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Domain combinations for 52518,52922,53323,54862,52518 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52518 - Thiamin diphosphate-binding fold (THDP-binding)
52922 - TK C-terminal domain-like
53323 - Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
54862 - 4Fe-4S ferredoxins
52518 - Thiamin diphosphate-binding fold (THDP-binding)

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Capitella_sp._I_ 0
Entamoeba_invadens_1.2 4
Chlorella_variabilis_sp._NC64A_ 1
Volvox_carteri_f._nagariensis_ 0
Volvox_carteri_v199 1
Chlamydomonas_reinhardtii_4.0 0
Giardia_lamblia_2.3 1
Cyanophora_paradoxa_ 0
Thalassiosira_pseudonana_CCMP1335 1
Perkinsus_marinus_ATCC_50983_ 1
Cryptosporidium_muris 0
Cryptosporidium_parvum_Iowa_II 0
Symbiodinium_minutum_clade_B1_v1.2 1
Trichomonas_vaginalis_ 7
Guillardia_theta_CCMP2712_v1.0_ 0
Acaryochloris_marina_MBIC11017 1
Synechocystis_sp._PCC_6803 1
Synechococcus_elongatus_PCC_7942 1
Microcoleus_sp._PCC_7113 1
Geitlerinema_sp._PCC_7407 1
Cyanothece_sp._PCC_8802 1
Halothece_sp._PCC_7418 1
Microcystis_aeruginosa_NIES-843 1
Rivularia_sp._PCC_7116 1
Calothrix_sp._PCC_7507 1
Anabaena_variabilis_ATCC_29413 2
Nostoc_sp._PCC_7107 1
Nostoc_punctiforme_PCC_73102 1
Nostoc_sp._PCC_7120 2
Nostoc_sp._PCC_7524 2
Anabaena_sp._90 2
Cryptobacterium_curtum_DSM_15641 1
Eggerthella_sp._YY7918 1
Eggerthella_lenta_DSM_2243 1
Slackia_heliotrinireducens_DSM_20476 1
Olsenella_uli_DSM_7084 1
Atopobium_parvulum_DSM_20469 1
Coriobacterium_glomerans_PW2 1
Frankia_alni_ACN14a 1
Propionibacterium_propionicum_F0230a 1
Propionibacterium_acnes_SK137 1
Propionibacterium_freudenreichii_subsp._shermanii_CIRM-BIA1 1
Mycobacterium_sp._JLS 1
Mycobacterium_vanbaalenii_PYR-1 1
Mycobacterium_rhodesiae_NBB3 1
Mycobacterium_marinum_M 1
Intrasporangium_calvum_DSM_43043 1
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 1
Anaerolinea_thermophila_UNI-1 1
Roseiflexus_sp._RS-1 1
Roseiflexus_castenholzii_DSM_13941 1
Chloroflexus_sp._MS-G 1
Chloroflexus_sp._Y-400-fl 1
Chloroflexus_aggregans_DSM_9485 1
Chloroflexus_aurantiacus_J-10-fl 1
Thermus_sp._CCB_US3_UF1 1
Thermus_scotoductus_SA-01 1
Anaerococcus_prevotii_DSM_20548 2
Finegoldia_magna_ATCC_29328 0
Veillonella_parvula_DSM_2008 1
Megasphaera_elsdenii_DSM_20460 3
Acidaminococcus_intestini_RyC-MR95 4
Acidaminococcus_fermentans_DSM_20731 1
Selenomonas_sputigena_ATCC_35185 1
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 1
Natranaerobius_thermophilus_JW/NM-WN-LF 2
Symbiobacterium_thermophilum_IAM_14863 1
Clostridiales_genomosp._BVAB3_str._UPII9-5 1
Clostridium_clariflavum_DSM_19732 3
Eubacterium_siraeum 1
Clostridium_cellulolyticum_H10 2
Clostridium_thermocellum_ATCC_27405 1
Ethanoligenens_harbinense_YUAN-3 1
Faecalibacterium_prausnitzii 1
Ruminococcus_sp. 1
Ruminococcus_albus_7 1
Oscillibacter_valericigenes_Sjm18-20 5
butyrate-producing_bacterium_SS3/4 1
Pelotomaculum_thermopropionicum_SI 1
Desulfosporosinus_acidiphilus_SJ4 2
Desulfosporosinus_orientis_DSM_765 2
Dehalobacter_sp._DCA 2
Dehalobacter_sp._CF 2
Syntrophobotulus_glycolicus_DSM_8271 1
Desulfitobacterium_hafniense_Y51 2
Desulfitobacterium_dehalogenans_ATCC_51507 2
Desulfotomaculum_acetoxidans_DSM_771 2
Acetobacterium_woodii_DSM_1030 1
Eubacterium_eligens_ATCC_27750 1
Eubacterium_limosum_KIST612 1
Clostridium_difficile_630 1
Clostridium_sticklandii_DSM_519 1
Filifactor_alocis_ATCC_35896 1
Clostridium_saccharolyticum_WM1 1
Clostridium_phytofermentans_ISDg 2
Clostridium_lentocellum_DSM_5427 3
[Ruminococcus]_obeum 1
[Ruminococcus]_torques 1
Eubacterium_rectale_M104/1 1
Eubacterium_rectale_ATCC_33656 1
Roseburia_hominis_A2-183 1
Roseburia_intestinalis 1
Butyrivibrio_proteoclasticus_B316 1
Butyrivibrio_fibrisolvens 1
Heliobacterium_modesticaldum_Ice1 1
Alkaliphilus_oremlandii_OhILAs 2
Alkaliphilus_metalliredigens_QYMF 2
Candidatus_Arthromitus_sp._SFB-mouse-Japan 1
Clostridium_sp._BNL1100 2
Clostridium_novyi_NT 1
Clostridium_ljungdahlii_DSM_13528 2
Clostridium_kluyveri_DSM_555 2
Clostridium_beijerinckii_NCIMB_8052 3
Clostridium_tetani_E88 2
Clostridium_perfringens_ATCC_13124 1
Clostridium_cellulovorans_743B 2
Clostridium_botulinum_A_str._ATCC_3502 2
Clostridium_acetobutylicum_ATCC_824 2
Thermoanaerobacterium_xylanolyticum_LX-11 2
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 2
Tepidanaerobacter_acetatoxydans_Re1 1
Thermoanaerobacter_tengcongensis_MB4 1
Moorella_thermoacetica_ATCC_39073 1
Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 2
Thermoanaerobacter_pseudethanolicus_ATCC_33223 2
Thermoanaerobacter_sp._X514 2
Thermoanaerobacter_italicus_Ab9 1
Thermoanaerobacter_wiegelii_Rt8.B1 2
Thermoanaerobacter_brockii_subsp._finnii_Ako-1 2
Halothermothrix_orenii_H_168 1
Halanaerobium_hydrogeniformans 1
Halanaerobium_praevalens_DSM_2228 1
Tetragenococcus_halophilus_NBRC_12172 1
Melissococcus_plutonius_DAT561 1
Enterococcus_sp._7L76 1
Enterococcus_hirae_ATCC_9790 0
Enterococcus_faecium_Aus0004 0
Enterococcus_faecalis_62 1
Lactococcus_garvieae_ATCC_49156 0
Lactococcus_lactis_subsp._cremoris_MG1363 0
Streptococcus_intermedius_JTH08 0
Listeria_welshimeri_serovar_6b_str._SLCC5334 0
Listeria_innocua_Clip11262 0
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 0
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 0
Listeria_ivanovii_subsp._ivanovii_PAM_55 0
Candidatus_Cloacamonas_acidaminovorans 1
Melioribacter_roseus_P3M 1
Ignavibacterium_album_JCM_16511 1
Pelodictyon_phaeoclathratiforme_BU-1 1
Chlorobium_luteolum_DSM_273 1
Chlorobium_chlorochromatii_CaD3 1
Chlorobium_phaeobacteroides_DSM_266 1
Chlorobium_phaeovibrioides_DSM_265 1
Chlorobium_limicola_DSM_245 1
Chlorobaculum_parvum_NCIB_8327 1
Chlorobium_tepidum_TLS 1
Chloroherpeton_thalassium_ATCC_35110 1
Prosthecochloris_aestuarii_DSM_271 1
Haliscomenobacter_hydrossis_DSM_1100 1
Niastella_koreensis_GR20-10 1
Cyclobacterium_marinum_DSM_745 1
Tannerella_forsythia_ATCC_43037 1
Paludibacter_propionicigenes_WB4 1
Odoribacter_splanchnicus_DSM_20712 1
Candidatus_Azobacteroides_pseudotrichonymphae_genomovar._CFP2 1
Bacteroides_sp._CF50 1
Prevotella_melaninogenica_ATCC_25845 1
Prevotella_intermedia_17 1
Prevotella_denticola_F0289 1
Prevotella_ruminicola_23 1
Porphyromonas_asaccharolytica_DSM_20707 0
Porphyromonas_gingivalis_ATCC_33277 1
Alistipes_finegoldii_DSM_17242 1
Bacteroides_salanitronis_DSM_18170 1
Bacteroides_helcogenes_P_36-108 1
Bacteroides_vulgatus_ATCC_8482 1
Bacteroides_thetaiotaomicron_VPI-5482 1
Bacteroides_fragilis_YCH46 1
Maribacter_sp._HTCC2170 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 1
Methylacidiphilum_infernorum_V4 1
Coraliomargarita_akajimensis_DSM_45221 2
Opitutus_terrae_PB90-1 1
Fretibacterium_fastidiosum 1
Aminobacterium_colombiense_DSM_12261 1
Thermanaerovibrio_acidaminovorans_DSM_6589 1
Anaerobaculum_mobile_DSM_13181 1
Spirochaeta_smaragdinae_DSM_11293 1
Sphaerochaeta_pleomorpha_str._Grapes 1
Sphaerochaeta_globus_str._Buddy 1
Sphaerochaeta_coccoides_DSM_17374 1
Spirochaeta_caldaria_DSM_7334 1
Treponema_azotonutricium_ZAS-9 1
Treponema_primitia_ZAS-2 1
Treponema_brennaborense_DSM_12168 1
Treponema_paraluiscuniculi_Cuniculi_A 1
Treponema_pallidum_subsp._pallidum_SS14 2
Treponema_denticola_ATCC_35405 1
Spirochaeta_thermophila_DSM_6192 1
Calditerrivibrio_nitroreducens_DSM_19672 1
Denitrovibrio_acetiphilus_DSM_12809 1
Deferribacter_desulfuricans_SSM1 1
Flexistipes_sinusarabici_DSM_4947 1
Mesotoga_prima_MesG1.Ag.4.2 1
Elusimicrobium_minutum_Pei191 1
Candidatus_Solibacter_usitatus_Ellin6076 1
Candidatus_Koribacter_versatilis_Ellin345 1
Acidobacterium_capsulatum_ATCC_51196 1
Streptobacillus_moniliformis_DSM_12112 1
Sebaldella_termitidis_ATCC_33386 1
Leptotrichia_buccalis_C-1013-b 1
Ilyobacter_polytropus_DSM_2926 1
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 2
Sulfurospirillum_deleyianum_DSM_6946 1
Sulfurospirillum_barnesii_SES-3 1
Campylobacter_hominis_ATCC_BAA-381 1
Campylobacter_lari_RM2100 1
Campylobacter_curvus_525.92 1
Campylobacter_concisus_13826 1
Campylobacter_jejuni_subsp._doylei_269.97 1
Campylobacter_sp._03-427 1
Campylobacter_fetus_subsp._fetus_82-40 1
uncultured_Sulfuricurvum_sp._RIFRC-1 1
Sulfuricurvum_kujiense_DSM_16994 1
Syntrophus_aciditrophicus_SB 1
Desulfurivibrio_alkaliphilus_AHT2 1
Desulfotalea_psychrophila_LSv54 1
Desulfobulbus_propionicus_DSM_2032 1
Desulfatibacillum_alkenivorans_AK-01 1
Desulfobacterium_autotrophicum_HRM2 1
Desulfococcus_oleovorans_Hxd3 1
Desulfohalobium_retbaense_DSM_5692 0
Desulfomicrobium_baculatum_DSM_4028 0
Desulfovibrio_piezophilus 0
Desulfovibrio_aespoeensis_Aspo-2 1
Lawsonia_intracellularis_PHE/MN1-00 1
Desulfovibrio_magneticus_RS-1 0
Desulfovibrio_alaskensis_G20 0
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 0
Desulfovibrio_salexigens_DSM_2638 1
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 1
Desulfovibrio_africanus_str._Walvis_Bay 0
Geobacter_daltonii_FRC-32 1
Geobacter_sp._M21 1
Geobacter_uraniireducens_Rf4 2
Geobacter_lovleyi_SZ 1
Geobacter_bemidjiensis_Bem 1
Geobacter_sulfurreducens_KN400 1
Geobacter_metallireducens_GS-15 1
Pelobacter_propionicus_DSM_2379 1
Pelobacter_carbinolicus_DSM_2380 2
Anaeromyxobacter_sp._Fw109-5 1
Anaeromyxobacter_dehalogenans_2CP-1 1
Dechloromonas_aromatica_RCB 1
Thiobacillus_denitrificans_ATCC_25259 1
Phenylobacterium_zucineum_HLK1 1
Novosphingobium_sp._PP1Y 1
Rhodobacter_capsulatus_SB_1003 1
Rhodospirillum_photometricum_DSM_122 1
Magnetospirillum_magneticum_AMB-1 1
Rhodospirillum_rubrum_F11 1
Azospirillum_lipoferum_4B 1
Azospirillum_sp._B510 1
Acetobacter_pasteurianus_IFO_3283-01 1
Methylocella_silvestris_BL2 1
Teredinibacter_turnerae_T7901 1
Tolumonas_auensis_DSM_9187 1
Aeromonas_veronii_B565 2
Aeromonas_salmonicida_subsp._salmonicida_A449 1
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 2
Vibrio_cholerae_O395 1
Photobacterium_profundum_SS9 1
Shewanella_sediminis_HAW-EB3 1
Marinobacter_adhaerens_HP15 1
Methylomonas_methanica_MC09 1
Methylococcus_capsulatus_str._Bath 1
Allochromatium_vinosum_DSM_180 1
Thiocystis_violascens_DSM_198 1
Baumannia_cicadellinicola_str._Hc_(Homalodisca_coagulata) 1
Edwardsiella_ictaluri_93-146 1
Edwardsiella_tarda_EIB202 2
Rahnella_sp._Y9602 1
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 2
Yersinia_pseudotuberculosis_IP_31758 1
Yersinia_pestis_Pestoides_F 1
Yersinia_enterocolitica_subsp._enterocolitica_8081 1
Serratia_sp._AS12 1
Serratia_sp._ATCC_39006 3
Serratia_plymuthica_AS9 1
Serratia_proteamaculans_568 1
Dickeya_dadantii_Ech703 2
Dickeya_zeae_Ech1591 1
Pectobacterium_wasabiae_WPP163 1
Pectobacterium_sp._SCC3193 1
Pectobacterium_atrosepticum_SCRI1043 2
Pectobacterium_carotovorum_subsp._carotovorum_PC1 1
Pantoea_sp._At-9b 2
Escherichia_blattae_DSM_4481 1
Cronobacter_turicensis_z3032 1
Cronobacter_sakazakii_ES15 1
Enterobacteriaceae_bacterium_strain_FGI_57 1
Shigella_sonnei_Ss046 1
Shigella_flexneri_5_str._8401 1
Shigella_dysenteriae_Sd197 1
Shigella_boydii_CDC_3083-94 1
Salmonella_bongori_NCTC_12419 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 1
Klebsiella_oxytoca_E718 2
Klebsiella_variicola_At-22 2
Klebsiella_pneumoniae_NTUH-K2044 1
Enterobacter_aerogenes_KCTC_2190 1
Escherichia_fergusonii_ATCC_35469 1
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 1
Enterobacter_sp._R4-368 2
Enterobacter_sp._638 1
Enterobacter_asburiae_LF7a 1
Enterobacter_cloacae_subsp._dissolvens_SDM 1
Citrobacter_rodentium_ICC168 1
Citrobacter_koseri_ATCC_BAA-895 1

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Strains
Genome     Number
Chroococcidiopsis_thermalis_PCC_7203 0
Synechocystis_sp._PCC_6803_substr._PCC-P 1
Synechocystis_sp._PCC_6803_substr._PCC-N 1
Synechocystis_sp._PCC_6803_substr._GT-I 1
Synechocystis_sp._PCC_6803 1
Cyanobium_gracile_PCC_6307 1
Synechococcus_sp._PCC_7002 1
Synechococcus_elongatus_PCC_6301 1
Oscillatoria_nigro-viridis_PCC_7112 1
Oscillatoria_acuminata_PCC_6304 1
Arthrospira_platensis_NIES-39 1
Cyanothece_sp._PCC_7822 1
Cyanothece_sp._PCC_7425 1
Cyanothece_sp._PCC_7424 1
Cyanothece_sp._ATCC_51142 1
Cyanothece_sp._PCC_8801 1
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 0
Calothrix_parietina_Calothrix_sp._PCC_6303 1
Cylindrospermum_stagnale_PCC_7417 1
Anabaena_cylindrica_PCC_7122 1
Gordonibacter_pamelaeae_7-10-1-b 1
Adlercreutzia_equolifaciens_DSM_19450 1
Frankia_sp._CcI3 1
Propionibacterium_avidum_44067 1
Propionibacterium_acnes_ATCC_11828 1
Propionibacterium_acnes_TypeIA2_P.acn31 1
Propionibacterium_acnes_TypeIA2_P.acn17 1
Propionibacterium_acnes_TypeIA2_P.acn33 1
Propionibacterium_acnes_C1 1
Propionibacterium_acnes_HL096PA1 1
Propionibacterium_acnes_6609 1
Propionibacterium_acnes_266 1
Propionibacterium_acnes_KPA171202 1
Propionibacterium_acidipropionici_ATCC_4875 1
Mycobacterium_liflandii_128FXT 1
Mycobacterium_sp._KMS 1
Mycobacterium_sp._MCS 1
Mycobacterium_kansasii_ATCC_12478 1
Thermus_oshimai_JL-2 1
[Eubacterium]_cylindroides_[Eubacterium]_cylindroides_T2-87 1
Eubacterium_siraeum_V10Sc8a 1
Clostridium_thermocellum_DSM_1313 1
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 2
Faecalibacterium_prausnitzii_L2-6 1
Ruminococcus_champanellensis_18P13 1
Clostridium_acidurici_9a 2
Desulfosporosinus_meridiei_DSM_13257 2
Desulfitobacterium_dichloroeliminans_LMG_P-21439 2
Desulfitobacterium_hafniense_DCB-2 2
Clostridium_difficile_BI1 1
Clostridium_difficile_R20291 1
Clostridium_difficile_CD196 1
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 1
Coprococcus_catus_GD/7 1
Roseburia_intestinalis_XB6B4 1
Candidatus_Arthromitus_sp._SFB-rat-Yit 1
Candidatus_Arthromitus_sp._SFB-mouse-Yit 1
Clostridium_sp._SY8519 1
Clostridium_saccharobutylicum_DSM_13864 2
Clostridium_autoethanogenum_DSM_10061 2
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 2
Clostridium_kluyveri_NBRC_12016 2
Clostridium_tetani_genome_12124569 2
Clostridium_perfringens_SM101 1
Clostridium_perfringens_str._13 1
Clostridium_pasteurianum_BC1 2
Clostridium_botulinum_H04402_065 2
Clostridium_botulinum_BKT015925 1
Clostridium_botulinum_F_str._230613 2
Clostridium_botulinum_F_str._Langeland 2
Clostridium_botulinum_E3_str._Alaska_E43 2
Clostridium_botulinum_B1_str._Okra 2
Clostridium_botulinum_Ba4_str._657 2
Clostridium_botulinum_A2_str._Kyoto 2
Clostridium_botulinum_A3_str._Loch_Maree 2
Clostridium_botulinum_A_str._Hall 2
Clostridium_botulinum_A_str._ATCC_19397 2
Clostridium_acetobutylicum_DSM_1731 2
Clostridium_acetobutylicum_EA_2018 2
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 2
Thermoanaerobacterium_thermosaccharolyticum_M0795 2
Thermoanaerobacter_sp._X513 2
Halobacteroides_halobius_DSM_5150 1
Carnobacterium_maltaromaticum_LMA28 1
Melissococcus_plutonius_ATCC_35311 1
Enterococcus_mundtii_QU_25 0
Enterococcus_casseliflavus_EC20 0
Enterococcus_faecium_Aus0085 0
Enterococcus_faecium_NRRL_B-2354 0
Enterococcus_faecium_DO 0
Enterococcus_faecalis_str._Symbioflor_1 1
Enterococcus_faecalis_D32 1
Enterococcus_faecalis_OG1RF 1
Enterococcus_faecalis_V583 1
Lactococcus_garvieae_Lg2 0
Lactococcus_lactis_subsp._lactis_IO-1 0
Lactococcus_lactis_subsp._lactis_CV56 1
Lactococcus_lactis_subsp._lactis_KF147 0
Lactococcus_lactis_subsp._lactis_Il1403 1
Lactococcus_lactis_subsp._cremoris_KW2 0
Lactococcus_lactis_subsp._cremoris_UC509.9 0
Lactococcus_lactis_subsp._cremoris_A76 0
Lactococcus_lactis_subsp._cremoris_NZ9000 0
Lactococcus_lactis_subsp._cremoris_SK11 0
Streptococcus_dysgalactiae_subsp._equisimilis_167 1
Streptococcus_dysgalactiae_subsp._equisimilis_ATCC_12394 1
Streptococcus_dysgalactiae_subsp._equisimilis_RE378 1
Streptococcus_iniae_SF1 0
Listeria_monocytogenes_EGD_sequence 0
Listeria_monocytogenes_serotype_4b_str._LL195 0
Listeria_monocytogenes_07PF0776 0
Listeria_monocytogenes_M7 0
Listeria_monocytogenes_J1-220 0
Listeria_monocytogenes_J1816 0
Listeria_monocytogenes_SLCC2376 0
Listeria_monocytogenes_SLCC5850 0
Listeria_monocytogenes_ATCC_19117 0
Listeria_monocytogenes_L312 0
Listeria_monocytogenes_SLCC2479 0
Listeria_monocytogenes_SLCC7179 0
Listeria_monocytogenes_SLCC2540 0
Listeria_monocytogenes_SLCC2378 0
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 0
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 0
Listeria_monocytogenes_serotype_7_str._SLCC2482 0
Listeria_monocytogenes_08-5578 0
Listeria_monocytogenes_08-5923 0
Listeria_monocytogenes_L99 0
Listeria_monocytogenes_HCC23 0
Listeria_monocytogenes_10403S 0
Listeria_monocytogenes_J0161 0
Listeria_monocytogenes_Finland_1998 0
Listeria_monocytogenes_FSL_R2-561 0
Listeria_monocytogenes_serotype_4b_str._F2365 0
Listeria_monocytogenes_EGD-e 0
Chlorobium_phaeobacteroides_BS1 1
Prevotella_sp._oral_taxon_299_str._F0039 1
Prevotella_dentalis_DSM_3688 1
Porphyromonas_gingivalis_TDC60 1
Porphyromonas_gingivalis_W83 1
Alistipes_shahii_WAL_8301 1
Bacteroides_xylanisolvens_XB1A 1
Bacteroides_fragilis_638R 1
Bacteroides_fragilis_NCTC_9343 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 1
Treponema_pedis_str._T_A4 1
Treponema_pallidum_str._Fribourg-Blanc 1
Treponema_pallidum_subsp._pertenue_str._Gauthier 1
Treponema_pallidum_subsp._pertenue_str._CDC2 1
Treponema_pallidum_subsp._pertenue_str._SamoaD 1
Treponema_pallidum_subsp._pallidum_str._Mexico_A 1
Treponema_pallidum_subsp._pallidum_str._Chicago 1
Treponema_pallidum_subsp._pallidum_DAL-1 1
Treponema_pallidum_subsp._pallidum_str._Nichols 1
Spirochaeta_thermophila_DSM_6578 1
Fusobacterium_nucleatum_subsp._vincentii_3_1_36A2 2
Fusobacterium_nucleatum_subsp._animalis_4_8 2
Campylobacter_jejuni_Waterborne_C.jejuni_Outbreak 1
Campylobacter_jejuni_RM1221 1
Campylobacter_jejuni_subsp._jejuni_00-2544 1
Campylobacter_jejuni_subsp._jejuni_00-2538 1
Campylobacter_jejuni_subsp._jejuni_00-2426 1
Campylobacter_jejuni_subsp._jejuni_00-2425 1
Campylobacter_jejuni_subsp._jejuni_PT14 1
Campylobacter_jejuni_subsp._jejuni_ICDCCJ07001 1
Campylobacter_jejuni_subsp._jejuni_S3 1
Campylobacter_jejuni_subsp._jejuni_M1 1
Campylobacter_jejuni_subsp._jejuni_IA3902 1
Campylobacter_jejuni_subsp._jejuni_81116 1
Campylobacter_jejuni_subsp._jejuni_81-176 1
Campylobacter_jejuni_subsp._jejuni_NCTC_11168-BN148 1
Campylobacter_jejuni_subsp._jejuni_NCTC_11168_=_ATCC_700819 1
Campylobacter_coli_76339 1
Campylobacter_coli_15-537360 1
Campylobacter_coli_CVM_N29710 1
Desulfocapsa_sulfexigens_DSM_10523 2
Desulfobacula_toluolica_Tol2 1
Lawsonia_intracellularis_N343 1
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 4
Desulfovibrio_vulgaris_RCH1 0
Desulfovibrio_vulgaris_str._'Miyazaki_F' 0
Desulfovibrio_vulgaris_str._Hildenborough 0
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 0
Desulfovibrio_desulfuricans_ND132 1
Geobacter_sp._M18 2
Geobacter_sulfurreducens_PCA 1
Anaeromyxobacter_sp._K 1
Anaeromyxobacter_dehalogenans_2CP-C 1
Sulfuricella_denitrificans_skB26 1
Rhodospirillum_rubrum_ATCC_11170 1
Acetobacter_pasteurianus_386B 1
Acetobacter_pasteurianus_IFO_3283-12 1
Acetobacter_pasteurianus_IFO_3283-01-42C 1
Acetobacter_pasteurianus_IFO_3283-32 1
Acetobacter_pasteurianus_IFO_3283-26 1
Acetobacter_pasteurianus_IFO_3283-22 1
Acetobacter_pasteurianus_IFO_3283-07 1
Acetobacter_pasteurianus_IFO_3283-03 1
Aeromonas_hydrophila_ML09-119 2
Vibrio_cholerae_LMA3984-4 1
Vibrio_cholerae_M66-2 1
Vibrio_cholerae_O395 1
Vibrio_cholerae_IEC224 1
Vibrio_cholerae_O1_str._2010EL-1786 1
Vibrio_cholerae_MJ-1236 1
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 1
Thioflavicoccus_mobilis_8321 1
Morganella_morganii_subsp._morganii_KT 1
Edwardsiella_tarda_C07-087 2
Edwardsiella_tarda_FL6-60 2
Rahnella_aquatilis_HX2 2
Yersinia_pseudotuberculosis_PB1/+ 1
Yersinia_pseudotuberculosis_YPIII 1
Yersinia_pseudotuberculosis_IP_32953 1
Yersinia_pestis_biovar_Microtus_str._91001 1
Yersinia_pestis_A1122 1
Yersinia_pestis_Z176003 1
Yersinia_pestis_D182038 1
Yersinia_pestis_D106004 1
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 1
Yersinia_pestis_Nepal516 1
Yersinia_pestis_Antiqua 1
Yersinia_pestis_CO92 1
Yersinia_pestis_KIM10+ 1
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 1
Yersinia_enterocolitica_subsp._palearctica_Y11 1
Serratia_sp._AS13 1
Serratia_plymuthica_S13 1
Serratia_plymuthica_4Rx13 1
Serratia_marcescens_FGI94 1
Serratia_marcescens_WW4 1
Serratia_liquefaciens_ATCC_27592 1
Dickeya_dadantii_Ech586 1
Dickeya_dadantii_3937 2
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 1
Cronobacter_sakazakii_CMCC_45402 1
Cronobacter_sakazakii_SP291 1
Cronobacter_sakazakii_ATCC_BAA-894 1
Raoultella_ornithinolytica_B6 1
Shigella_sonnei_53G 1
Shigella_flexneri_2002017 1
Shigella_flexneri_2a_str._2457T 1
Shigella_flexneri_2a_str._301 1
Shigella_dysenteriae_1617 1
Shigella_boydii_Sb227 1
Salmonella_bongori_N268-08 1
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 1
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 1
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 1
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 1
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 1
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 1
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 1
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 1
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 1
Salmonella_enterica_serovar_Bovismorbificans_genomics 1
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 1
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 1
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 1
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 1
Klebsiella_oxytoca_KCTC_1686 2
Klebsiella_pneumoniae_JM45 1
Klebsiella_pneumoniae_CG43 1
Klebsiella_pneumoniae_KCTC_2242 1
Klebsiella_pneumoniae_342 2
Klebsiella_pneumoniae_subsp._pneumoniae_1084 1
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 1
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 1
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 1
Enterobacter_aerogenes_EA1509E 1
Escherichia_coli_E24377A 1
Escherichia_coli_E._coli_PMV-1 1
Escherichia_coli_JJ1886 1
Escherichia_coli_LY180 1
Escherichia_coli_APEC_O78 1
Escherichia_coli_O7:K1_str._CE10 1
Escherichia_coli_O104:H4_str._2009EL-2050 1
Escherichia_coli_O104:H4_str._2009EL-2071 1
Escherichia_coli_O104:H4_str._2011C-3493 1
Escherichia_coli_NA114 1
Escherichia_coli_P12b 1
Escherichia_coli_str._'clone_D_i2' 1
Escherichia_coli_str._'clone_D_i14' 1
Escherichia_coli_UM146 1
Escherichia_coli_042 1
Escherichia_coli_Xuzhou21 1
Escherichia_coli_IHE3034 1
Escherichia_coli_UMNK88 1
Escherichia_coli_O83:H1_str._NRG_857C 1
Escherichia_coli_ABU_83972 1
Escherichia_coli_KO11FL 1
Escherichia_coli_KO11FL 1
Escherichia_coli_LF82 1
Escherichia_coli_ED1a 1
Escherichia_coli_IAI39 1
Escherichia_coli_UMN026 1
Escherichia_coli_55989 1
Escherichia_coli_S88 1
Escherichia_coli_IAI1 1
Escherichia_coli_W 1
Escherichia_coli_W 1
Escherichia_coli_DH1 1
Escherichia_coli_DH1 1
Escherichia_coli_ATCC_8739 1
Escherichia_coli_BL21(DE3) 1
Escherichia_coli_BL21(DE3) 1
Escherichia_coli_SMS-3-5 1
Escherichia_coli_SE15 1
Escherichia_coli_SE11 1
Escherichia_coli_APEC_O1 1
Escherichia_coli_O103:H2_str._12009 1
Escherichia_coli_UTI89 1
Escherichia_coli_536 1
Escherichia_coli_HS 1
Escherichia_coli_ETEC_H10407 1
Escherichia_coli_O55:H7_str._RM12579 1
Escherichia_coli_O55:H7_str._CB9615 1
Escherichia_coli_O26:H11_str._11368 1
Escherichia_coli_CFT073 1
Escherichia_coli_O111:H-_str._11128 1
Escherichia_coli_O127:H6_str._E2348/69 1
Escherichia_coli_O157:H7_str._TW14359 1
Escherichia_coli_O157:H7_str._EC4115 1
Escherichia_coli_O157:H7_str._Sakai 1
Escherichia_coli_O157:H7_str._EDL933 1
Escherichia_coli_BW2952 1
Escherichia_coli_str._K-12_substr._MG1655 1
Escherichia_coli_str._K-12_substr._W3110 1
Escherichia_coli_str._K-12_substr._DH10B 1
Escherichia_coli_B_str._REL606 1
Enterobacter_cloacae_SCF1 1
Enterobacter_cloacae_EcWSU1 1
Enterobacter_cloacae_subsp._cloacae_ENHKU01 1
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 1

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Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 8
NCBI_viral_sequences_(Viral) 2
Protozoadb_2010_08_(Protozoadb) 16
Protein_Data_Bank_(all_PDB_sequenc) 41
PDB_chains_(SCOP_1.75)_(PDB) 0
TargetDB__(Targets) 2
STRING_v9.0.5_(STRING) 284
Uniprot_2018_03_genome 77028
NCBI_2017_08_genome 30549

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