SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 52058,52058,52058,52058,57196,57196,57196,57196,57196,49899,57196,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52058 - L domain-like
52058 - L domain-like
52058 - L domain-like
52058 - L domain-like
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
57196 - EGF/Laminin
49899 - Concanavalin A-like lectins/glucanases
57196 - EGF/Laminin

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Cavia_porcellus_76_3   (Domestic guinea pig)   1
Ochotona_princeps_76   (American pika)   1
Bos_taurus_76_3.1   (Cattle)   1
Echinops_telfairi_76   (Small Madagascar hedgehog)   1
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   1

Longest transcript per gene
Genome     Number
Cavia_porcellus_69_3   (Domestic guinea pig)   1
Ochotona_princeps_69   (American pika)   1
Bos_taurus_69_3.1   (Cattle)   1
Echinops_telfairi_69   (Small Madagascar hedgehog)   1
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   1

Others
Genome     Number
STRING_v9.0.5_(STRING) 2
NCBI_2017_08_genome 4
Uniprot_2018_03_genome 671

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