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Domain combinations for 53822,81324,53850 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

53822 - Periplasmic binding protein-like I
81324 - Voltage-gated potassium channels
53850 - Periplasmic binding protein-like II

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Gorilla_gorilla_76_3.1   (Western gorilla)   0
Saccoglossus_kowalevskii_v3.0 1
Gadus_morhua_76_1   (Atlantic cod)   0
Poecilia_formosa_76   (Amazon molly)   0
Adineta_vaga 0
Octopus_bimaculoides_280 1
Crassostrea_gigas_22   (Pacific oyster)   1
Capitella_sp._I_ 0
Danaus_plexippus_OGS1.0   (Monarch butterfly)   0
Solenopsis_invicta_v.2.2.3   (Red fire ant)   1
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   0
Drosophila_sechellia_1.3 1
Daphnia_pulex_   (Common water flea)   0
Tetranychus_urticae_   (Two-spotted spider mite)   0
Caenorhabditis_brenneri_ 0
Caenorhabditis_remanei_ 0
Caenorhabditis_elegans_76_235   (Roundworm)   2
Caenorhabditis_briggsae_2 0
Trichinella_spiralis_22 1
Schistosoma_mansoni_ 0
Acropora_digitifera_v1.0 2
Malus_domestica_v196   (Apple)   0

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Strains
Genome     Number
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   1
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   2
Hordeum_vulgare_22   (Domesticated barley)   5
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0

Longest transcript per gene
Genome     Number
Felis_catus_69   (Domestic cat)   0
Gadus_morhua_69_1   (Atlantic cod)   0
Caenorhabditis_elegans_69_215   (Roundworm)   1

Others
Genome     Number
Malus_x_domestica_(Duplicate)   (Apple)   0
Uniprot_2018_03_genome 216
NCBI_2017_08_genome 65
STRING_v9.0.5_(STRING) 2

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