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Domain combinations for 52738,47757,53335,_gap_,55785,55785,47384,55874 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52738 - Methylesterase CheB, C-terminal domain
47757 - Chemotaxis receptor methyltransferase CheR, N-terminal domain
53335 - S-adenosyl-L-methionine-dependent methyltransferases
55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain)
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Gloeobacter_violaceus_PCC_7421 2
Rivularia_sp._PCC_7116 0
Anabaena_variabilis_ATCC_29413 0
'Nostoc_azollae'_0708 0
Nostoc_sp._PCC_7120 0
Nostoc_sp._PCC_7524 0
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 1
Paenibacillus_mucilaginosus_3016 1
Bacillus_atrophaeus_1942 1
Runella_slithyformis_DSM_19594 1
Zunongwangia_profunda_SM-A87 1
Croceibacter_atlanticus_HTCC2559 1
Zobellia_galactanivorans 1
Desulfurispirillum_indicum_S5 1
Granulicella_mallensis_MP5ACTX8 1
Haliangium_ochraceum_DSM_14365 0
Sorangium_cellulosum_'So_ce_56' 0
Stigmatella_aurantiaca_DW4/3-1 0
Burkholderia_xenovorans_LB400 0
Ralstonia_eutropha_JMP134 0
Polaromonas_naphthalenivorans_CJ2 0
Ruegeria_sp._TM1040 1
Nitrosococcus_halophilus_Nc4 0
Pseudomonas_sp._VLB120 0

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Strains
Genome     Number
Chamaesiphon_minutus_PCC_6605 0
Crinalium_epipsammum_PCC_9333 0
Oscillatoria_nigro-viridis_PCC_7112 0
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 1
Anabaena_cylindrica_PCC_7122 0
Paenibacillus_mucilaginosus_KNP414 1
Paenibacillus_mucilaginosus_K02 1
Bacillus_megaterium_WSH-002 1
Bacillus_megaterium_QM_B1551 1
Burkholderia_phenoliruptrix_BR3459a 0
Hyphomicrobium_nitrativorans_NL23 0
Pseudomonas_monteilii_SB3101 0
Pseudomonas_monteilii_SB3078 0
Pseudomonas_putida_H8234 0
Pseudomonas_putida_DOT-T1E 0
Pseudomonas_putida_GB-1 0

Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 0
STRING_v9.0.5_(STRING) 4
Uniprot_2018_03_genome 5215
NCBI_2017_08_genome 226

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