SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain combinations for 51905,51905,55424 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

51905 - FAD/NAD(P)-binding domain
51905 - FAD/NAD(P)-binding domain
55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   2
Pan_troglodytes_76_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_76_3.1   (Western gorilla)   0
Pongo_abelii_76_2   (Sumatran orangutan)   0
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   0
Papio_anubis_76   (Olive baboon)   1
Macaca_mulatta_76_1   (Rhesus monkey)   0
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   3
Otolemur_garnettii_76_3   (Small-eared galago)   1
Microcebus_murinus_76_1   (Gray mouse lemur)   0
Rattus_norvegicus_76_5.0   (Norway rat)   2
Mus_musculus_76_38   (House mouse)   1
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   2
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   0
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   0
Cavia_porcellus_76_3   (Domestic guinea pig)   1
Oryctolagus_cuniculus_76_2   (Rabbit)   0
Tupaia_belangeri_76   (Northern tree shrew)   0
Sus_scrofa_76_10.2   (Pig)   0
Bos_taurus_76_3.1   (Cattle)   0
Ovis_aries_76_3.1   (Sheep)   1
Vicugna_pacos_76_1   (Alpaca)   1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   1
Mustela_putorius_furo_76_1.0   (Domestic ferret)   1
Ailuropoda_melanoleuca_76_1   (Giant panda)   0
Canis_familiaris_76_3.1   (Dog)   0
Felis_catus_76_6.2   (Domestic cat)   0
Equus_caballus_76_2   (Horse)   0
Myotis_lucifugus_76_2.0   (Little brown bat)   0
Pteropus_vampyrus_76_1   (Large flying fox)   0
Sorex_araneus_76_1   (European shrew)   1
Procavia_capensis_76_1   (Cape rock hyrax)   0
Loxodonta_africana_76_3   (African savanna elephant)   1
Echinops_telfairi_76   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   0
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   1
Macropus_eugenii_76_1.0   (Tammar wallaby)   1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   0
Ornithorhynchus_anatinus_76_5   (Platypus)   1
Saccoglossus_kowalevskii_v3.0 0
Meleagris_gallopavo_76_2   (Turkey)   1
Gallus_gallus_76_4   (Chicken)   0
Anas_platyrhynchos_76_1.0   (Mallard)   0
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   2
Ficedula_albicollis_76_1.0   (Collared flycatcher)   1
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   1
Anolis_carolinensis_76_2.0   (Green anole)   0
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   1
Latimeria_chalumnae_76_1   (Coelacanth)   1
Lepisosteus_oculatus_76   (Spotted gar)   0
Gadus_morhua_76_1   (Atlantic cod)   0
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   0
Takifugu_rubripes_76_4   (Torafugu)   3
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   1
Oryzias_latipes_76_1   (Japanese medaka)   0
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   0
Poecilia_formosa_76   (Amazon molly)   0
Oreochromis_niloticus_76_1.0   (Nile tilapia)   0
Astyanax_mexicanus_76   (Mexican tetra)   0
Danio_rerio_76_9   (Zebrafish)   0
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   2
Ciona_intestinalis_76   (Vase tunicate)   1
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   0
Adineta_vaga 0
Octopus_bimaculoides_280 0
Lottia_gigantea_   (Owl limpet)   1
Capitella_sp._I_ 0
Heliconius_melpomene_   (Postman butterfly)   0
Bombyx_mori_   (Domestic silkworm)   0
Nasonia_vitripennis_   (Jewel wasp)   0
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   0
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   0
Linepithema_humile_v1.1   (Argentine ant)   1
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   0
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   0
Atta_cephalotes_v1.1 0
Camponotus_floridanus_v3.3   (Florida carpenter ant)   0
Lucilia_cuprina   (Australian sheep blowfly)   0
Drosophila_grimshawi_1.3 0
Drosophila_willistoni_1.3 0
Drosophila_pseudoobscura_2.13 0
Drosophila_persimilis_1.3 0
Drosophila_suzukii 0
Drosophila_yakuba_1.3 0
Drosophila_simulans_1.3 0
Drosophila_sechellia_1.3 0
Drosophila_melanogaster_76_5   (Fruit fly)   0
Drosophila_erecta_1.3 0
Drosophila_ananassae_1.3 0
Drosophila_virilis_1.2 0
Drosophila_mojavensis_1.3 0
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   0
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   0
Anopheles_darlingi_22   (American malaria mosquito)   0
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   1
Acyrthosiphon_pisum_   (Pea aphid)   0
Rhodnius_prolixus_22 1
Daphnia_pulex_   (Common water flea)   0
Strigamia_maritima_22 0
Sarcoptes_scabiei 2
Tetranychus_urticae_   (Two-spotted spider mite)   0
Pristionchus_pacificus_ 0
Onchocerca_volvulus_22 0
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   0
Caenorhabditis_japonica_ 0
Caenorhabditis_brenneri_ 0
Caenorhabditis_remanei_ 0
Caenorhabditis_elegans_76_235   (Roundworm)   1
Caenorhabditis_briggsae_2 0
Trichinella_spiralis_22 1
Echinococcus_multilocularis_ 0
Echinococcus_granulosus_ 0
Schistosoma_mansoni_ 0
Acropora_digitifera_v1.0 0
Nematostella_vectensis_1.0   (Starlet sea anemone)   1
Hydra_vulgaris 0
Trichoplax_adhaerens_ 2
Proterospongia_sp._ATCC_50818_ 3
Monosiga_brevicollis_ 2
Sphaeroforma_arctica_JP610_ 0
Capsaspora_owczarzaki_ATCC_30864_ 0
Mortierella_verticillata_NRRL_6337_ 0
Phycomyces_blakesleeanus_ 0
Rhizopus_oryzae_RA_99-880_ 0
Mucor_circinelloides_ 0
Malassezia_globosa_CBS_7966_ 0
Mixia_osmundae_IAM_14324_v1.0 0
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 0
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 0
Melampsora_laricis-populina_ 0
Rhodotorula_graminis_WP1_v1.0 0
Sporobolomyces_roseus_IAM_13481_ 0
Microbotryum_violaceum_22 0
Coniophora_puteana 0
Coprinopsis_cinerea_okayama7_130_v3 0
Pleurotus_ostreatus_   (Oyster mushroom)   0
Galerina_marginata_v1.0 0
Hebeloma_cylindrosporum_h7_v2.0 0
Agaricus_bisporus_var._bisporus_ 0
Stereum_hirsutum_FP-91666_SS1__v1.0 0
Heterobasidion_annosum_ 0
Gloeophyllum_trabeumv1.0 0
Punctularia_strigosozonata_v1.0 0
Fomitiporia_mediterranea_v1.0 0
Postia_placenta_ 0
Wolfiporia_cocos_MD-104_SS10__v1.0 0
Fomitopsis_pinicolav1.0 0
Fomitopsis_pinicola_FP-58527_SS1_v3.0 0
Tremella_mesenterica_   (Witches' butter)   0
Daldinia_eschscholzii_EC12_v1.0 0
Magnaporthe_poae_ATCC_64411_22 0
Magnaporthe_grisea_70-15_ 0
Podospora_anserina_ 0
Sporotrichum_thermophile_ATCC_42464_ 0
Thielavia_terrestris_NRRL_8126_ 0
Chaetomium_globosum_CBS_148.51_ 0
Neurospora_tetrasperma_ 0
Neurospora_discreta_FGSC_8579_ 0
Neurospora_crassa_OR74A_ 0
Cryphonectria_parasitica_   (Chestnut blight fungus)   0
Verticillium_albo-atrum_VaMs.102_ 0
Verticillium_dahliae_VdLs.17_ 0
Nectria_haematococca_mpVI_ 0
Fusarium_oxysporum_f._sp._lycopersici_4286_ 0
Fusarium_verticillioides_7600_ 1
Trichoderma_asperellum_CBS_433.97_v1.0 0
Trichoderma_citrinoviride_v1.0 0
Trichoderma_reesei_1.2 0
Trichoderma_virens_Gv29-8_ 0
Trichoderma_harzianum_CBS_226.95_v1.0 0
Amorphotheca_resinae_v1.0   (Creosote fungus)   0
Sclerotinia_sclerotiorum_ 1
Didymella_exigua_CBS_183.55_v1.0 0
Leptosphaeria_maculans_22 0
Setosphaeria_turcica_v1.0 0
Cochliobolus_miyabeanus_ATCC_44560_v1.0 0
Cochliobolus_victoriae_FI3_v1.0 0
Cochliobolus_carbonum_26-R-13_v1.0 0
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   0
Cochliobolus_lunatus_m118_v2.0 0
Pyrenophora_teres_f._teres_22 0
Pyrenophora_tritici-repentis_ 0
Mycosphaerella_graminicola_IPO323_ 0
Zasmidium_cellare_ATCC_36951_v1.0 0
Dothistroma_septosporum 0
Septoria_musiva_v1.0 0
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 0
Paracoccidioides_brasiliensis_Pb18_ 0
Coccidioides_posadasii_RMSCC_3488_ 0
Coccidioides_immitis_RS_ 0
Ajellomyces_dermatitidis_SLH14081_ 0
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 0
Microsporum_canis_CBS_113480_ 0
Trichophyton_equinum_CBS_127.97_ 0
Trichophyton_verrucosum_HKI_0517_ 1
Arthroderma_benhamiae_CBS_112371_ 0
Trichophyton_tonsurans_CBS_112818_ 0
Trichophyton_rubrum_CBS_118892_ 0
Penicillium_chrysogenum_Wisconsin_54-1255_ 0
Penicillium_chrysogenum_v1.0 0
Aspergillus_acidus_v1.0 0
Aspergillus_fumigatus_Af293 0
Aspergillus_brasiliensis_v1.0 0
Aspergillus_nidulans_FGSC_A4_ 0
Aspergillus_sydowii_v1.0 0
Aspergillus_versicolor_v1.0 0
Aspergillus_glaucus 0
Aspergillus_carbonarius_ITEM_5010_ 0
Neosartorya_fischeri_NRRL_181_ 0
Aspergillus_terreus_NIH2624_ 0
Aspergillus_tubingensis_v1.0 0
Aspergillus_wentii_v1.0 0
Aspergillus_oryzae_RIB40_ 0
Aspergillus_niger_22 0
Aspergillus_niger_ATCC_1015_ 0
Aspergillus_flavus_NRRL3357_ 0
Aspergillus_clavatus_NRRL_1_ 0
Penicillium_marneffei_ATCC_18224_ 0
Tuber_melanosporum_Mel28_22 0
Tuber_melanosporum_Vittad_   (Perigord truffle)   0
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1
Saccharomyces_mikatae_MIT 1
Saccharomyces_paradoxus_MIT 1
Saccharomyces_cerevisiae_76   (Baker's yeast)   1
Schizosaccharomyces_octosporus_yFS286_ 0
Allomyces_macrogynus_ATCC_38327_ 0
Spizellomyces_punctatus_DAOM_BR117_ 0
Selaginella_moellendorffii_ 2
Pinus_taeda   (Loblolly pine)   2
Picea_abies   (Norway spruce)   1
Eucalyptus_grandis_v201   (Rose gum)   1
Theobroma_cacao_B97-61/B2_v1   (Cacao)   0
Gossypium_raimondii_v221 2
Citrus_clementina_v165 2
Citrus_sinensis_v154   (Sweet orange)   3
Thellungiella_halophila_v173 0
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   0
Capsella_rubella_v183 0
Arabidopsis_lyrata_   (Lyrate rockcress)   0
Arabidopsis_thaliana_10   (Thale cress)   1
Carica_papaya_   (Papaya)   0
Medicago_truncatula_   (Barrel medic)   0
Phaseolus_vulgaris_v186   (French bean)   1
Glycine_max_v109   (Soybean)   2
Cucumis_sativus_v122   (Cucumber)   0
Fragaria_vesca_   (Wild strawberry)   0
Malus_domestica_v196   (Apple)   0
Prunus_persica_v139   (Peach)   1
Linum_usitatissimum_v200   (Flax)   1
Manihot_esculenta_v147   (Cassava)   1
Populus_trichocarpa_v156   (Black cottonwood)   1
Vitis_vinifera_   (Wine grape)   0
Mimulus_guttatus_v140   (Spotted monkey flower)   1
Solanum_lycopersicum_v.2.3   (Tomato)   0
Solanum_tuberosum_   (Potato)   0
Actinidia_chinensis_Hongyang_ 0
Aquilegia_coerulea_v195 1
Triticum_urartu_22 2
Aegilops_tauschii_22 1
Brachypodium_distachyon_   (Stiff brome)   4
Oryza_barthii_22   (African wild rice)   3
Oryza_meridionalis_22 3
Oryza_glumaepatula_22 4
Oryza_glaberrima   (African rice)   1
Oryza_punctata_22 2
Oryza_nivara_22 3
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   3
Oryza_sativa_v193   (Rice)   3
Panicum_virgatum_v202   (Switchgrass)   1
Setaria_italica_v164   (Foxtail millet)   1
Zea_mays_subsp._mays_   (Maize)   0
Zea_mays_v181   (Maize)   1
Sorghum_bicolor_   (Sorghum)   2
Musa_balbisiana   (Balbis banana)   3
Musa_acuminata_22   (Wild Malaysian banana)   2
Amborella_trichopoda_22 1
Physcomitrella_patens 3
Coccomyxa_subellipsoidea_sp._C-169_v2 2
Chlorella_vulgaris_ 2
Volvox_carteri_f._nagariensis_ 1
Volvox_carteri_v199 0
Chlamydomonas_reinhardtii_4.0 1
Ostreococcus_sp._RCC809_ 2
Micromonas_sp._RCC299_ 1
Cyanidioschyzon_merolae_strain_10D_22 1
Cyanidioschyzon_merolae 1
Porphyridium_purpureum_02_2012 1
Thecamonas_trahens_ATCC_50062_ 0
Bigelowiella_natans_CCMP2755_22 1
Leishmania_mexicana_2.4 2
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1
Trypanosoma_vivax_ 0
Trypanosoma_cruzi_strain_CL_Brener 0
Trypanosoma_congolense_2.4 2
Trypanosoma_brucei_gambiense_v4.1 2
Trypanosoma_brucei_TREU927_v4.1 2
Ectocarpus_siliculosus 1
Pythium_arrhenomanes_ATCC_12531_22 0
Pythium_vexans_DAOM_BR484_22 0
Phytophthora_ramorum_1.1   (Sudden oak death agent)   2
Phytophthora_infestans_T30-4_ 1
Phytophthora_capsici_ 0
Phaeodactylum_tricornutumCCAP_1055/1 1
Fragilariopsis_cylindrus 1
Thalassiosira_pseudonana_CCMP1335 0
Perkinsus_marinus_ATCC_50983_ 1
Paramecium_tetraurelia_ 1
Tetrahymena_thermophila_SB210_1_ 0
Babesia_bovis_T2Bo_ 0
Theileria_parva__ 1
Theileria_annulata 0
Plasmodium_falciparum_3D7_ 0
Plasmodium_vivax_SaI-1_7.0 0
Plasmodium_berghei_ANKA_ 0
Naegleria_gruberi_ 0
Guillardia_theta_CCMP2712_v1.0_ 2
Synechococcus_sp._PCC_7502 0
Gloeocapsa_sp._PCC_7428 1
Candidatus_Phytoplasma_mali 1
Aster_yellows_witches'-broom_phytoplasma_AYWB 1
Onion_yellows_phytoplasma_OY-M 1
Mycoplasma_conjunctivae_HRC/581 1
Mycoplasma_bovis_HB0801 1
Mycoplasma_fermentans_M64 1
Mycoplasma_hyorhinis_GDL-1 1
Rubrobacter_xylanophilus_DSM_9941 1
Ilumatobacter_coccineus 1
Acidimicrobium_ferrooxidans_DSM_10331 2
Nakamurella_multipartita_DSM_44233 1
Acidothermus_cellulolyticus_11B 2
Modestobacter_marinus 4
Blastococcus_saxobsidens_DD2 2
Kineococcus_radiotolerans_SRS30216 1
Catenulispora_acidiphila_DSM_44928 3
Stackebrandtia_nassauensis_DSM_44728 2
Frankia_symbiont_of_Datisca_glomerata 1
Frankia_sp._EAN1pec 1
Frankia_alni_ACN14a 1
Streptosporangium_roseum_DSM_43021 3
Streptomyces_coelicolor_A3(2) 2
Streptomyces_sp._PAMC26508 2
Streptomyces_flavogriseus_ATCC_33331 2
Streptomyces_sp._SirexAA-E 3
Streptomyces_griseus_subsp._griseus_NBRC_13350 2
Streptomyces_bingchenggensis_BCW-1 7
Streptomyces_violaceusniger_Tu_4113 8
Streptomyces_avermitilis_MA-4680 4
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 5
Streptomyces_scabiei_87.22 8
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 4
Saccharomonospora_viridis_DSM_43017 2
Pseudonocardia_dioxanivorans_CB1190 6
Saccharopolyspora_erythraea_NRRL_2338 3
Amycolatopsis_mediterranei_U32 6
Kribbella_flavida_DSM_17836 2
Nocardioides_sp._JS614 4
Microlunatus_phosphovorus_NM-1 1
Actinoplanes_sp._N902-109 2
Actinoplanes_sp._SE50/110 2
Actinoplanes_missouriensis_431 2
Tsukamurella_paurometabola_DSM_20162 2
Gordonia_sp._KTR9 5
Gordonia_polyisoprenivorans_VH2 3
Gordonia_bronchialis_DSM_43247 3
Rhodococcus_jostii_RHA1 11
Rhodococcus_equi_103S 2
Rhodococcus_opacus_B4 11
Rhodococcus_erythropolis_PR4 6
Nocardia_cyriacigeorgica_GUH-2 4
Nocardia_farcinica_IFM_10152 4
Amycolicicoccus_subflavus_DQS3-9A1 2
Mycobacterium_massiliense_str._GO_06 3
Mycobacterium_abscessus_ATCC_19977 3
Mycobacterium_sp._JLS 5
Mycobacterium_intracellulare_ATCC_13950 3
Mycobacterium_avium_104 2
Mycobacterium_vanbaalenii_PYR-1 4
Mycobacterium_canettii_CIPT_140010059 1
Mycobacterium_africanum_GM041182 1
Mycobacterium_tuberculosis_KZN_1435 1
Mycobacterium_tuberculosis 1
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 1
Mycobacterium_rhodesiae_NBB3 4
Mycobacterium_ulcerans_Agy99 0
Mycobacterium_gilvum_PYR-GCK 3
Mycobacterium_chubuense_NBB4 4
Mycobacterium_marinum_M 2
Mycobacterium_smegmatis_str._MC2_155 2
Corynebacterium_efficiens_YS-314 1
Corynebacterium_variabile_DSM_44702 2
Corynebacterium_glutamicum_R 1
Sanguibacter_keddieii_DSM_10542 1
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 1
Jonesia_denitrificans_DSM_20603 0
Intrasporangium_calvum_DSM_43043 3
Brachybacterium_faecium_DSM_4810 1
Isoptericola_variabilis_225 1
Xylanimonas_cellulosilytica_DSM_15894 2
Cellulomonas_flavigena_DSM_20109 1
[Cellvibrio]_gilvus_ATCC_13127 1
Arthrobacter_phenanthrenivorans_Sphe3 4
Arthrobacter_chlorophenolicus_A6 1
Arthrobacter_arilaitensis_Re117 1
Arthrobacter_sp._Rue61a 1
Arthrobacter_sp._FB24 2
Micrococcus_luteus_NCTC_2665 1
Arcanobacterium_haemolyticum_DSM_20595 0
Mobiluncus_curtisii_ATCC_43063 0
Thermomicrobium_roseum_DSM_5159 2
Sphaerobacter_thermophilus_DSM_20745 1
Truepera_radiovictrix_DSM_17093 1
Deinococcus_gobiensis_I-0 0
Deinococcus_maricopensis_DSM_21211 1
Oceanithermus_profundus_DSM_14977 1
Marinithermus_hydrothermalis_DSM_14884 1
Meiothermus_silvanus_DSM_9946 3
Meiothermus_ruber_DSM_1279 1
Thermus_sp._CCB_US3_UF1 1
Thermus_scotoductus_SA-01 1
Thermus_thermophilus_HB27 1
Anaerococcus_prevotii_DSM_20548 0
Megamonas_hypermegale 0
Erysipelothrix_rhusiopathiae_str._Fujisawa 0
Symbiobacterium_thermophilum_IAM_14863 0
Clostridiales_genomosp._BVAB3_str._UPII9-5 0
Sulfobacillus_acidophilus_DSM_10332 1
Thermincola_potens_JR 1
Pelotomaculum_thermopropionicum_SI 0
Desulfitobacterium_hafniense_Y51 0
Desulfotomaculum_reducens_MI-1 0
Acetobacterium_woodii_DSM_1030 0
Eubacterium_limosum_KIST612 0
Clostridium_difficile_630 0
Clostridium_sticklandii_DSM_519 1
Filifactor_alocis_ATCC_35896 0
Clostridium_phytofermentans_ISDg 0
Syntrophothermus_lipocalidus_DSM_12680 0
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 1
Clostridium_beijerinckii_NCIMB_8052 0
Clostridium_perfringens_ATCC_13124 0
Caldicellulosiruptor_obsidiansis_OB47 0
Caldicellulosiruptor_kronotskyensis_2002 0
Caldicellulosiruptor_bescii_DSM_6725 0
Tepidanaerobacter_acetatoxydans_Re1 0
Halothermothrix_orenii_H_168 1
Halanaerobium_hydrogeniformans 1
Halanaerobium_praevalens_DSM_2228 0
Carnobacterium_sp._17-4 1
Carnobacterium_sp._WN1359 1
Aerococcus_urinae_ACS-120-V-Col10a 2
Tetragenococcus_halophilus_NBRC_12172 1
Lactobacillus_sakei_subsp._sakei_23K 1
Lactococcus_garvieae_ATCC_49156 0
Lactococcus_lactis_subsp._cremoris_MG1363 0
Streptococcus_intermedius_JTH08 0
Streptococcus_gallolyticus_UCN34 0
Streptococcus_pasteurianus_ATCC_43144 0
Streptococcus_dysgalactiae_subsp._equisimilis_GGS_124 0
Streptococcus_infantarius_subsp._infantarius_CJ18 0
Streptococcus_macedonicus_ACA-DC_198 0
Streptococcus_uberis_0140J 1
Streptococcus_parauberis_KCTC_11537 0
Exiguobacterium_sp._MH3 0
Exiguobacterium_sibiricum_255-15 0
Bacillus_selenitireducens_MLS10 1
Listeria_innocua_Clip11262 1
Lysinibacillus_sphaericus_C3-41 0
Oceanobacillus_iheyensis_HTE831 1
Halobacillus_halophilus_DSM_2266 0
Bacillus_clausii_KSM-K16 1
Macrococcus_caseolyticus_JCSC5402 0
Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305 0
Staphylococcus_lugdunensis_HKU09-01 1
Melioribacter_roseus_P3M 1
Pelodictyon_phaeoclathratiforme_BU-1 2
Chlorobium_chlorochromatii_CaD3 2
Chlorobium_phaeobacteroides_DSM_266 2
Chlorobium_phaeovibrioides_DSM_265 2
Chlorobium_limicola_DSM_245 1
Chlorobaculum_parvum_NCIB_8327 2
Chlorobium_tepidum_TLS 2
Chloroherpeton_thalassium_ATCC_35110 1
Prosthecochloris_aestuarii_DSM_271 1
Rhodothermus_marinus_DSM_4252 0
Spirosoma_linguale_DSM_74 0
Runella_slithyformis_DSM_19594 1
Bacteroides_sp._CF50 0
Bacteroides_salanitronis_DSM_18170 0
Bacteroides_vulgatus_ATCC_8482 0
Cellulophaga_lytica_DSM_7489 1
Phycisphaera_mikurensis_NBRC_102666 1
Isosphaera_pallida_ATCC_43644 0
Coraliomargarita_akajimensis_DSM_45221 0
Thermanaerovibrio_acidaminovorans_DSM_6589 2
Spirochaeta_smaragdinae_DSM_11293 0
Sphaerochaeta_pleomorpha_str._Grapes 0
Sphaerochaeta_globus_str._Buddy 0
Spirochaeta_caldaria_DSM_7334 0
Treponema_denticola_ATCC_35405 0
Calditerrivibrio_nitroreducens_DSM_19672 1
Denitrovibrio_acetiphilus_DSM_12809 1
Flexistipes_sinusarabici_DSM_4947 0
Thermotoga_neapolitana_DSM_4359 1
Sulfurihydrogenibium_sp._YO3AOP1 1
Sulfurihydrogenibium_azorense_Az-Fu1 1
Hydrogenobacter_thermophilus_TK-6 3
Candidatus_Solibacter_usitatus_Ellin6076 2
Granulicella_mallensis_MP5ACTX8 0
Streptobacillus_moniliformis_DSM_12112 1
Sebaldella_termitidis_ATCC_33386 0
Leptotrichia_buccalis_C-1013-b 1
Ilyobacter_polytropus_DSM_2926 0
Arcobacter_sp._L 1
Syntrophus_aciditrophicus_SB 1
Desulfomonile_tiedjei_DSM_6799 1
Syntrophobacter_fumaroxidans_MPOB 0
Desulfobulbus_propionicus_DSM_2032 1
Desulfatibacillum_alkenivorans_AK-01 0
Desulfococcus_oleovorans_Hxd3 1
Desulfovibrio_salexigens_DSM_2638 0
Geobacter_sp._M21 1
Geobacter_bemidjiensis_Bem 1
Pelobacter_carbinolicus_DSM_2380 0
Dechloromonas_aromatica_RCB 1
Thauera_sp._MZ1T 1
Azoarcus_sp._KH32C 1
Azoarcus_sp._BH72 2
Dechlorosoma_suillum_PS 1
beta_proteobacterium_CB 1
Methylibium_petroleiphilum_PM1 3
Thiomonas_arsenitoxydans 3
Thiomonas_intermedia_K12 2
Rubrivivax_gelatinosus_IL144 2
Leptothrix_cholodnii_SP-6 2
Burkholderia_phytofirmans_PsJN 1
Burkholderia_phymatum_STM815 2
Burkholderia_xenovorans_LB400 6
Ralstonia_eutropha_JMP134 4
Cupriavidus_taiwanensis_LMG_19424 1
Cupriavidus_metallidurans_CH34 1
Cupriavidus_necator_N-1 3
Ralstonia_eutropha_H16 2
Ralstonia_pickettii_12D 1
Ralstonia_solanacearum_CFBP2957 2
Polynucleobacter_necessarius_subsp._asymbioticus_QLW-P1DMWA-1 1
Burkholderia_sp._RPE64 1
Burkholderia_thailandensis_E264 2
Burkholderia_pseudomallei_1106a 2
Burkholderia_mallei_SAVP1 2
Burkholderia_ambifaria_AMMD 3
Burkholderia_cenocepacia_HI2424 2
Burkholderia_multivorans_ATCC_17616 2
Burkholderia_vietnamiensis_G4 1
Burkholderia_gladioli_BSR3 3
Verminephrobacter_eiseniae_EF01-2 1
Ramlibacter_tataouinensis_TTB310 1
Delftia_sp._Cs1-4 1
Delftia_acidovorans_SPH-1 1
Polaromonas_sp._JS666 2
Polaromonas_naphthalenivorans_CJ2 1
Variovorax_paradoxus_S110 3
Rhodoferax_ferrireducens_T118 1
Comamonas_testosteroni_CNB-2 1
Collimonas_fungivorans_Ter331 1
Pusillimonas_sp._T7-7 1
Bordetella_petrii_DSM_12804 1
Bordetella_avium_197N 3
Bordetella_pertussis_Tohama_I 1
Bordetella_parapertussis_12822 1
Bordetella_bronchiseptica_RB50 2
Achromobacter_xylosoxidans_A8 3
Thiobacillus_denitrificans_ATCC_25259 1
Methylotenera_versatilis_301 1
Methylotenera_mobilis_JLW8 2
Methylovorus_sp._MP688 1
Methylovorus_glucosetrophus_SIP3-4 1
Methylobacillus_flagellatus_KT 1
Magnetococcus_marinus_MC-1 2
Asticcacaulis_excentricus_CB_48 1
Brevundimonas_subvibrioides_ATCC_15264 1
Caulobacter_sp._K31 2
Caulobacter_crescentus_NA1000 1
Caulobacter_segnis_ATCC_21756 1
Sphingopyxis_alaskensis_RB2256 1
Novosphingobium_aromaticivorans_DSM_12444 1
Sphingobium_sp._SYK-6 2
Sphingobium_japonicum_UT26S 1
Sphingobium_chlorophenolicum_L-1 2
Sphingomonas_sp._MM-1 1
Sphingomonas_wittichii_RW1 2
Hyphomonas_neptunium_ATCC_15444 2
Dinoroseobacter_shibae_DFL_12 2
Phaeobacter_gallaeciensis_2.10 1
Pseudovibrio_sp._FO-BEG1 1
Jannaschia_sp._CCS1 1
Ruegeria_sp._TM1040 1
Ruegeria_pomeroyi_DSS-3 2
Ketogulonicigenium_vulgare_Y25 1
Ketogulonigenium_vulgarum_WSH-001 1
Roseobacter_litoralis_Och_149 2
Roseobacter_denitrificans_OCh_114 1
Rhodobacter_sphaeroides_ATCC_17029 1
Paracoccus_denitrificans_PD1222 3
Tistrella_mobilis_KA081020-065 2
Magnetospirillum_magneticum_AMB-1 1
Rhodospirillum_rubrum_F11 0
Azospirillum_lipoferum_4B 1
Azospirillum_sp._B510 1
Gluconacetobacter_diazotrophicus_PAl_5 0
Acidiphilium_multivorum_AIU301 1
Polymorphum_gilvum_SL003B-26A1 5
Candidatus_Puniceispirillum_marinum_IMCC1322 1
Starkeya_novella_DSM_506 3
Xanthobacter_autotrophicus_Py2 3
Methylobacterium_chloromethanicum_CM4 1
Methylobacterium_extorquens_AM1 1
Methylobacterium_sp._4-46 2
Methylobacterium_populi_BJ001 1
Methylobacterium_nodulans_ORS_2060 3
Methylobacterium_radiotolerans_JCM_2831 2
Parvibaculum_lavamentivorans_DS-1 1
Sinorhizobium_fredii_NGR234 4
Sinorhizobium_medicae_WSM419 2
Sinorhizobium_meliloti_AK83 4
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 1
Rhizobium_etli_CIAT_652 1
Rhizobium_leguminosarum_bv._viciae_3841 1
Agrobacterium_tumefaciens_str._C58 1
Agrobacterium_radiobacter_K84 1
Agrobacterium_sp._H13-3 1
Agrobacterium_vitis_S4 2
Mesorhizobium_opportunistum_WSM2075 1
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 1
Mesorhizobium_loti_MAFF303099 2
Methylocella_silvestris_BL2 2
Beijerinckia_indica_subsp._indica_ATCC_9039 1
Hyphomicrobium_sp._MC1 1
Hyphomicrobium_denitrificans_ATCC_51888 1
Oligotropha_carboxidovorans_OM4 0
Rhodopseudomonas_palustris_BisA53 3
Nitrobacter_winogradskyi_Nb-255 0
Nitrobacter_hamburgensis_X14 0
Bradyrhizobium_japonicum_USDA_110 1
Bradyrhizobium_sp._ORS_278 1
Methylocystis_sp._SC2 0
Aggregatibacter_actinomycetemcomitans_D7S-1 1
Tolumonas_auensis_DSM_9187 0
Aeromonas_veronii_B565 0
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 0
Vibrio_sp._Ex25 0
Vibrio_harveyi_ATCC_BAA-1116 0
Vibrio_parahaemolyticus_RIMD_2210633 0
Vibrio_splendidus_LGP32 1
Photobacterium_profundum_SS9 0
Psychromonas_ingrahamii_37 0
Shewanella_loihica_PV-4 0
Shewanella_sediminis_HAW-EB3 0
Shewanella_frigidimarina_NCIMB_400 0
Glaciecola_sp._4H-3-7+YE-5 2
Marinobacter_aquaeolei_VT8 1
Alteromonas_macleodii_str._'Deep_ecotype' 0
Alcanivorax_borkumensis_SK2 1
Marinomonas_mediterranea_MMB-1 1
Chromohalobacter_salexigens_DSM_3043 1
Methylomicrobium_alcaliphilum 0
Methylomonas_methanica_MC09 1
Methylococcus_capsulatus_str._Bath 1
Pseudoxanthomonas_spadix_BD-a59 1
Halothiobacillus_neapolitanus_c2 1
Alkalilimnicola_ehrlichii_MLHE-1 1
Thioalkalivibrio_sulfidophilus_HL-EbGr7 4
Thioalkalivibrio_sp._K90mix 1
Halorhodospira_halophila_SL1 3
Allochromatium_vinosum_DSM_180 1
Thiocystis_violascens_DSM_198 4
gamma_proteobacterium_HdN1 2
Providencia_stuartii_MRSN_2154 1
Serratia_sp._AS12 1
Serratia_plymuthica_AS9 1
Serratia_proteamaculans_568 1
Dickeya_dadantii_Ech703 0
Pantoea_sp._At-9b 0
Escherichia_blattae_DSM_4481 1
Enterobacteriaceae_bacterium_strain_FGI_57 1
Enterobacter_aerogenes_KCTC_2190 1
Pseudomonas_sp._UW4 0
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 0
Pseudomonas_entomophila_L48 0
Pseudomonas_putida_F1 1
Pseudomonas_sp._VLB120 0
Psychrobacter_sp._G 0
Psychrobacter_sp._PRwf-1 1
Psychrobacter_cryohalolentis_K5 0
Acinetobacter_oleivorans_DR1 1
Acinetobacter_calcoaceticus_PHEA-2 2
Acinetobacter_sp._ADP1 1
Methylophaga_sp._JAM1 1
Thioalkalimicrobium_cyclicum_ALM1 1
Metallosphaera_cuprina_Ar-4 1
Metallosphaera_sedula_DSM_5348 1
Sulfolobus_tokodaii_str._7 2
Sulfolobus_islandicus_Y.N.15.51 3
Sulfolobus_solfataricus_P2 1
Sulfolobus_acidocaldarius_DSM_639 2
Methanocella_arvoryzae_MRE50 1
Methanocella_conradii_HZ254 1
Methanocella_paludicola_SANAE 1
Methanosaeta_concilii_GP6 1
Methanohalobium_evestigatum_Z-7303 1
Methanococcoides_burtonii_DSM_6242 1
Methanosarcina_acetivorans_C2A 1
Methanosarcina_mazei_Go1 1
Methanosarcina_barkeri_str._Fusaro 2
Methanopyrus_kandleri_AV19 1
Thermococcus_sp._4557 1
Thermococcus_onnurineus_NA1 2
Thermococcus_kodakarensis_KOD1 1
Thermococcus_gammatolerans_EJ3 1
Thermococcus_sibiricus_MM_739 1
Thermococcus_barophilus_MP 2
Pyrococcus_sp._ST04 2
Pyrococcus_yayanosii_CH1 1
Pyrococcus_horikoshii_OT3 1
Pyrococcus_abyssi_GE5 1
Pyrococcus_furiosus_COM1 1
Thermoplasmatales_archaeon_BRNA1 1
Thermoplasma_volcanium_GSS1 1
Picrophilus_torridus_DSM_9790 2
Salinarchaeum_sp._Harcht-Bsk1 1
Halopiger_xanaduensis_SH-6 1
Haloterrigena_turkmenica_DSM_5511 1
Natrialba_magadii_ATCC_43099 1
Methanotorris_igneus_Kol_5 1
Methanothermococcus_okinawensis_IH1 1
Methanococcus_voltae_A3 1
Methanococcus_vannielii_SB 1
Methanothermobacter_marburgensis_str._Marburg 1
Methanothermobacter_thermautotrophicus_str._Delta_H 1
Methanobrevibacter_sp._AbM4 2
Methanobrevibacter_smithii_ATCC_35061 1
Aciduliprofundum_sp._MAR08-339 1
Acholeplasma_laidlawii_PG-8A 0

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   0
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   0
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   0
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   0
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   0
Paracoccidioides_brasiliensis_Pb01_ 0
Paracoccidioides_brasiliensis_Pb03_ 0
Coccidioides_posadasii_str._Silveira_ 0
Coccidioides_immitis_RMSCC_3703_ 0
Coccidioides_immitis_RMSCC_2394_ 0
Coccidioides_immitis_H538.4_ 0
Ajellomyces_dermatitidis_ER-3_ 0
Histoplasma_capsulatum_H143 0
Histoplasma_capsulatum_H88 0
Histoplasma_capsulatum_G186AR 0
Aspergillus_fumigatus_A1163_ 0
Saccharomyces_cerevisiae_UC5 1
Saccharomyces_cerevisiae_PW5 1
Saccharomyces_cerevisiae_T7 1
Saccharomyces_cerevisiae_FostersB 1
Saccharomyces_cerevisiae_FostersO 1
Saccharomyces_cerevisiae_VL3 1
Saccharomyces_cerevisiae_LalvinQA23 1
Saccharomyces_cerevisiae_Sigma1278b 1
Saccharomyces_cerevisiae_W303 1
Saccharomyces_cerevisiae_JAY291 1
Saccharomyces_cerevisiae_YJM789_ 1
Saccharomyces_cerevisiae_YJM789 1
Saccharomyces_cerevisiae_RM11-1a 1
Saccharomyces_cerevisiae_RM11-1a_ 1
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   1
Batrachochytrium_dendrobatidis_JAM81_ 0
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   0
Hordeum_vulgare_22   (Domesticated barley)   1
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   4
Trypanosoma_brucei_Lister_427_v4.1 1
Plasmodium_falciparum_HB3_ 0
Plasmodium_falciparum_Dd2_ 0
Chamaesiphon_minutus_PCC_6605 0
Cyanothece_sp._ATCC_51142 1
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 0
Candidatus_Phytoplasma_solani_tobfin_28409 1
Candidatus_Phytoplasma_australiense_Strawberry_lethal_yellows_phytoplasma_(CPA)_str._NZSb11 1
Candidatus_Phytoplasma_australiense 1
Spiroplasma_chrysopicola_DF-1 0
Mycoplasma_bovis_Hubei-1 1
Mycoplasma_bovis_PG45 1
Mycoplasma_fermentans_JER 1
Mycoplasma_fermentans_PG18 1
Mycoplasma_hyorhinis_SK76 1
Mycoplasma_hyorhinis_MCLD 1
Mycoplasma_hyorhinis_HUB-1 1
Mycoplasma_hyorhinis_DBS_1050 1
Frankia_sp._EuI1c 3
Frankia_sp._CcI3 1
Nocardiopsis_alba_ATCC_BAA-2165 1
Streptomyces_albus_J1074 2
Streptomyces_rapamycinicus_NRRL_5491 5
Streptomyces_davawensis_JCM_4913 3
Streptomyces_fulvissimus_DSM_40593 2
Streptomyces_venezuelae_ATCC_10712 2
Streptomyces_collinus_Tu_365 3
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 5
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 4
Saccharothrix_espanaensis_DSM_44229 1
Amycolatopsis_mediterranei_RB 6
Amycolatopsis_mediterranei_S699 6
Amycolatopsis_mediterranei_S699 6
Amycolatopsis_orientalis_HCCB10007 5
Propionibacterium_acnes_C1 1
Actinoplanes_friuliensis_DSM_7358 1
Rhodococcus_pyridinivorans_SB3094 3
Rhodococcus_erythropolis_CCM2595 3
Nocardia_brasiliensis_ATCC_700358 3
Mycobacterium_sp._MOTT36Y 2
Mycobacterium_sp._JDM601 2
Mycobacterium_abscessus_subsp._bolletii_50594 1
Mycobacterium_liflandii_128FXT 1
Mycobacterium_sp._KMS 4
Mycobacterium_sp._MCS 4
Mycobacterium_yongonense_05-1390 2
Mycobacterium_intracellulare_MOTT-64 2
Mycobacterium_indicus_pranii_MTCC_9506 2
Mycobacterium_intracellulare_MOTT-02 3
Mycobacterium_avium_subsp._paratuberculosis_MAP4 2
Mycobacterium_avium_subsp._paratuberculosis_K-10 2
Mycobacterium_canettii_CIPT_140070017 1
Mycobacterium_canettii_CIPT_140060008 1
Mycobacterium_canettii_CIPT_140070008 1
Mycobacterium_canettii_CIPT_140070010 2
Mycobacterium_tuberculosis_EAI5/NITR206 1
Mycobacterium_tuberculosis_EAI5 1
Mycobacterium_tuberculosis_CAS/NITR204 2
Mycobacterium_tuberculosis_str._Beijing/NITR203 1
Mycobacterium_tuberculosis_UT205 1
Mycobacterium_tuberculosis_RGTB423 1
Mycobacterium_tuberculosis_RGTB327 1
Mycobacterium_tuberculosis_CTRI-2 1
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 1
Mycobacterium_tuberculosis_KZN_605 1
Mycobacterium_tuberculosis_KZN_4207 1
Mycobacterium_tuberculosis_CCDC5180 1
Mycobacterium_tuberculosis_CCDC5079 1
Mycobacterium_tuberculosis_CCDC5079 1
Mycobacterium_tuberculosis_H37Ra 1
Mycobacterium_tuberculosis_str._Haarlem 1
Mycobacterium_tuberculosis_F11 1
Mycobacterium_tuberculosis_H37Rv 1
Mycobacterium_tuberculosis_CDC1551 1
Mycobacterium_bovis_AF2122/97 1
Mycobacterium_bovis_BCG_str._Korea_1168P 1
Mycobacterium_bovis_BCG_str._Mexico 1
Mycobacterium_bovis_BCG_str._Tokyo_172 1
Mycobacterium_gilvum_Spyr1 2
Mycobacterium_smegmatis_str._MC2_155 2
Mycobacterium_kansasii_ATCC_12478 4
Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 2
Corynebacterium_glutamicum_MB001 1
Corynebacterium_glutamicum_SCgG2 3
Corynebacterium_glutamicum_SCgG1 3
Corynebacterium_glutamicum_ATCC_13032 1
Corynebacterium_glutamicum_ATCC_13032 1
Corynebacterium_glutamicum_ATCC_13032 1
Corynebacterium_diphtheriae_HC03 1
Thermus_oshimai_JL-2 1
Thermus_thermophilus_JL-18 2
Thermus_thermophilus_SG0.5JP17-16 1
Thermus_thermophilus_HB8 1
Erysipelothrix_rhusiopathiae_SY1027 0
Sulfobacillus_acidophilus_TPY 1
Desulfitobacterium_dichloroeliminans_LMG_P-21439 0
Clostridium_difficile_BI1 0
Clostridium_difficile_R20291 0
Clostridium_difficile_CD196 0
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 0
Clostridium_perfringens_SM101 0
Clostridium_perfringens_str._13 0
Clostridium_pasteurianum_BC1 0
Halobacteroides_halobius_DSM_5150 1
Carnobacterium_maltaromaticum_LMA28 0
Enterococcus_casseliflavus_EC20 0
Enterococcus_faecalis_OG1RF 1
Lactobacillus_casei_LOCK919 0
Lactobacillus_casei_str._Zhang 0
Lactobacillus_rhamnosus_LOCK900 0
Lactobacillus_rhamnosus_GG 0
Lactobacillus_rhamnosus_GG 0
Lactobacillus_fermentum_CECT_5716 1
Lactobacillus_plantarum_ZJ316 0
Lactobacillus_plantarum_subsp._plantarum_ST-III 0
Lactobacillus_plantarum_subsp._plantarum_P-8 0
Lactobacillus_plantarum_WCFS1 0
Lactococcus_garvieae_Lg2 0
Lactococcus_lactis_subsp._lactis_KLDS_4.0325 0
Lactococcus_lactis_subsp._lactis_IO-1 0
Lactococcus_lactis_subsp._lactis_CV56 1
Lactococcus_lactis_subsp._lactis_KF147 0
Lactococcus_lactis_subsp._lactis_Il1403 0
Lactococcus_lactis_subsp._cremoris_KW2 0
Lactococcus_lactis_subsp._cremoris_UC509.9 0
Lactococcus_lactis_subsp._cremoris_A76 0
Lactococcus_lactis_subsp._cremoris_NZ9000 0
Lactococcus_lactis_subsp._cremoris_SK11 0
Streptococcus_intermedius_C270 0
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_BAA-2069 0
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_43143 0
Streptococcus_dysgalactiae_subsp._equisimilis_167 0
Streptococcus_dysgalactiae_subsp._equisimilis_AC-2713 0
Streptococcus_dysgalactiae_subsp._equisimilis_ATCC_12394 0
Streptococcus_dysgalactiae_subsp._equisimilis_RE378 0
Streptococcus_oligofermentans_AS_1.3089 0
Streptococcus_iniae_SF1 0
Exiguobacterium_antarcticum_B7 0
Paenibacillus_sp._Y412MC10 0
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 1
Listeria_monocytogenes_08-5578 1
Amphibacillus_xylanus_NBRC_15112 0
Bacillus_cereus_Q1 1
Staphylococcus_pasteuri_SP1 1
Staphylococcus_lugdunensis_N920143 1
Staphylococcus_aureus_subsp._aureus_11819-97 1
Chlorobium_phaeobacteroides_BS1 1
Rhodothermus_marinus_SG0.5JP17-172 0
Emticicia_oligotrophica_DSM_17448 1
Hydrogenobacter_thermophilus_TK-6 3
Desulfovibrio_vulgaris_str._'Miyazaki_F' 1
Geobacter_sp._M18 0
Burkholderia_phenoliruptrix_BR3459a 2
Pandoraea_pnomenusa_3kgm 2
Ralstonia_pickettii_12J 1
Ralstonia_solanacearum_FQY_4 1
Ralstonia_solanacearum_Po82 2
Ralstonia_solanacearum_PSI07 2
Ralstonia_solanacearum_CMR15 1
Ralstonia_solanacearum_GMI1000 1
Burkholderia_sp._YI23 3
Burkholderia_sp._CCGE1003 1
Burkholderia_sp._CCGE1001 2
Burkholderia_sp._KJ006 1
Burkholderia_thailandensis_MSMB121 2
Burkholderia_pseudomallei_MSHR305 2
Burkholderia_pseudomallei_NCTC_13179 2
Burkholderia_pseudomallei_BPC006 2
Burkholderia_pseudomallei_1026b 2
Burkholderia_pseudomallei_668 2
Burkholderia_pseudomallei_1710b 2
Burkholderia_pseudomallei_K96243 2
Burkholderia_mallei_NCTC_10229 2
Burkholderia_mallei_NCTC_10247 2
Burkholderia_mallei_ATCC_23344 2
Burkholderia_lata 2
Burkholderia_ambifaria_MC40-6 2
Burkholderia_cenocepacia_MC0-3 3
Burkholderia_cenocepacia_AU_1054 2
Burkholderia_cenocepacia_J2315 2
Burkholderia_multivorans_ATCC_17616 2
Burkholderia_cepacia_GG4 2
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 0
Variovorax_paradoxus_B4 3
Variovorax_paradoxus_EPS 1
Bordetella_pertussis_CS 1
Bordetella_parapertussis_18323 1
Bordetella_bronchiseptica_MO149 1
Bordetella_bronchiseptica_253 1
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 1
Sulfuricella_denitrificans_skB26 1
Caulobacter_crescentus_CB15 1
Phaeobacter_gallaeciensis_DSM_17395 1
Phaeobacter_gallaeciensis_DSM_26640 2
Leisingera_methylohalidivorans_DSM_14336 1
Octadecabacter_antarcticus_307 1
Octadecabacter_arcticus_238 1
Rhodobacter_sphaeroides_KD131 1
Rhodobacter_sphaeroides_ATCC_17025 2
Rhodobacter_sphaeroides_2.4.1 1
Paracoccus_aminophilus_JCM_7686 1
Magnetospirillum_gryphiswaldense_MSR-1_v2 2
Rhodospirillum_rubrum_ATCC_11170 0
Gluconacetobacter_diazotrophicus_PAl_5 0
Gluconobacter_oxydans_H24 0
Methylobacterium_extorquens_DM4 1
Methylobacterium_extorquens_PA1 1
Sinorhizobium_fredii_USDA_257 3
Sinorhizobium_fredii_HH103 3
Sinorhizobium_meliloti_2011 3
Sinorhizobium_meliloti_GR4 3
Sinorhizobium_meliloti_Rm41 4
Sinorhizobium_meliloti_SM11 4
Sinorhizobium_meliloti_BL225C 4
Sinorhizobium_meliloti_1021 4
Rhizobium_etli_CFN_42 1
Rhizobium_etli_bv._mimosae_str._Mim1 1
Rhizobium_tropici_CIAT_899 1
Rhizobium_leguminosarum_bv._trifolii_WSM2304 1
Rhizobium_leguminosarum_bv._trifolii_WSM1325 1
Mesorhizobium_australicum_WSM2073 1
Hyphomicrobium_nitrativorans_NL23 1
Hyphomicrobium_denitrificans_1NES1 2
Oligotropha_carboxidovorans_OM5 0
Oligotropha_carboxidovorans_OM5 0
Rhodopseudomonas_palustris_DX-1 2
Rhodopseudomonas_palustris_TIE-1 3
Rhodopseudomonas_palustris_HaA2 2
Rhodopseudomonas_palustris_BisB5 2
Rhodopseudomonas_palustris_CGA009 2
Bradyrhizobium_sp._S23321 1
Bradyrhizobium_sp._BTAi1 1
Bradyrhizobium_oligotrophicum_S58 1
Bradyrhizobium_japonicum_USDA_6 2
Aeromonas_hydrophila_ML09-119 0
Vibrio_parahaemolyticus_BB22OP 0
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 0
Vibrio_vulnificus_CMCP6 0
Vibrio_vulnificus_YJ016 0
Glaciecola_psychrophila_170 1
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 0
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 0
Alteromonas_macleodii_AltDE1 0
Alcanivorax_dieselolei_B5 1
Xanthomonas_campestris_pv._vesicatoria_str._85-10 1
Xanthomonas_axonopodis_pv._citrumelo_F1 1
Thioalkalivibrio_nitratireducens_DSM_14787 5
Thioflavicoccus_mobilis_8321 1
Serratia_sp._AS13 1
Serratia_plymuthica_S13 1
Serratia_plymuthica_4Rx13 1
Serratia_marcescens_FGI94 1
Serratia_marcescens_WW4 1
Serratia_liquefaciens_ATCC_27592 1
Dickeya_dadantii_3937 0
Raoultella_ornithinolytica_B6 1
Enterobacter_aerogenes_EA1509E 1
Pseudomonas_denitrificans_ATCC_13867 1
Pseudomonas_syringae_pv._phaseolicola_1448A 1
Pseudomonas_monteilii_SB3101 1
Pseudomonas_monteilii_SB3078 1
Pseudomonas_putida_HB3267 0
Pseudomonas_putida_NBRC_14164 0
Pseudomonas_putida_DOT-T1E 1
Pseudomonas_putida_S16 0
Pseudomonas_putida_BIRD-1 0
Pseudomonas_putida_W619 0
Pseudomonas_putida_ND6 0
Pseudomonas_putida_KT2440 0
Pseudomonas_putida_GB-1 0
Pseudomonas_poae_RE*1-1-14 0
Pseudomonas_fluorescens_F113 1
Pseudomonas_fluorescens_Pf0-1 0
Acinetobacter_genomosp._13TU__RUH2624 1
Acinetobacter_sp.__SH024 1
Acinetobacter_calcoaceticus_ruh2202 1
Acinetobacter_baumannii_ZW85-1 1
Acinetobacter_baumannii_TYTH-1 1
Acinetobacter_baumannii_BJAB0868 1
Acinetobacter_baumannii_BJAB0715 1
Acinetobacter_baumannii_BJAB07104 1
Acinetobacter_baumannii_TCDC-AB0715 1
Acinetobacter_baumannii_D1279779 1
Acinetobacter_baumannii_MDR-TJ 1
Acinetobacter_baumannii_1656-2 1
Acinetobacter_baumannii__ATCC_19606 1
Acinetobacter_baumannii_AB307-0294 1
Acinetobacter_baumannii_AYE 1
Acinetobacter_baumannii_MDR-ZJ06 1
Acinetobacter_baumannii_AB0057 1
Acinetobacter_baumannii_ACICU 1
Acinetobacter_radioresistens__SH164 1
Methylophaga_sp._JAM7 1
Sulfolobus_islandicus_LAL14/1 2
Sulfolobus_islandicus_REY15A 3
Sulfolobus_islandicus_HVE10/4 3
Sulfolobus_islandicus_Y.G.57.14 2
Sulfolobus_islandicus_L.S.2.15 2
Sulfolobus_islandicus_M.16.27 2
Sulfolobus_islandicus_M.14.25 2
Sulfolobus_islandicus_M.16.4 3
Sulfolobus_islandicus_L.D.8.5 3
Sulfolobus_solfataricus_98/2 1
Sulfolobus_acidocaldarius_SUSAZ 1
Sulfolobus_acidocaldarius_Ron12/I 2
Sulfolobus_acidocaldarius_N8 2
Methanomethylovorans_hollandica_DSM_15978 1
Methanolobus_psychrophilus_R15 1
Thermococcus_sp._AM4 1
Thermococcus_sp._CL1 1
Thermococcus_litoralis_DSM_5473 1
Pyrococcus_sp._NA2 1
Pyrococcus_furiosus_DSM_3638 1
Candidatus_Methanomethylophilus_alvus_Mx1201 1
Candidatus_Methanomassiliicoccus_intestinalis_Issoire-Mx1 1
Halovivax_ruber_XH-70 1
Natronobacterium_gregoryi_SP2 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   0
Pan_troglodytes_69_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_69_3.1   (Western gorilla)   0
Pongo_abelii_69_2   (Sumatran orangutan)   0
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   0
Macaca_mulatta_69_1   (Rhesus monkey)   0
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   0
Otolemur_garnettii_69_3   (Small-eared galago)   1
Microcebus_murinus_69_1   (Gray mouse lemur)   0
Rattus_norvegicus_69_3.4   (Norway rat)   0
Mus_musculus_69_38   (House mouse)   0
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   2
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   0
Cavia_porcellus_69_3   (Domestic guinea pig)   1
Oryctolagus_cuniculus_69_2   (Rabbit)   0
Tupaia_belangeri_69   (Northern tree shrew)   0
Sus_scrofa_69_10.2   (Pig)   0
Bos_taurus_69_3.1   (Cattle)   0
Vicugna_pacos_69_1   (Alpaca)   1
Tursiops_truncatus_69_1   (Bottlenose dolphin)   1
Mustela_putorius_furo_69_1.0   (Domestic ferret)   1
Ailuropoda_melanoleuca_69_1   (Giant panda)   0
Canis_familiaris_69_3.1   (Dog)   0
Felis_catus_69   (Domestic cat)   1
Equus_caballus_69_2   (Horse)   0
Myotis_lucifugus_69_2.0   (Little brown bat)   0
Pteropus_vampyrus_69_1   (Large flying fox)   0
Procavia_capensis_69_1   (Cape rock hyrax)   0
Loxodonta_africana_69_3   (African savanna elephant)   0
Echinops_telfairi_69   (Small Madagascar hedgehog)   0
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   1
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   1
Macropus_eugenii_69_1.0   (Tammar wallaby)   1
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   0
Ornithorhynchus_anatinus_69_5   (Platypus)   1
Meleagris_gallopavo_69_2   (Turkey)   1
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   2
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   0
Anolis_carolinensis_69_2.0   (Green anole)   0
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   1
Latimeria_chalumnae_69_1   (Coelacanth)   0
Gadus_morhua_69_1   (Atlantic cod)   0
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   0
Takifugu_rubripes_69_4   (Torafugu)   0
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   0
Oryzias_latipes_69_1   (Japanese medaka)   0
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   0
Oreochromis_niloticus_69_1.0   (Nile tilapia)   0
Danio_rerio_69_9   (Zebrafish)   0
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   0
Ciona_intestinalis_69   (Vase tunicate)   1
Drosophila_melanogaster_69_5   (Fruit fly)   0
Caenorhabditis_elegans_69_215   (Roundworm)   0
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   1
Arabidopsis_thaliana_10   (Thale cress)   1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   2
Homo_sapiens__(NCBI_version)   (Human)   2
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   0
Loa_loa_v3.3_(Request)   (Eye worm)   0
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   0
Picea_sitchensis__(Incomplete)   (Sitka spruce)   1
Malus_x_domestica_(Duplicate)   (Apple)   0
Nicotiana_benthamiana_0.4.4_(Early_draft) 1
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   0
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   0
Phoenix_dactylifera__(Early_draft)   (Date palm)   0
Acholeplasma_laidlawii_PG-8A_(duplicate) 0
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 1
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 0
NCBI_plasmid_sequences_(Plasmids) 75
Protozoadb_2010_08_(Protozoadb) 3
PDB_chains_(SCOP_1.75)_(PDB) 5
TargetDB__(Targets) 11
Protein_Data_Bank_(all_PDB_sequenc) 64
STRING_v9.0.5_(STRING) 440
Uniprot_2018_03_genome 52655
NCBI_2017_08_genome 31128

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]