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Domain combinations for 52242,52540,_gap_,51703 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52242 - Cobalamin (vitamin B12)-binding domain
52540 - P-loop containing nucleoside triphosphate hydrolases
51703 - Cobalamin (vitamin B12)-dependent enzymes

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Amphimedon_queenslandica 1
Conexibacter_woesei_DSM_14684 1
Thermobispora_bispora_DSM_43833 1
Modestobacter_marinus 1
Frankia_symbiont_of_Datisca_glomerata 1
Frankia_sp._EAN1pec 1
Frankia_alni_ACN14a 1
Thermobifida_fusca_YX 1
Streptosporangium_roseum_DSM_43021 1
Streptomyces_bingchenggensis_BCW-1 1
Streptomyces_violaceusniger_Tu_4113 1
Streptomyces_scabiei_87.22 1
Actinosynnema_mirum_DSM_43827 1
Saccharomonospora_viridis_DSM_43017 1
Pseudonocardia_dioxanivorans_CB1190 1
Amycolatopsis_mediterranei_U32 1
Nocardia_farcinica_IFM_10152 1
Intrasporangium_calvum_DSM_43043 1
Deinococcus_proteolyticus_MRP 1
Heliobacterium_modesticaldum_Ice1 1
Kyrpidia_tusciae_DSM_2912 1
Brevibacillus_brevis_NBRC_100599 1
Paenibacillus_sp._JDR-2 1
Bacillus_selenitireducens_MLS10 1
Solibacillus_silvestris_StLB046 1
Geobacillus_thermoglucosidasius_C56-YS93 1
Lysinibacillus_sphaericus_C3-41 1
Anoxybacillus_flavithermus_WK1 1
Geobacillus_thermoleovorans_CCB_US3_UF5 1
Geobacillus_kaustophilus_HTA426 1
Geobacillus_sp._GHH01 1
Geobacillus_sp._WCH70 1
Geobacillus_thermodenitrificans_NG80-2 1
Halobacillus_halophilus_DSM_2266 1
Bacillus_sp._1NLA3E 1
Bacillus_halodurans_C-125 1
Bacillus_pseudofirmus_OF4 1
Bacillus_cellulosilyticus_DSM_2522 1
Bacillus_megaterium_DSM_319 1
Bacillus_coagulans_2-6 1
Gemmatimonas_aurantiaca_T-27 1
Haliscomenobacter_hydrossis_DSM_1100 1
Saprospira_grandis_str._Lewin 1
Chitinophaga_pinensis_DSM_2588 1
Salinibacter_ruber_M8 1
Rhodothermus_marinus_DSM_4252 1
Flexibacter_litoralis_DSM_6794 1
Belliella_baltica_DSM_15883 1
Marivirga_tractuosa_DSM_4126 1
Fibrella_aestuarina 1
Spirosoma_linguale_DSM_74 1
Runella_slithyformis_DSM_19594 1
Solitalea_canadensis_DSM_3403 1
Pedobacter_heparinus_DSM_2366 1
Fluviicola_taffensis_DSM_16823 1
Owenweeksia_hongkongensis_DSM_17368 1
Zunongwangia_profunda_SM-A87 1
Krokinobacter_sp._4H-3-7-5 1
Gramella_forsetii_KT0803 1
Lacinutrix_sp._5H-3-7-4 1
Robiginitalea_biformata_HTCC2501 1
Croceibacter_atlanticus_HTCC2559 1
Aequorivita_sublithincola_DSM_14238 1
Muricauda_ruestringensis_DSM_13258 1
Cellulophaga_algicola_DSM_14237 1
Cellulophaga_lytica_DSM_7489 1
Polaribacter_sp._MED152 1
Weeksella_virosa_DSM_16922 1
Flavobacterium_indicum_GPTSA100-9 1
Flavobacterium_psychrophilum_JIP02/86 1
Flavobacterium_branchiophilum_FL-15 1
Flavobacterium_columnare_ATCC_49512 1
Flavobacterium_johnsoniae_UW101 1
Waddlia_chondrophila_WSU_86-1044 1
Turneriella_parva_DSM_21527 1
Leptospira_interrogans_serovar_Lai_str._IPAV 1
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 1
Bacteriovorax_marinus_SJ 1
Bdellovibrio_bacteriovorus_HD100 1
Desulfarculus_baarsii_DSM_2075 1
Desulfomonile_tiedjei_DSM_6799 1
Desulfobulbus_propionicus_DSM_2032 1
Desulfatibacillum_alkenivorans_AK-01 1
Desulfobacterium_autotrophicum_HRM2 1
Desulfococcus_oleovorans_Hxd3 1
Geobacter_sp._M21 1
Geobacter_uraniireducens_Rf4 1
Geobacter_bemidjiensis_Bem 1
Geobacter_metallireducens_GS-15 1
Anaeromyxobacter_sp._Fw109-5 1
Stigmatella_aurantiaca_DW4/3-1 1
Corallococcus_coralloides_DSM_2259 1
Myxococcus_xanthus_DK_1622 1
Myxococcus_fulvus_HW-1 1
Dechloromonas_aromatica_RCB 1
Thauera_sp._MZ1T 1
Azoarcus_sp._BH72 1
Aromatoleum_aromaticum_EbN1 1
Dechlorosoma_suillum_PS 1
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 1
Methylibium_petroleiphilum_PM1 1
Thiomonas_arsenitoxydans 1
Thiomonas_intermedia_K12 1
Rubrivivax_gelatinosus_IL144 1
Leptothrix_cholodnii_SP-6 1
Burkholderia_phymatum_STM815 1
Ralstonia_eutropha_JMP134 1
Cupriavidus_taiwanensis_LMG_19424 1
Cupriavidus_metallidurans_CH34 1
Cupriavidus_necator_N-1 1
Ralstonia_eutropha_H16 1
Ralstonia_pickettii_12D 1
Ralstonia_solanacearum_CFBP2957 1
Polaromonas_naphthalenivorans_CJ2 1
Rhodoferax_ferrireducens_T118 1
Rhodanobacter_denitrificans 1
Pseudoxanthomonas_suwonensis_11-1 1
Nitrosococcus_halophilus_Nc4 1
Nitrosococcus_oceani_ATCC_19707 1
Cycloclasticus_sp._P1 1

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Strains
Genome     Number
Frankia_sp._EuI1c 1
Frankia_sp._CcI3 1
Streptomyces_rapamycinicus_NRRL_5491 1
Saccharothrix_espanaensis_DSM_44229 1
Amycolatopsis_mediterranei_RB 1
Amycolatopsis_mediterranei_S699 1
Amycolatopsis_mediterranei_S699 1
Amycolatopsis_orientalis_HCCB10007 1
Nocardia_brasiliensis_ATCC_700358 1
Geobacillus_sp._C56-T3 1
Geobacillus_sp._Y4.1MC1 1
Geobacillus_sp._Y412MC52 1
Geobacillus_sp._Y412MC61 1
Bacillus_infantis_NRRL_B-14911 1
Bacillus_megaterium_WSH-002 1
Bacillus_megaterium_QM_B1551 1
Bacillus_coagulans_36D1 1
Salinibacter_ruber_DSM_13855 1
Rhodothermus_marinus_SG0.5JP17-172 1
Echinicola_vietnamensis_DSM_17526 1
Nonlabens_dokdonensis_DSW-6 1
Psychroflexus_torquis_ATCC_700755 1
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 1
Leptospira_interrogans_serovar_Lai_str._56601 1
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 1
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 1
Bdellovibrio_exovorus_JSS 1
Bdellovibrio_bacteriovorus_str._Tiberius 1
Desulfobacula_toluolica_Tol2 1
Geobacter_sp._M18 1
Myxococcus_stipitatus_DSM_14675 1
Ralstonia_pickettii_12J 1
Ralstonia_solanacearum_FQY_4 1
Ralstonia_solanacearum_Po82 1
Ralstonia_solanacearum_PSI07 1
Ralstonia_solanacearum_CMR15 1
Ralstonia_solanacearum_GMI1000 1
Cycloclasticus_zancles_7-ME 1

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Others
Genome     Number
Uniprot_2018_03_genome 24950
NCBI_2017_08_genome 3361
TargetDB__(Targets) 1
Protein_Data_Bank_(all_PDB_sequenc) 14
STRING_v9.0.5_(STRING) 60

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