SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain combinations for 52738,47757,53335,_gap_,55785,47384,55874,52172 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52738 - Methylesterase CheB, C-terminal domain
47757 - Chemotaxis receptor methyltransferase CheR, N-terminal domain
53335 - S-adenosyl-L-methionine-dependent methyltransferases
55785 - PYP-like sensor domain (PAS domain)
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Heliobacterium_modesticaldum_Ice1 1
Haliscomenobacter_hydrossis_DSM_1100 1
Dyadobacter_fermentans_DSM_18053 1
Rhodospirillum_rubrum_F11 0
Acidiphilium_cryptum_JF-5 0
Agrobacterium_sp._H13-3 0
Nitrosococcus_watsonii_C-113 1
Nitrosococcus_oceani_ATCC_19707 1

Strains
Genome     Number
Variovorax_paradoxus_EPS 1
Magnetospirillum_gryphiswaldense_MSR-1_v2 0
Rhodospirillum_rubrum_ATCC_11170 0
Hyphomicrobium_denitrificans_1NES1 0
Pseudomonas_monteilii_SB3101 1
Pseudomonas_monteilii_SB3078 1
Pseudomonas_putida_HB3267 1
Pseudomonas_putida_S16 1

Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 0
STRING_v9.0.5_(STRING) 3
Uniprot_2018_03_genome 2124
NCBI_2017_08_genome 97

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]