SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain combinations for 54292,47741,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

54292 - 2Fe-2S ferredoxin-like
47741 - CO dehydrogenase ISP C-domain like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Mus_musculus_76_38   (House mouse)   1
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   0
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   0
Atta_cephalotes_v1.1 0
Tribolium_castaneum_3.0   (Red flour beetle)   0
Caenorhabditis_japonica_ 0
Caenorhabditis_brenneri_ 0
Capsaspora_owczarzaki_ATCC_30864_ 0
Sporisorium_reilianum_22 0
Ustilago_maydis_ 0
Microbotryum_violaceum_22 0
Daldinia_eschscholzii_EC12_v1.0 0
Botrytis_cinerea_B05.10_ 0
Didymella_exigua_CBS_183.55_v1.0 0
Leptosphaeria_maculans_22 0
Setosphaeria_turcica_v1.0 0
Cochliobolus_miyabeanus_ATCC_44560_v1.0 0
Cochliobolus_victoriae_FI3_v1.0 0
Cochliobolus_carbonum_26-R-13_v1.0 0
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   0
Alternaria_brassicicola_ 0
Cochliobolus_lunatus_m118_v2.0 0
Pyrenophora_teres_f._teres_22 0
Pyrenophora_tritici-repentis_ 0
Stagonospora_nodorum_ 0
Ajellomyces_dermatitidis_SLH14081_ 0
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 0
Aspergillus_glaucus 0
Volvox_carteri_f._nagariensis_ 0
Volvox_carteri_v199 0
Chlamydomonas_reinhardtii_4.0 0
Ectocarpus_siliculosus 0
Pythium_iwayamai_DAOM_BR242034_22 0
Pythium_arrhenomanes_ATCC_12531_22 0
Pythium_ultimum_v1.7-2 0
Pythium_aphanidermatum_DAOM_BR444_22 0
Pythium_irregulare_DAOM_BR486_22 0
Naegleria_gruberi_ 0
Kitasatospora_setae_KM-6054 1
Streptomyces_scabiei_87.22 0
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 0
Thermaerobacter_marianensis_DSM_12885 1
Psychrobacter_sp._PRwf-1 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number
Paracoccidioides_brasiliensis_Pb03_ 0
Ajellomyces_dermatitidis_ER-3_ 0
Histoplasma_capsulatum_H88 0
Histoplasma_capsulatum_G186AR 0
Streptomyces_albus_J1074 0
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 0

Longest transcript per gene
Genome     Number
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   0

Others
Genome     Number
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   1
Protein_Data_Bank_(all_PDB_sequenc) 3
STRING_v9.0.5_(STRING) 1
NCBI_2017_08_genome 33
Uniprot_2018_03_genome 216

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]