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Domain combinations for 54184,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

54184 - Penicillin-binding protein 2x (pbp-2x), c-terminal domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Plasmodium_chabaudi_ 0
Thermobaculum_terrenum_ATCC_BAA-798 0
Thermobispora_bispora_DSM_43833 0
Acidothermus_cellulolyticus_11B 0
Stackebrandtia_nassauensis_DSM_44728 0
Thermobifida_fusca_YX 0
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 0
Thermomonospora_curvata_DSM_43183 0
Streptosporangium_roseum_DSM_43021 0
Streptomyces_coelicolor_A3(2) 0
Streptomyces_bingchenggensis_BCW-1 0
Streptomyces_violaceusniger_Tu_4113 0
Streptomyces_avermitilis_MA-4680 0
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Streptomyces_scabiei_87.22 0
Pseudonocardia_dioxanivorans_CB1190 0
Saccharopolyspora_erythraea_NRRL_2338 0
Kribbella_flavida_DSM_17836 0
Nocardioides_sp._JS614 0
Salinispora_arenicola_CNS-205 0
Verrucosispora_maris_AB-18-032 0
Micromonospora_sp._L5 0
Micromonospora_aurantiaca_ATCC_27029 0
Actinoplanes_sp._N902-109 0
Actinoplanes_missouriensis_431 0
Gordonia_polyisoprenivorans_VH2 0
Corynebacterium_aurimucosum_ATCC_700975 0
Corynebacterium_kroppenstedtii_DSM_44385 0
Corynebacterium_urealyticum_DSM_7109 0
Corynebacterium_jeikeium_K411 0
Corynebacterium_variabile_DSM_44702 0
Tropheryma_whipplei_TW08/27 0
Kytococcus_sedentarius_DSM_20547 0
Arthrobacter_sp._FB24 0
Bifidobacterium_bifidum_S17 0
Marinithermus_hydrothermalis_DSM_14884 0
Meiothermus_silvanus_DSM_9946 0
Meiothermus_ruber_DSM_1279 0
Thermus_sp._CCB_US3_UF1 0
Thermus_scotoductus_SA-01 0
Finegoldia_magna_ATCC_29328 0
Veillonella_parvula_DSM_2008 0
Megasphaera_elsdenii_DSM_20460 0
Acidaminococcus_intestini_RyC-MR95 0
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 0
Ethanoligenens_harbinense_YUAN-3 0
Ruminococcus_albus_7 0
Sulfobacillus_acidophilus_DSM_10332 0
Oscillibacter_valericigenes_Sjm18-20 0
Candidatus_Desulforudis_audaxviator_MP104C 0
Thermincola_potens_JR 0
Desulfosporosinus_acidiphilus_SJ4 0
Desulfosporosinus_orientis_DSM_765 0
Dehalobacter_sp._DCA 0
Dehalobacter_sp._CF 0
Syntrophobotulus_glycolicus_DSM_8271 0
Desulfitobacterium_hafniense_Y51 0
Desulfitobacterium_dehalogenans_ATCC_51507 0
Acetobacterium_woodii_DSM_1030 0
Eubacterium_eligens_ATCC_27750 0
Eubacterium_limosum_KIST612 0
Filifactor_alocis_ATCC_35896 0
Clostridium_lentocellum_DSM_5427 0
[Ruminococcus]_torques 0
Roseburia_hominis_A2-183 0
Roseburia_intestinalis 0
Syntrophothermus_lipocalidus_DSM_12680 0
Clostridium_novyi_NT 0
Clostridium_ljungdahlii_DSM_13528 0
Clostridium_kluyveri_DSM_555 0
Clostridium_beijerinckii_NCIMB_8052 0
Clostridium_perfringens_ATCC_13124 0
Clostridium_botulinum_A_str._ATCC_3502 0
Caldicellulosiruptor_obsidiansis_OB47 0
Caldicellulosiruptor_kronotskyensis_2002 0
Caldicellulosiruptor_hydrothermalis_108 0
Caldicellulosiruptor_owensensis_OL 0
Caldicellulosiruptor_lactoaceticus_6A 0
Caldicellulosiruptor_kristjanssonii_177R1B 0
Caldicellulosiruptor_saccharolyticus_DSM_8903 0
Caldicellulosiruptor_bescii_DSM_6725 0
Thermoanaerobacterium_xylanolyticum_LX-11 0
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 0
Thermoanaerobacter_tengcongensis_MB4 0
Carboxydothermus_hydrogenoformans_Z-2901 0
Ammonifex_degensii_KC4 0
Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 0
Thermoanaerobacter_pseudethanolicus_ATCC_33223 0
Thermoanaerobacter_sp._X514 0
Thermoanaerobacter_italicus_Ab9 0
Thermoanaerobacter_wiegelii_Rt8.B1 0
Thermoanaerobacter_brockii_subsp._finnii_Ako-1 0
Carnobacterium_sp._WN1359 0
Lactobacillus_crispatus_ST1 0
Lactobacillus_amylovorus_GRL1118 0
Lactobacillus_helveticus_DPC_4571 0
Lactobacillus_acidophilus_30SC 0
Exiguobacterium_sp._AT1b 0
Exiguobacterium_sibiricum_255-15 0
Brevibacillus_brevis_NBRC_100599 0
Paenibacillus_sp._JDR-2 0
Paenibacillus_terrae_HPL-003 0
Paenibacillus_mucilaginosus_3016 0
Paenibacillus_polymyxa_M1 0
Listeria_welshimeri_serovar_6b_str._SLCC5334 0
Listeria_innocua_Clip11262 0
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 0
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 0
Listeria_ivanovii_subsp._ivanovii_PAM_55 0
Anoxybacillus_flavithermus_WK1 0
Geobacillus_sp._GHH01 0
Geobacillus_thermodenitrificans_NG80-2 0
Bacillus_pseudofirmus_OF4 0
Bacillus_clausii_KSM-K16 0
Macrococcus_caseolyticus_JCSC5402 0
Staphylococcus_lugdunensis_HKU09-01 0
Staphylococcus_haemolyticus_JCSC1435 0
Staphylococcus_epidermidis_RP62A 0
Candidatus_Cloacamonas_acidaminovorans 0
Melioribacter_roseus_P3M 0
Pelodictyon_phaeoclathratiforme_BU-1 0
Chlorobium_luteolum_DSM_273 0
Chlorobium_phaeobacteroides_DSM_266 1
Chlorobaculum_parvum_NCIB_8327 0
Chlorobium_tepidum_TLS 0
Saprospira_grandis_str._Lewin 0
Niastella_koreensis_GR20-10 0
Chitinophaga_pinensis_DSM_2588 0
Candidatus_Amoebophilus_asiaticus_5a2 0
Belliella_baltica_DSM_15883 0
Cyclobacterium_marinum_DSM_745 0
Cytophaga_hutchinsonii_ATCC_33406 0
Runella_slithyformis_DSM_19594 0
Parabacteroides_distasonis_ATCC_8503 0
Tannerella_forsythia_ATCC_43037 0
Candidatus_Azobacteroides_pseudotrichonymphae_genomovar._CFP2 0
Bacteroides_sp._CF50 0
Prevotella_intermedia_17 0
Prevotella_denticola_F0289 0
Prevotella_ruminicola_23 0
Porphyromonas_asaccharolytica_DSM_20707 0
Porphyromonas_gingivalis_ATCC_33277 0
Alistipes_finegoldii_DSM_17242 0
Bacteroides_helcogenes_P_36-108 0
Bacteroides_vulgatus_ATCC_8482 0
Bacteroides_thetaiotaomicron_VPI-5482 0
Bacteroides_fragilis_YCH46 0
Zunongwangia_profunda_SM-A87 1
Lacinutrix_sp._5H-3-7-4 0
Aequorivita_sublithincola_DSM_14238 0
Polaribacter_sp._MED152 0
Capnocytophaga_canimorsus_Cc5 0
Flavobacterium_columnare_ATCC_49512 0
Thermovirga_lienii_DSM_17291 0
Aminobacterium_colombiense_DSM_12261 0
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 0
Leptospira_interrogans_serovar_Lai_str._IPAV 0
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 0
Marinitoga_piezophila_KA3 0
Petrotoga_mobilis_SJ95 0
Fervidobacterium_pennivorans_DSM_9078 0
Fervidobacterium_nodosum_Rt17-B1 0
Thermotoga_lettingae_TMO 0
Thermotoga_sp._RQ2 1
Thermotoga_maritima_MSB8 1
Elusimicrobium_minutum_Pei191 0
uncultured_Termite_group_1_bacterium_phylotype_Rs-D17 0
Terriglobus_saanensis_SP1PR4 0
Thermodesulfovibrio_yellowstonii_DSM_11347 1
Sebaldella_termitidis_ATCC_33386 0
Leptotrichia_buccalis_C-1013-b 0
Ilyobacter_polytropus_DSM_2926 0
Candidatus_Methylomirabilis_oxyfera 0
methanocaldococcus_infernus_ME 0

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Strains
Genome     Number
Gordonibacter_pamelaeae_7-10-1-b 0
Adlercreutzia_equolifaciens_DSM_19450 0
Streptomyces_albus_J1074 0
Streptomyces_rapamycinicus_NRRL_5491 0
Streptomyces_davawensis_JCM_4913 0
Streptomyces_venezuelae_ATCC_10712 0
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Saccharothrix_espanaensis_DSM_44229 0
Propionibacterium_avidum_44067 0
Actinoplanes_friuliensis_DSM_7358 0
Corynebacterium_maris_DSM_45190 0
Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 0
Corynebacterium_urealyticum_DSM_7111 0
Corynebacterium_argentoratense_DSM_44202 0
Tropheryma_whipplei_str._Twist 0
Bifidobacterium_thermophilum_RBL67 0
Bifidobacterium_bifidum_PRL2010 0
Bifidobacterium_bifidum_BGN4 0
Thermus_oshimai_JL-2 0
Thermus_thermophilus_SG0.5JP17-16 0
Thermus_thermophilus_HB8 0
Ruminococcus_champanellensis_18P13 0
Sulfobacillus_acidophilus_TPY 0
Clostridium_acidurici_9a 0
Desulfosporosinus_meridiei_DSM_13257 0
Desulfitobacterium_dichloroeliminans_LMG_P-21439 0
Desulfitobacterium_hafniense_DCB-2 0
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 0
Coprococcus_catus_GD/7 0
Roseburia_intestinalis_XB6B4 0
Clostridium_sp._SY8519 0
Clostridium_saccharobutylicum_DSM_13864 0
Clostridium_autoethanogenum_DSM_10061 0
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 0
Clostridium_kluyveri_NBRC_12016 0
Clostridium_perfringens_SM101 0
Clostridium_botulinum_H04402_065 0
Clostridium_botulinum_BKT015925 0
Clostridium_botulinum_F_str._230613 0
Clostridium_botulinum_F_str._Langeland 0
Clostridium_botulinum_E3_str._Alaska_E43 0
Clostridium_botulinum_B1_str._Okra 0
Clostridium_botulinum_Ba4_str._657 0
Clostridium_botulinum_A2_str._Kyoto 0
Clostridium_botulinum_A3_str._Loch_Maree 0
Clostridium_botulinum_A_str._Hall 0
Clostridium_botulinum_A_str._ATCC_19397 0
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 0
Thermoanaerobacterium_thermosaccharolyticum_M0795 0
Thermacetogenium_phaeum_DSM_12270 0
Thermoanaerobacter_sp._X513 0
Carnobacterium_maltaromaticum_LMA28 0
Enterococcus_mundtii_QU_25 0
Lactobacillus_amylovorus_GRL_1112 0
Lactobacillus_helveticus_CNRZ32 0
Exiguobacterium_antarcticum_B7 0
Thermobacillus_composti_KWC4 0
Paenibacillus_sp._Y412MC10 0
Paenibacillus_mucilaginosus_KNP414 0
Paenibacillus_mucilaginosus_K02 0
Paenibacillus_larvae_subsp._larvae_DSM_25430 0
Paenibacillus_polymyxa_CR1 0
Paenibacillus_polymyxa_SC2 0
Paenibacillus_polymyxa_E681 0
Listeria_monocytogenes_EGD_sequence 0
Listeria_monocytogenes_N53-1 0
Listeria_monocytogenes_La111 0
Listeria_monocytogenes_serotype_4b_str._LL195 0
Listeria_monocytogenes_07PF0776 0
Listeria_monocytogenes_M7 0
Listeria_monocytogenes_J1-220 0
Listeria_monocytogenes_J1816 0
Listeria_monocytogenes_SLCC2376 0
Listeria_monocytogenes_SLCC5850 0
Listeria_monocytogenes_ATCC_19117 0
Listeria_monocytogenes_L312 0
Listeria_monocytogenes_SLCC2479 0
Listeria_monocytogenes_SLCC7179 0
Listeria_monocytogenes_SLCC2540 0
Listeria_monocytogenes_SLCC2378 0
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 0
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 0
Listeria_monocytogenes_serotype_7_str._SLCC2482 0
Listeria_monocytogenes_08-5578 0
Listeria_monocytogenes_08-5923 0
Listeria_monocytogenes_L99 0
Listeria_monocytogenes_HCC23 0
Listeria_monocytogenes_10403S 0
Listeria_monocytogenes_J0161 0
Listeria_monocytogenes_Finland_1998 0
Listeria_monocytogenes_FSL_R2-561 0
Listeria_monocytogenes_serotype_4b_str._F2365 0
Listeria_monocytogenes_EGD-e 0
Geobacillus_sp._C56-T3 0
Geobacillus_sp._Y412MC52 0
Geobacillus_sp._Y412MC61 0
Bacillus_thuringiensis_serovar_finitimus_YBT-020 0
Bacillus_cereus_FRI-35 0
Bacillus_cereus_ATCC_10987 0
Bacillus_coagulans_36D1 0
Staphylococcus_pasteuri_SP1 0
Staphylococcus_lugdunensis_N920143 0
Staphylococcus_warneri_SG1 0
Staphylococcus_epidermidis_ATCC_12228 0
Echinicola_vietnamensis_DSM_17526 0
Emticicia_oligotrophica_DSM_17448 0
Prevotella_sp._oral_taxon_299_str._F0039 0
Prevotella_dentalis_DSM_3688 0
Porphyromonas_gingivalis_TDC60 1
Porphyromonas_gingivalis_W83 0
Alistipes_shahii_WAL_8301 0
Bacteroides_xylanisolvens_XB1A 0
Bacteroides_fragilis_638R 0
Bacteroides_fragilis_NCTC_9343 0
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 0
Leptospira_interrogans_serovar_Lai_str._56601 0
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 0
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 0
Thermotoga_maritima_MSB8 1

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Others
Genome     Number
NCBI_plasmid_sequences_(Plasmids) 0
Protein_Data_Bank_(all_PDB_sequenc) 0
TargetDB__(Targets) 1
STRING_v9.0.5_(STRING) 4
Uniprot_2018_03_genome 222
NCBI_2017_08_genome 39
Protozoadb_2010_08_(Protozoadb) 0
NCBI_viral_sequences_(Viral) 0

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