SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 52218,54862 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52218 - Flavoproteins
54862 - 4Fe-4S ferredoxins

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Cryptobacterium_curtum_DSM_15641 1
Eggerthella_sp._YY7918 3
Eggerthella_lenta_DSM_2243 2
Megasphaera_elsdenii_DSM_20460 2
Acidaminococcus_intestini_RyC-MR95 2
Acidaminococcus_fermentans_DSM_20731 2
Megamonas_hypermegale 1
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 1
Clostridium_clariflavum_DSM_19732 1
Clostridium_cellulolyticum_H10 2
Clostridium_thermocellum_ATCC_27405 1
Faecalibacterium_prausnitzii 1
Ruminococcus_albus_7 1
Oscillibacter_valericigenes_Sjm18-20 3
butyrate-producing_bacterium_SS3/4 2
butyrate-producing_bacterium_SM4/1 2
Desulfosporosinus_acidiphilus_SJ4 4
Desulfosporosinus_orientis_DSM_765 7
Syntrophobotulus_glycolicus_DSM_8271 1
Desulfotomaculum_reducens_MI-1 1
Desulfotomaculum_acetoxidans_DSM_771 2
Desulfotomaculum_ruminis_DSM_2154 1
Acetobacterium_woodii_DSM_1030 8
Eubacterium_limosum_KIST612 3
Clostridium_difficile_630 3
Filifactor_alocis_ATCC_35896 1
Clostridium_phytofermentans_ISDg 1
Clostridium_lentocellum_DSM_5427 2
[Ruminococcus]_obeum 1
[Ruminococcus]_torques 1
Roseburia_intestinalis 1
Butyrivibrio_proteoclasticus_B316 1
Alkaliphilus_metalliredigens_QYMF 1
Clostridium_sp._BNL1100 1
Clostridium_ljungdahlii_DSM_13528 1
Clostridium_kluyveri_DSM_555 6
Clostridium_beijerinckii_NCIMB_8052 6
Clostridium_tetani_E88 1
Clostridium_perfringens_ATCC_13124 1
Clostridium_cellulovorans_743B 1
Clostridium_botulinum_A_str._ATCC_3502 2
Clostridium_acetobutylicum_ATCC_824 1
Tepidanaerobacter_acetatoxydans_Re1 2
Parabacteroides_distasonis_ATCC_8503 2
Odoribacter_splanchnicus_DSM_20712 2
Bacteroides_sp._CF50 1
Prevotella_melaninogenica_ATCC_25845 1
Prevotella_intermedia_17 1
Prevotella_denticola_F0289 1
Prevotella_ruminicola_23 2
Alistipes_finegoldii_DSM_17242 1
Bacteroides_salanitronis_DSM_18170 3
Bacteroides_helcogenes_P_36-108 2
Bacteroides_vulgatus_ATCC_8482 2
Bacteroides_thetaiotaomicron_VPI-5482 2
Bacteroides_fragilis_YCH46 2
Thermovirga_lienii_DSM_17291 1
Brachyspira_murdochii_DSM_12563 3
Brachyspira_intermedia_PWS/A 3
Brachyspira_pilosicoli_95/1000 2
Brachyspira_hyodysenteriae_WA1 3
Spirochaeta_smaragdinae_DSM_11293 2
Sphaerochaeta_pleomorpha_str._Grapes 2
Sphaerochaeta_globus_str._Buddy 1
Treponema_azotonutricium_ZAS-9 1
Treponema_primitia_ZAS-2 2
Treponema_denticola_ATCC_35405 1
Denitrovibrio_acetiphilus_DSM_12809 1
Elusimicrobium_minutum_Pei191 3
Sebaldella_termitidis_ATCC_33386 3
Ilyobacter_polytropus_DSM_2926 2
Sulfurospirillum_deleyianum_DSM_6946 1
Desulfobacca_acetoxidans_DSM_11109 1
Desulfotalea_psychrophila_LSv54 1
Desulfobulbus_propionicus_DSM_2032 2
Desulfatibacillum_alkenivorans_AK-01 5
Desulfobacterium_autotrophicum_HRM2 1
Desulfococcus_oleovorans_Hxd3 1
Desulfohalobium_retbaense_DSM_5692 1
Desulfomicrobium_baculatum_DSM_4028 1
Desulfovibrio_aespoeensis_Aspo-2 1
Desulfovibrio_alaskensis_G20 1
Desulfovibrio_salexigens_DSM_2638 2
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 1
Desulfovibrio_africanus_str._Walvis_Bay 2
Geobacter_sp._M21 1
Geobacter_uraniireducens_Rf4 2
Geobacter_lovleyi_SZ 1
Geobacter_sulfurreducens_KN400 1
Geobacter_metallireducens_GS-15 1
Pelobacter_propionicus_DSM_2379 1
Pelobacter_carbinolicus_DSM_2380 1
Methanocella_arvoryzae_MRE50 2
Methanocella_conradii_HZ254 1
Methanocella_paludicola_SANAE 2
Methanosarcina_acetivorans_C2A 1
Methanosarcina_mazei_Go1 2
Methanosphaerula_palustris_E1-9c 1
Methanoregula_boonei_6A8 1
Methanocorpusculum_labreanum_Z 2
Methanoplanus_petrolearius_DSM_11571 3
Methanoculleus_marisnigri_JR1 2
Methanococcus_voltae_A3 1
Methanococcus_vannielii_SB 1
Methanosphaera_stadtmanae_DSM_3091 1
Methanobrevibacter_sp._AbM4 2
Methanobrevibacter_ruminantium_M1 2
Methanobrevibacter_smithii_ATCC_35061 1
Complete_genome_sequence_of_Methanobacterium_sp._Mb1 1

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Strains
Genome     Number
Gordonibacter_pamelaeae_7-10-1-b 2
Clostridium_thermocellum_DSM_1313 1
Faecalibacterium_prausnitzii_L2-6 1
Clostridium_acidurici_9a 2
Desulfosporosinus_meridiei_DSM_13257 1
Desulfitobacterium_dichloroeliminans_LMG_P-21439 1
Desulfotomaculum_gibsoniae_DSM_7213 2
Clostridium_difficile_BI1 3
Clostridium_difficile_R20291 3
Clostridium_difficile_CD196 3
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 3
Coprococcus_catus_GD/7 2
Roseburia_intestinalis_XB6B4 1
Clostridium_sp._SY8519 2
Clostridium_saccharobutylicum_DSM_13864 2
Clostridium_autoethanogenum_DSM_10061 1
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 9
Clostridium_kluyveri_NBRC_12016 6
Clostridium_tetani_genome_12124569 1
Clostridium_perfringens_SM101 1
Clostridium_perfringens_str._13 1
Clostridium_pasteurianum_BC1 3
Clostridium_botulinum_H04402_065 3
Clostridium_botulinum_F_str._230613 2
Clostridium_botulinum_F_str._Langeland 2
Clostridium_botulinum_B1_str._Okra 2
Clostridium_botulinum_Ba4_str._657 2
Clostridium_botulinum_A2_str._Kyoto 2
Clostridium_botulinum_A3_str._Loch_Maree 3
Clostridium_botulinum_A_str._Hall 1
Clostridium_botulinum_A_str._ATCC_19397 2
Clostridium_acetobutylicum_DSM_1731 1
Clostridium_acetobutylicum_EA_2018 1
Streptococcus_pyogenes_MGAS2096 1
Prevotella_dentalis_DSM_3688 1
Alistipes_shahii_WAL_8301 1
Bacteroides_xylanisolvens_XB1A 2
Bacteroides_fragilis_638R 1
Bacteroides_fragilis_NCTC_9343 2
Brachyspira_pilosicoli_WesB 2
Brachyspira_pilosicoli_B2904 2
Brachyspira_pilosicoli_P43/6/78 2
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 2
Desulfovibrio_desulfuricans_ND132 1
Geobacter_sp._M18 1
Geobacter_sulfurreducens_PCA 1
Methanolobus_psychrophilus_R15 1
Methanosarcina_mazei_Tuc01 2
Methanoregula_formicica_Methanoregula_formicicum_SMSP 3
Candidatus_Methanomethylophilus_alvus_Mx1201 1
Candidatus_Methanomassiliicoccus_intestinalis_Issoire-Mx1 2
Methanococcus_maripaludis_C6 1
Methanococcus_maripaludis_C7 1

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Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 2
TargetDB__(Targets) 10
STRING_v9.0.5_(STRING) 121
Uniprot_2018_03_genome 9612
NCBI_2017_08_genome 6975

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