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Domain combinations for 52518,52922,52518,53323,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52518 - Thiamin diphosphate-binding fold (THDP-binding)
52922 - TK C-terminal domain-like
52518 - Thiamin diphosphate-binding fold (THDP-binding)
53323 - Pyruvate-ferredoxin oxidoreductase, PFOR, domain III

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Phytophthora_capsici_ 0
Guillardia_theta_CCMP2712_v1.0_ 1
Conexibacter_woesei_DSM_14684 1
Ilumatobacter_coccineus 1
Streptosporangium_roseum_DSM_43021 1
Pseudonocardia_dioxanivorans_CB1190 2
Saccharopolyspora_erythraea_NRRL_2338 1
Amycolatopsis_mediterranei_U32 1
Nocardioides_sp._JS614 1
Salinispora_tropica_CNB-440 1
Tsukamurella_paurometabola_DSM_20162 0
Gordonia_sp._KTR9 1
Gordonia_polyisoprenivorans_VH2 2
Rhodococcus_jostii_RHA1 1
Rhodococcus_erythropolis_PR4 1
Amycolicicoccus_subflavus_DQS3-9A1 1
Mycobacterium_abscessus_ATCC_19977 1
Mycobacterium_sp._JLS 1
Mycobacterium_intracellulare_ATCC_13950 1
Mycobacterium_gilvum_PYR-GCK 1
Mycobacterium_smegmatis_str._MC2_155 1
Corynebacterium_jeikeium_K411 1
Methylacidiphilum_infernorum_V4 1
Dechloromonas_aromatica_RCB 1
Azoarcus_sp._KH32C 2
Azoarcus_sp._BH72 1
Dechlorosoma_suillum_PS 1
Pseudogulbenkiania_sp._NH8B 1
Chromobacterium_violaceum_ATCC_12472 1
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 1
Burkholderia_rhizoxinica_HKI_454 1
Burkholderia_phymatum_STM815 1
Burkholderia_xenovorans_LB400 2
Ralstonia_eutropha_JMP134 1
Cupriavidus_taiwanensis_LMG_19424 1
Cupriavidus_metallidurans_CH34 1
Cupriavidus_necator_N-1 3
Ralstonia_eutropha_H16 1
Burkholderia_sp._RPE64 1
Burkholderia_ambifaria_AMMD 2
Alicycliphilus_denitrificans_K601 1
Delftia_sp._Cs1-4 1
Collimonas_fungivorans_Ter331 1
Herbaspirillum_seropedicae_SmR1 2
Advenella_kashmirensis_WT001 1
Bordetella_petrii_DSM_12804 1
Bordetella_avium_197N 1
Achromobacter_xylosoxidans_A8 2
Achromobacter_xylosoxidans 1
Asticcacaulis_excentricus_CB_48 1
Phenylobacterium_zucineum_HLK1 1
Sphingomonas_wittichii_RW1 4
Dinoroseobacter_shibae_DFL_12 1
Phaeobacter_gallaeciensis_2.10 1
Pseudovibrio_sp._FO-BEG1 1
Jannaschia_sp._CCS1 1
Ruegeria_pomeroyi_DSS-3 1
Roseobacter_litoralis_Och_149 1
Rhodobacter_sphaeroides_ATCC_17029 1
Tistrella_mobilis_KA081020-065 1
Rhodospirillum_centenum_SW 1
Rhodospirillum_rubrum_F11 1
Azospirillum_lipoferum_4B 1
Azospirillum_sp._B510 1
Acidiphilium_multivorum_AIU301 1
Acidiphilium_cryptum_JF-5 1
Polymorphum_gilvum_SL003B-26A1 1
Micavibrio_aeruginosavorus_ARL-13 1
Xanthobacter_autotrophicus_Py2 1
Azorhizobium_caulinodans_ORS_571 1
Methylobacterium_nodulans_ORS_2060 1
Agrobacterium_radiobacter_K84 1
Mesorhizobium_sp._BNC1 1
Mesorhizobium_opportunistum_WSM2075 1
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 1
Mesorhizobium_loti_MAFF303099 1
Methylocella_silvestris_BL2 1
Nitrobacter_winogradskyi_Nb-255 1
Bradyrhizobium_japonicum_USDA_110 1
Methylocystis_sp._SC2 1
Colwellia_psychrerythraea_34H 1
Marinobacter_adhaerens_HP15 1
Pseudoxanthomonas_suwonensis_11-1 1
Stenotrophomonas_maltophilia_K279a 1
Xanthomonas_axonopodis_pv._citri_str._306 1
Xanthomonas_albilineans_GPE_PC73 1
Xanthomonas_oryzae_pv._oryzae_PXO99A 1
Xanthomonas_campestris_pv._campestris_str._B100 1
Pseudomonas_syringae_pv._tomato_str._DC3000 1
Pseudomonas_stutzeri_A1501 1
Pseudomonas_fulva_12-X 1
Pseudomonas_mendocina_ymp 1
Acinetobacter_oleivorans_DR1 1
Acinetobacter_calcoaceticus_PHEA-2 1
Cycloclasticus_sp._P1 1

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Strains
Genome     Number
Saccharothrix_espanaensis_DSM_44229 1
Amycolatopsis_mediterranei_RB 1
Amycolatopsis_mediterranei_S699 1
Amycolatopsis_mediterranei_S699 1
Amycolatopsis_orientalis_HCCB10007 1
Rhodococcus_pyridinivorans_SB3094 1
Rhodococcus_erythropolis_CCM2595 1
Mycobacterium_intracellulare_MOTT-02 1
Mycobacterium_gilvum_Spyr1 1
Mycobacterium_smegmatis_str._MC2_155 1
Burkholderia_sp._YI23 1
Burkholderia_pseudomallei_MSHR305 1
Burkholderia_pseudomallei_NCTC_13179 1
Burkholderia_ambifaria_MC40-6 1
Alicycliphilus_denitrificans_BC 1
Variovorax_paradoxus_EPS 1
Bordetella_bronchiseptica_253 1
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 1
Phaeobacter_gallaeciensis_DSM_17395 1
Phaeobacter_gallaeciensis_DSM_26640 1
Leisingera_methylohalidivorans_DSM_14336 2
Octadecabacter_antarcticus_307 1
Octadecabacter_arcticus_238 1
Rhodobacter_sphaeroides_KD131 1
Rhodobacter_sphaeroides_ATCC_17025 1
Rhodobacter_sphaeroides_2.4.1 1
Paracoccus_aminophilus_JCM_7686 1
Rhodospirillum_rubrum_ATCC_11170 1
Micavibrio_aeruginosavorus_EPB 1
Rhizobium_tropici_CIAT_899 1
Mesorhizobium_australicum_WSM2073 1
Rhodopseudomonas_palustris_DX-1 1
Rhodopseudomonas_palustris_TIE-1 2
Rhodopseudomonas_palustris_HaA2 1
Rhodopseudomonas_palustris_BisB5 1
Rhodopseudomonas_palustris_CGA009 1
Bradyrhizobium_sp._S23321 1
Bradyrhizobium_japonicum_USDA_6 1
Stenotrophomonas_maltophilia_D457 1
Stenotrophomonas_maltophilia_JV3 1
Stenotrophomonas_maltophilia_R551-3 1
Xanthomonas_citri_subsp._citri_Aw12879 1
Xanthomonas_campestris_pv._vesicatoria_str._85-10 1
Xanthomonas_axonopodis_pv._citrumelo_F1 0
Xanthomonas_axonopodis_Xac29-1 1
Xanthomonas_oryzae_pv._oryzicola_BLS256 1
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 1
Xanthomonas_oryzae_pv._oryzae_KACC_10331 1
Xanthomonas_campestris_pv._raphani_756C 1
Xanthomonas_campestris_pv._campestris_str._8004 1
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 1
Pseudomonas_syringae_pv._phaseolicola_1448A 1
Pseudomonas_syringae_pv._syringae_B728a 1
Pseudomonas_stutzeri_CCUG_29243 1
Pseudomonas_stutzeri_DSM_10701 1
Pseudomonas_stutzeri_DSM_4166 1
Pseudomonas_stutzeri_RCH2 1
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 1
Pseudomonas_resinovorans_NBRC_106553 1
Pseudomonas_mendocina_NK-01 1
Acinetobacter_genomosp._13TU__RUH2624 1
Acinetobacter_sp.__SH024 1
Acinetobacter_calcoaceticus_ruh2202 1
Acinetobacter_baumannii_ZW85-1 1
Acinetobacter_baumannii_TYTH-1 1
Acinetobacter_baumannii_BJAB0868 1
Acinetobacter_baumannii_BJAB0715 1
Acinetobacter_baumannii_BJAB07104 1
Acinetobacter_baumannii_TCDC-AB0715 1
Acinetobacter_baumannii_D1279779 1
Acinetobacter_baumannii_MDR-TJ 1
Acinetobacter_baumannii_1656-2 1
Acinetobacter_baumannii__ATCC_19606 1
Acinetobacter_baumannii_AB307-0294 1
Acinetobacter_baumannii_AYE 1
Acinetobacter_baumannii_MDR-ZJ06 1
Acinetobacter_baumannii_AB0057 1
Acinetobacter_baumannii_ACICU 1
Acinetobacter_radioresistens__SH164 1
Cycloclasticus_zancles_7-ME 1

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Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 5
STRING_v9.0.5_(STRING) 77
Uniprot_2018_03_genome 32928
NCBI_2017_08_genome 6919

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