010_08_(Protozoadb) 3
STRING_v9.0.5_(STRING) 17
NCBI_2017_08_genome 103
Uniprot_2018_03_genome 1341

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