SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain combinations for 53720,53720,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

53720 - ALDH-like
53720 - ALDH-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Microcebus_murinus_76_1   (Gray mouse lemur)   1
Ochotona_princeps_76   (American pika)   1
Sorex_araneus_76_1   (European shrew)   1
Erinaceus_europaeus_76   (Western European hedgehog)   1
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   1
Drosophila_willistoni_1.3 1
Drosophila_persimilis_1.3 1
Drosophila_virilis_1.2 1
Drosophila_mojavensis_1.3 1
Pisolithus_microcarpus_441_v1.0 1
Fragaria_vesca_   (Wild strawberry)   2
Malus_domestica_v196   (Apple)   0
Vitis_vinifera_   (Wine grape)   0
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   1
Sorghum_bicolor_   (Sorghum)   0
Musa_balbisiana   (Balbis banana)   0
Thecamonas_trahens_ATCC_50062_ 0
Bigelowiella_natans_CCMP2755_22 0
Neospora_caninum 1
Klebsiella_variicola_At-22 1
Klebsiella_pneumoniae_NTUH-K2044 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number
Neospora_caninum_Nc-Liverpool_6.2 1
Klebsiella_pneumoniae_JM45 1
Klebsiella_pneumoniae_CG43 1
Klebsiella_pneumoniae_KCTC_2242 1
Klebsiella_pneumoniae_342 1
Klebsiella_pneumoniae_subsp._pneumoniae_1084 1
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 1
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 1

Longest transcript per gene
Genome     Number
Microcebus_murinus_69_1   (Gray mouse lemur)   1
Ochotona_princeps_69   (American pika)   1
Sorex_araneus_69_1   (European shrew)   1
Erinaceus_europaeus_69   (Western European hedgehog)   1
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   1

Others
Genome     Number
Malus_x_domestica_(Duplicate)   (Apple)   0
Nicotiana_benthamiana_0.4.4_(Early_draft) 1
STRING_v9.0.5_(STRING) 6
Uniprot_2018_03_genome 555
NCBI_2017_08_genome 2711

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]