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Domain combinations for 50978,50978,50998,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

50978 - WD40 repeat-like
50978 - WD40 repeat-like
50998 - Quinoprotein alcohol dehydrogenase-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Rattus_norvegicus_76_5.0   (Norway rat)   1
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   0
Bos_taurus_76_3.1   (Cattle)   0
Ovis_aries_76_3.1   (Sheep)   0
Canis_familiaris_76_3.1   (Dog)   0
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   0
Astyanax_mexicanus_76   (Mexican tetra)   0
Danio_rerio_76_9   (Zebrafish)   0
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   0
Schistosoma_mansoni_ 1
Proterospongia_sp._ATCC_50818_ 1
Capsaspora_owczarzaki_ATCC_30864_ 1
Conidiobolus_coronatus_NRRL28638_v1.0 1
Malassezia_globosa_CBS_7966_ 2
Magnaporthe_poae_ATCC_64411_22 1
Acremonium_alcalophilumv_1.0 1
Glomerella_graminicola_22 1
Ajellomyces_dermatitidis_SLH14081_ 1
Candida_dubliniensis_CD36_ 1
Candida_tropicalis_MYA-3404_ 1
Candida_parapsilosis_ 1
Candida_albicans_SC5314 1
Lodderomyces_elongisporus_NRRL_YB-4239_ 1
Candida_guilliermondii_ATCC_6260_ 1
Kluyveromyces_thermotolerans_CBS_6340 1
Lachancea_kluyveri_ 1
Zygosaccharomyces_rouxii_ 1
Saccharomyces_paradoxus_MIT 1
Saccharomyces_cerevisiae_76   (Baker's yeast)   1
Spizellomyces_punctatus_DAOM_BR117_ 1
Gossypium_raimondii_v221 1
Citrus_clementina_v165 1
Medicago_truncatula_   (Barrel medic)   0
Glycine_max_v109   (Soybean)   1
Pythium_vexans_DAOM_BR484_22 0
Paramecium_tetraurelia_ 0
Tetrahymena_thermophila_SB210_1_ 0
Cryptosporidium_hominis 1
Plasmodium_yoelii_ssp._yoelii_1_ 1
Plasmodium_chabaudi_ 1

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Strains
Genome     Number
Paracoccidioides_brasiliensis_Pb03_ 1
Candida_albicans_WO-1_ 1
Saccharomyces_cerevisiae_UC5 1
Saccharomyces_cerevisiae_PW5 1
Saccharomyces_cerevisiae_CLIB324 1
Saccharomyces_cerevisiae_CBS7960 1
Saccharomyces_cerevisiae_YJM269 1
Saccharomyces_cerevisiae_T7 1
Saccharomyces_cerevisiae_VL3 1
Saccharomyces_cerevisiae_AWRI796 1
Saccharomyces_cerevisiae_Sigma1278b 1
Saccharomyces_cerevisiae_W303 1
Saccharomyces_cerevisiae_JAY291 1
Saccharomyces_cerevisiae_AWRI1631 1
Saccharomyces_cerevisiae_YJM789_ 1
Saccharomyces_cerevisiae_YJM789 1
Saccharomyces_cerevisiae_RM11-1a 1
Saccharomyces_cerevisiae_RM11-1a_ 1
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   1

Longest transcript per gene
Genome     Number
Rattus_norvegicus_69_3.4   (Norway rat)   1
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   0
Oryctolagus_cuniculus_69_2   (Rabbit)   1
Bos_taurus_69_3.1   (Cattle)   0
Canis_familiaris_69_3.1   (Dog)   0
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   0
Danio_rerio_69_9   (Zebrafish)   0
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   1

Others
Genome     Number
Nicotiana_benthamiana_0.4.4_(Early_draft) 0
STRING_v9.0.5_(STRING) 10
NCBI_2017_08_genome 54
Uniprot_2018_03_genome 1134
Core_Eukaryotic_Genes_458_(CEGMA) 1
Protozoadb_2010_08_(Protozoadb) 2
Protein_Data_Bank_(all_PDB_sequenc) 3

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