SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain combinations for 54695,_gap_,57667,57667,57667,57667,57667,_gap_,57667,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

54695 - POZ domain
57667 - beta-beta-alpha zinc fingers
57667 - beta-beta-alpha zinc fingers
57667 - beta-beta-alpha zinc fingers
57667 - beta-beta-alpha zinc fingers
57667 - beta-beta-alpha zinc fingers
57667 - beta-beta-alpha zinc fingers

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Jump to [ Top of page · Domain combinations in individual genomes ]

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   1
Papio_anubis_76   (Olive baboon)   1
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   0
Sus_scrofa_76_10.2   (Pig)   1
Equus_caballus_76_2   (Horse)   2
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1
Ornithorhynchus_anatinus_76_5   (Platypus)   1
Latimeria_chalumnae_76_1   (Coelacanth)   2

Longest transcript per gene
Genome     Number
Sus_scrofa_69_10.2   (Pig)   1
Equus_caballus_69_2   (Horse)   1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1
Ornithorhynchus_anatinus_69_5   (Platypus)   1
Latimeria_chalumnae_69_1   (Coelacanth)   1

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   1
STRING_v9.0.5_(STRING) 1
Uniprot_2018_03_genome 1560
NCBI_2017_08_genome 81

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]