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Domain combinations for 52540,51045,51045,_gap_,50156,_gap_,50156,_gap_,50156,_gap_,50156,_gap_,50156,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52540 - P-loop containing nucleoside triphosphate hydrolases
51045 - WW domain
51045 - WW domain
50156 - PDZ domain-like
50156 - PDZ domain-like
50156 - PDZ domain-like
50156 - PDZ domain-like
50156 - PDZ domain-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   0
Pan_troglodytes_76_2.1.4   (Chimpanzee)   1
Gorilla_gorilla_76_3.1   (Western gorilla)   1
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   1
Papio_anubis_76   (Olive baboon)   1
Otolemur_garnettii_76_3   (Small-eared galago)   1
Ochotona_princeps_76   (American pika)   0
Sus_scrofa_76_10.2   (Pig)   1
Ailuropoda_melanoleuca_76_1   (Giant panda)   1
Felis_catus_76_6.2   (Domestic cat)   1
Equus_caballus_76_2   (Horse)   2
Loxodonta_africana_76_3   (African savanna elephant)   1
Echinops_telfairi_76   (Small Madagascar hedgehog)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   0
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   1
Ficedula_albicollis_76_1.0   (Collared flycatcher)   1
Lepisosteus_oculatus_76   (Spotted gar)   0
Poecilia_formosa_76   (Amazon molly)   0
Oreochromis_niloticus_76_1.0   (Nile tilapia)   2
Astyanax_mexicanus_76   (Mexican tetra)   0
Danio_rerio_76_9   (Zebrafish)   0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   0

Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   0
Pan_troglodytes_69_2.1.4   (Chimpanzee)   1
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   1
Otolemur_garnettii_69_3   (Small-eared galago)   1
Ochotona_princeps_69   (American pika)   0
Sus_scrofa_69_10.2   (Pig)   1
Ailuropoda_melanoleuca_69_1   (Giant panda)   1
Equus_caballus_69_2   (Horse)   1
Echinops_telfairi_69   (Small Madagascar hedgehog)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   0
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1
Gallus_gallus_69_2   (Chicken)   1
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   1
Oreochromis_niloticus_69_1.0   (Nile tilapia)   2
Danio_rerio_69_9   (Zebrafish)   0

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   0
Homo_sapiens__(NCBI_version)   (Human)   0
STRING_v9.0.5_(STRING) 4
Uniprot_2018_03_genome 2301
NCBI_2017_08_genome 88

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