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Domain combinations for 52440,56059,51246,_gap_,50891,160467,50891,_gap_,51230 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52440 - PreATP-grasp domain
56059 - Glutathione synthetase ATP-binding domain-like
51246 - Rudiment single hybrid motif
50891 - Cyclophilin-like
160467 - PH0987 N-terminal domain-like
50891 - Cyclophilin-like
51230 - Single hybrid motif

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Sporisorium_reilianum_22 1
Serpula_lacrymans_var._lacrymans_S7.9_ 1
Coniophora_puteana 1
Hydnomerulius_pinastri_v2.0 1
Amanita_thiersii_Skay4041_v1.0 1
Galerina_marginata_v1.0 1
Agaricus_bisporus_var._bisporus_ 1
Gloeophyllum_trabeumv1.0 1
Punctularia_strigosozonata_v1.0 1
Fomitiporia_mediterranea_v1.0 1
Postia_placenta_ 1
Wolfiporia_cocos_MD-104_SS10__v1.0 1
Fomitopsis_pinicolav1.0 1
Fomitopsis_pinicola_FP-58527_SS1_v3.0 1
Dichomitus_squalens 1
Magnaporthe_grisea_70-15_ 0
Verticillium_dahliae_VdLs.17_ 0
Glomerella_graminicola_22 1
Nectria_haematococca_mpVI_ 1
Trichoderma_atroviride_ 1
Trichoderma_virens_Gv29-8_ 1
Trichoderma_harzianum_CBS_226.95_v1.0 1
Amorphotheca_resinae_v1.0   (Creosote fungus)   1
Setosphaeria_turcica_v1.0 1
Cochliobolus_miyabeanus_ATCC_44560_v1.0 1
Cochliobolus_victoriae_FI3_v1.0 1
Cochliobolus_carbonum_26-R-13_v1.0 1
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   1
Cochliobolus_lunatus_m118_v2.0 1
Pyrenophora_teres_f._teres_22 1
Pyrenophora_tritici-repentis_ 1
Stagonospora_nodorum_ 1
Zasmidium_cellare_ATCC_36951_v1.0 1
Dothistroma_septosporum 1
Septoria_musiva_v1.0 1
Mycosphaerella_fijiensis_CIRAD86_ 1
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 1
Paracoccidioides_brasiliensis_Pb18_ 1
Penicillium_chrysogenum_Wisconsin_54-1255_ 1
Penicillium_chrysogenum_v1.0 1
Aspergillus_acidus_v1.0 1
Aspergillus_brasiliensis_v1.0 1
Aspergillus_nidulans_FGSC_A4_ 1
Aspergillus_sydowii_v1.0 1
Aspergillus_versicolor_v1.0 1
Aspergillus_glaucus 1
Aspergillus_carbonarius_ITEM_5010_ 1
Neosartorya_fischeri_NRRL_181_ 1
Aspergillus_tubingensis_v1.0 1
Aspergillus_wentii_v1.0 1
Aspergillus_niger_22 1
Aspergillus_niger_ATCC_1015_ 1
Aspergillus_flavus_NRRL3357_ 1
Aspergillus_clavatus_NRRL_1_ 1
Penicillium_marneffei_ATCC_18224_ 1
Hansenula_polymorpha_v2.0 1
Dekkera_bruxellensis_CBS_2499_v2.0 0
Pichia_membranifaciensv1.0 0
Candida_tanzawaensis_NRRL_Y-17324__v1.0 0
Candida_dubliniensis_CD36_ 0
Candida_tropicalis_MYA-3404_ 0
Candida_parapsilosis_ 0
Candida_albicans_SC5314 0
Lodderomyces_elongisporus_NRRL_YB-4239_ 0
Babjeviella_inositovora_NRRL_Y-12698_v1.0 0
Pichia_stipitis_CBS_6054_ 0
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 0
Wickerhamomyces_anomalus 0
Pichia_pastoris_GS115_ 0
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 0
Candida_lusitaniae_ATCC_42720_ 0
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 0
Vanderwaltozyma_polyspora_DSM_70294_ 0
Kluyveromyces_thermotolerans_CBS_6340 0
Lachancea_kluyveri_ 0
Kluyveromyces_waltii 0
Ashbya_gossypii_ATCC_10895_ 0
Zygosaccharomyces_rouxii_ 0
Saccharomyces_paradoxus_MIT 0
Saccharomyces_cerevisiae_76   (Baker's yeast)   0
Saccharomyces_bayanus_MIT 0
Kluyveromyces_lactis 0
Catenaria_anguillulae_PL171_v1.0 0
Allomyces_macrogynus_ATCC_38327_ 0
Coccomyxa_subellipsoidea_sp._C-169_v2 1
Asterochloris_sp._Cgr/DA1pho_v1.0 1
Chlorella_variabilis_sp._NC64A_ 1
Chlorella_vulgaris_ 0
Chlamydomonas_reinhardtii_4.0 1
Synechococcus_sp._PCC_7502 1
Gloeocapsa_sp._PCC_7428 1
Gloeobacter_violaceus_PCC_7421 1
Calothrix_sp._PCC_7507 1
Kineococcus_radiotolerans_SRS30216 1
Catenulispora_acidiphila_DSM_44928 1
Kitasatospora_setae_KM-6054 1
Streptomyces_bingchenggensis_BCW-1 1
Streptomyces_avermitilis_MA-4680 1
Streptomyces_scabiei_87.22 1
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 1
Rhodococcus_jostii_RHA1 1
Rhodococcus_equi_103S 1
Rhodococcus_opacus_B4 1
Nocardia_cyriacigeorgica_GUH-2 1
Amycolicicoccus_subflavus_DQS3-9A1 1
Mycobacterium_sp._JLS 1
Corynebacterium_efficiens_YS-314 1
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 1
Cellulomonas_flavigena_DSM_20109 1
Arthrobacter_phenanthrenivorans_Sphe3 1
Arthrobacter_aurescens_TC1 1
Arthrobacter_sp._Rue61a 1
Arthrobacter_sp._FB24 1
Ethanoligenens_harbinense_YUAN-3 1
Sulfobacillus_acidophilus_DSM_10332 1
Syntrophobotulus_glycolicus_DSM_8271 1
Clostridium_lentocellum_DSM_5427 1
Roseburia_intestinalis 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 1
Paenibacillus_sp._JDR-2 1
Paenibacillus_mucilaginosus_3016 1
Bacillus_sp._1NLA3E 1
Bacillus_megaterium_DSM_319 1
Coraliomargarita_akajimensis_DSM_45221 1
Granulicella_mallensis_MP5ACTX8 1
Arcobacter_sp._L 1
Sulfuricurvum_kujiense_DSM_16994 1
Wolinella_succinogenes_DSM_1740 1
Sorangium_cellulosum_'So_ce_56' 1
Dechloromonas_aromatica_RCB 1
Thiomonas_arsenitoxydans 1
Burkholderia_phytofirmans_PsJN 1
Burkholderia_phymatum_STM815 1
Burkholderia_xenovorans_LB400 1
Ralstonia_eutropha_JMP134 1
Burkholderia_sp._RPE64 1
Burkholderia_sp._CCGE1002 1
Burkholderia_cenocepacia_HI2424 1
Burkholderia_gladioli_BSR3 1
Verminephrobacter_eiseniae_EF01-2 1
Polaromonas_naphthalenivorans_CJ2 1
Herbaspirillum_seropedicae_SmR1 1
Bordetella_petrii_DSM_12804 1
Achromobacter_xylosoxidans_A8 1
Achromobacter_xylosoxidans 1
Nitrosospira_multiformis_ATCC_25196 1
Nitrosomonas_sp._Is79A3 1
Nitrosomonas_eutropha_C91 1
Nitrosomonas_europaea_ATCC_19718 1
Sideroxydans_lithotrophicus_ES-1 1
Gallionella_capsiferriformans_ES-2 1
Methylotenera_versatilis_301 1
Methylovorus_sp._MP688 1
Methylovorus_glucosetrophus_SIP3-4 1
Asticcacaulis_excentricus_CB_48 1
Caulobacter_sp._K31 1
Caulobacter_crescentus_NA1000 1
Novosphingobium_sp._PP1Y 1
Novosphingobium_aromaticivorans_DSM_12444 1
Sphingobium_japonicum_UT26S 1
Granulibacter_bethesdensis_CGDNIH1 1
Acidiphilium_multivorum_AIU301 1
Acidiphilium_cryptum_JF-5 1
Acetobacter_pasteurianus_IFO_3283-01 1
Xanthobacter_autotrophicus_Py2 1
Azorhizobium_caulinodans_ORS_571 1
Methylobacterium_chloromethanicum_CM4 1
Methylobacterium_extorquens_AM1 1
Methylobacterium_populi_BJ001 1
Parvibaculum_lavamentivorans_DS-1 1
Rhizobium_etli_CIAT_652 1
Rhizobium_leguminosarum_bv._viciae_3841 1
Agrobacterium_radiobacter_K84 1
Methylocella_silvestris_BL2 1
Hyphomicrobium_sp._MC1 1
Rhodopseudomonas_palustris_BisA53 1
Saccharophagus_degradans_2-40 1
Teredinibacter_turnerae_T7901 1
Cellvibrio_japonicus_Ueda107 2
Tolumonas_auensis_DSM_9187 1
Marinobacter_adhaerens_HP15 1
Marinobacter_sp._BSs20148 1
Marinomonas_posidonica_IVIA-Po-181 1
Pseudoxanthomonas_spadix_BD-a59 1
Halothiobacillus_neapolitanus_c2 1
Thioalkalivibrio_sulfidophilus_HL-EbGr7 1
Halorhodospira_halophila_SL1 1
Rahnella_sp._Y9602 1
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 1
Serratia_sp._ATCC_39006 1
Dickeya_zeae_Ech1591 1
Pectobacterium_wasabiae_WPP163 1
Pectobacterium_sp._SCC3193 1
Pectobacterium_atrosepticum_SCRI1043 1
Pectobacterium_carotovorum_subsp._carotovorum_PC1 1
Pantoea_sp._At-9b 2
Pantoea_vagans_C9-1 2
Pantoea_ananatis_LMG_20103 1
Erwinia_tasmaniensis_Et1/99 1
Erwinia_billingiae_Eb661 1
Enterobacteriaceae_bacterium_strain_FGI_57 2
Klebsiella_oxytoca_E718 1
Klebsiella_variicola_At-22 1
Enterobacter_asburiae_LF7a 1
Enterobacter_cloacae_subsp._dissolvens_SDM 1
Pseudomonas_sp._TKP 1
Pseudomonas_sp._UW4 1
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 1
Pseudomonas_syringae_pv._tomato_str._DC3000 1
Pseudomonas_fulva_12-X 1
Acinetobacter_oleivorans_DR1 1
Acinetobacter_calcoaceticus_PHEA-2 1
Thiomicrospira_crunogena_XCL-2 1

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Strains
Genome     Number
Paracoccidioides_brasiliensis_Pb01_ 1
Paracoccidioides_brasiliensis_Pb03_ 1
Candida_albicans_WO-1_ 0
Saccharomyces_cerevisiae_UC5 0
Saccharomyces_cerevisiae_PW5 0
Saccharomyces_cerevisiae_CBS7960 0
Saccharomyces_cerevisiae_T7 0
Saccharomyces_cerevisiae_VL3 0
Saccharomyces_cerevisiae_AWRI796 0
Saccharomyces_cerevisiae_Sigma1278b 0
Saccharomyces_cerevisiae_W303 0
Saccharomyces_cerevisiae_JAY291 0
Saccharomyces_cerevisiae_CLIB215 0
Saccharomyces_cerevisiae_YJM789_ 0
Saccharomyces_cerevisiae_YJM789 0
Saccharomyces_cerevisiae_RM11-1a 0
Saccharomyces_cerevisiae_RM11-1a_ 0
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   0
Chamaesiphon_minutus_PCC_6605 1
Oscillatoria_nigro-viridis_PCC_7112 1
Cyanothece_sp._PCC_7425 1
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 1
Frankia_sp._EuI1c 1
Streptomyces_collinus_Tu_365 2
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 1
Amycolatopsis_orientalis_HCCB10007 1
Mycobacterium_sp._KMS 1
Mycobacterium_sp._MCS 1
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 1
Sulfobacillus_acidophilus_TPY 1
Roseburia_intestinalis_XB6B4 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 1
Paenibacillus_mucilaginosus_KNP414 1
Paenibacillus_mucilaginosus_K02 1
Bacillus_megaterium_WSH-002 1
Bacillus_coagulans_36D1 1
Arcobacter_butzleri_7h1h 1
Burkholderia_phenoliruptrix_BR3459a 1
Burkholderia_sp._YI23 1
Burkholderia_sp._CCGE1001 1
Burkholderia_sp._KJ006 1
Burkholderia_cenocepacia_MC0-3 1
Burkholderia_cenocepacia_AU_1054 1
Burkholderia_cenocepacia_J2315 1
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 1
Nitrosomonas_sp._AL212 1
Caulobacter_crescentus_CB15 1
Magnetospirillum_gryphiswaldense_MSR-1_v2 1
Gluconobacter_oxydans_H24 1
Acetobacter_pasteurianus_386B 1
Acetobacter_pasteurianus_IFO_3283-12 1
Acetobacter_pasteurianus_IFO_3283-32 1
Acetobacter_pasteurianus_IFO_3283-26 1
Acetobacter_pasteurianus_IFO_3283-22 1
Acetobacter_pasteurianus_IFO_3283-07 1
Acetobacter_pasteurianus_IFO_3283-03 1
Methylobacterium_extorquens_DM4 1
Methylobacterium_extorquens_PA1 1
Rhizobium_etli_CFN_42 1
Rhizobium_etli_bv._mimosae_str._Mim1 1
Rhizobium_tropici_CIAT_899 1
Rhizobium_leguminosarum_bv._trifolii_WSM2304 1
Rhizobium_leguminosarum_bv._trifolii_WSM1325 1
Rhodopseudomonas_palustris_DX-1 1
Rhodopseudomonas_palustris_TIE-1 1
Rhodopseudomonas_palustris_BisB5 1
Rhodopseudomonas_palustris_BisB18 1
Rhodopseudomonas_palustris_CGA009 1
Thalassolituus_oleivorans_MIL-1 1
Rahnella_aquatilis_HX2 1
Dickeya_dadantii_Ech586 1
Dickeya_dadantii_3937 1
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 1
Pantoea_ananatis_LMG_5342 2
Pantoea_ananatis_PA13 2
Pantoea_ananatis_AJ13355 2
Raoultella_ornithinolytica_B6 1
Klebsiella_oxytoca_KCTC_1686 1
Klebsiella_pneumoniae_342 1
Enterobacter_cloacae_EcWSU1 1
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 1
Pseudomonas_stutzeri_DSM_4166 1
Pseudomonas_stutzeri_RCH2 1
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 1
Pseudomonas_fluorescens_F113 1
Pseudomonas_fluorescens_Pf0-1 1
Pseudomonas_resinovorans_NBRC_106553 1
Acinetobacter_genomosp._13TU__RUH2624 1
Acinetobacter_calcoaceticus_ruh2202 1
Acinetobacter_baumannii_ZW85-1 1
Acinetobacter_baumannii_TYTH-1 1
Acinetobacter_baumannii_BJAB0868 1
Acinetobacter_baumannii_BJAB0715 1
Acinetobacter_baumannii_BJAB07104 1
Acinetobacter_baumannii_TCDC-AB0715 1
Acinetobacter_baumannii_D1279779 1
Acinetobacter_baumannii_MDR-TJ 1
Acinetobacter_baumannii_1656-2 1
Acinetobacter_baumannii__ATCC_19606 1
Acinetobacter_baumannii_AB307-0294 1
Acinetobacter_baumannii_MDR-ZJ06 1
Acinetobacter_baumannii_ACICU 1
Acinetobacter_radioresistens__SH164 1
Acinetobacter_johnsonii__SH046 1
Acinetobacter_lwoffii__SH145 1

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Longest transcript per gene
Genome     Number
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   0

Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 13
STRING_v9.0.5_(STRING) 89
Uniprot_2018_03_genome 98427
NCBI_2017_08_genome 6276

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