SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 54928 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

54928 - RNA-binding domain, RBD

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   155
Pan_troglodytes_76_2.1.4   (Chimpanzee)   6
Gorilla_gorilla_76_3.1   (Western gorilla)   5
Pongo_abelii_76_2   (Sumatran orangutan)   8
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   6
Papio_anubis_76   (Olive baboon)   3
Macaca_mulatta_76_1   (Rhesus monkey)   15
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   12
Otolemur_garnettii_76_3   (Small-eared galago)   2
Microcebus_murinus_76_1   (Gray mouse lemur)   7
Rattus_norvegicus_76_5.0   (Norway rat)   7
Mus_musculus_76_38   (House mouse)   64
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   5
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   5
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   14
Cavia_porcellus_76_3   (Domestic guinea pig)   5
Oryctolagus_cuniculus_76_2   (Rabbit)   3
Ochotona_princeps_76   (American pika)   6
Tupaia_belangeri_76   (Northern tree shrew)   5
Sus_scrofa_76_10.2   (Pig)   18
Bos_taurus_76_3.1   (Cattle)   4
Ovis_aries_76_3.1   (Sheep)   7
Vicugna_pacos_76_1   (Alpaca)   4
Tursiops_truncatus_76_1   (Bottlenose dolphin)   5
Mustela_putorius_furo_76_1.0   (Domestic ferret)   3
Ailuropoda_melanoleuca_76_1   (Giant panda)   9
Canis_familiaris_76_3.1   (Dog)   6
Felis_catus_76_6.2   (Domestic cat)   6
Equus_caballus_76_2   (Horse)   6
Myotis_lucifugus_76_2.0   (Little brown bat)   6
Pteropus_vampyrus_76_1   (Large flying fox)   5
Sorex_araneus_76_1   (European shrew)   5
Erinaceus_europaeus_76   (Western European hedgehog)   3
Procavia_capensis_76_1   (Cape rock hyrax)   7
Loxodonta_africana_76_3   (African savanna elephant)   3
Echinops_telfairi_76   (Small Madagascar hedgehog)   5
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   11
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   6
Macropus_eugenii_76_1.0   (Tammar wallaby)   5
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   8
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   7
Ornithorhynchus_anatinus_76_5   (Platypus)   16
Saccoglossus_kowalevskii_v3.0 12
Petromyzon_marinus_76_7.0   (Sea lamprey)   9
Meleagris_gallopavo_76_2   (Turkey)   4
Gallus_gallus_76_4   (Chicken)   4
Anas_platyrhynchos_76_1.0   (Mallard)   13
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   12
Ficedula_albicollis_76_1.0   (Collared flycatcher)   5
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   7
Anolis_carolinensis_76_2.0   (Green anole)   5
Xenopus_laevis_   (African clawed frog)   12
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   4
Latimeria_chalumnae_76_1   (Coelacanth)   13
Lepisosteus_oculatus_76   (Spotted gar)   4
Gadus_morhua_76_1   (Atlantic cod)   11
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   5
Takifugu_rubripes_76_4   (Torafugu)   4
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   7
Oryzias_latipes_76_1   (Japanese medaka)   14
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   4
Poecilia_formosa_76   (Amazon molly)   6
Oreochromis_niloticus_76_1.0   (Nile tilapia)   4
Astyanax_mexicanus_76   (Mexican tetra)   9
Danio_rerio_76_9   (Zebrafish)   30
Oikopleura_dioica 5
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   7
Ciona_intestinalis_76   (Vase tunicate)   5
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   14
Adineta_vaga 42
Octopus_bimaculoides_280 17
Crassostrea_gigas_22   (Pacific oyster)   2
Lottia_gigantea_   (Owl limpet)   25
Helobdella_robusta_ 40
Capitella_sp._I_ 18
Danaus_plexippus_OGS1.0   (Monarch butterfly)   13
Heliconius_melpomene_   (Postman butterfly)   5
Bombyx_mori_   (Domestic silkworm)   11
Nasonia_vitripennis_   (Jewel wasp)   5
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   29
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   12
Linepithema_humile_v1.1   (Argentine ant)   16
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   13
Solenopsis_invicta_v.2.2.3   (Red fire ant)   13
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   7
Atta_cephalotes_v1.1 27
Camponotus_floridanus_v3.3   (Florida carpenter ant)   8
Lucilia_cuprina   (Australian sheep blowfly)   4
Drosophila_grimshawi_1.3 5
Drosophila_willistoni_1.3 4
Drosophila_pseudoobscura_2.13 6
Drosophila_persimilis_1.3 8
Drosophila_suzukii 13
Drosophila_yakuba_1.3 7
Drosophila_simulans_1.3 6
Drosophila_sechellia_1.3 10
Drosophila_melanogaster_76_5   (Fruit fly)   9
Drosophila_erecta_1.3 6
Drosophila_ananassae_1.3 7
Drosophila_virilis_1.2 5
Drosophila_mojavensis_1.3 5
Megaselia_scalaris_22 16
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   9
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   12
Anopheles_darlingi_22   (American malaria mosquito)   1
Anopheles_gambiae_49_3j   (African malaria mosquito)   11
Tribolium_castaneum_3.0   (Red flour beetle)   4
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   9
Acyrthosiphon_pisum_   (Pea aphid)   2
Rhodnius_prolixus_22 17
Daphnia_pulex_   (Common water flea)   22
Strigamia_maritima_22 8
Sarcoptes_scabiei 6
Tetranychus_urticae_   (Two-spotted spider mite)   11
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   15
Pristionchus_pacificus_ 22
Meloidogyne_incognita_   (Southern root-knot nematode)   26
Meloidogyne_hapla_ 11
Onchocerca_volvulus_22 6
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   19
Caenorhabditis_japonica_ 9
Caenorhabditis_brenneri_ 10
Caenorhabditis_remanei_ 9
Caenorhabditis_elegans_76_235   (Roundworm)   21
Caenorhabditis_briggsae_2 13
Trichinella_spiralis_22 11
Hymenolepis_microstoma_ 3
Echinococcus_multilocularis_ 5
Echinococcus_granulosus_ 7
Taenia_solium_   (Pork tapeworm)   11
Schistosoma_mansoni_ 11
Mnemiopsis_leidyi   (Sea walnut)   8
Thelohanellus_kitauei 6
Acropora_digitifera_v1.0 23
Nematostella_vectensis_1.0   (Starlet sea anemone)   38
Hydra_vulgaris 5
Amphimedon_queenslandica 11
Trichoplax_adhaerens_ 15
Proterospongia_sp._ATCC_50818_ 3
Monosiga_brevicollis_ 9
Sphaeroforma_arctica_JP610_ 10
Capsaspora_owczarzaki_ATCC_30864_ 3
Conidiobolus_coronatus_NRRL28638_v1.0 8
Mortierella_verticillata_NRRL_6337_ 3
Phycomyces_blakesleeanus_ 15
Rhizopus_oryzae_RA_99-880_ 5
Mucor_circinelloides_ 15
Rhizomucor_miehei_CAU432_ 1
Malassezia_globosa_CBS_7966_ 6
Sporisorium_reilianum_22 2
Ustilago_maydis_ 1
Mixia_osmundae_IAM_14324_v1.0 1
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 3
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 17
Melampsora_laricis-populina_ 13
Rhodotorula_graminis_WP1_v1.0 3
Sporobolomyces_roseus_IAM_13481_ 8
Microbotryum_violaceum_22 2
Wallemia_sebi_v1.0 5
Sphaerobolus_stellatus_v1.0 5
Piloderma_croceum_F_1598_v1.0 7
Serpula_lacrymans_var._lacrymans_S7.9_ 3
Coniophora_puteana 6
Hydnomerulius_pinastri_v2.0 7
Paxillus_rubicundulus_Ve08.2h10_v1.0 2
Pisolithus_microcarpus_441_v1.0 10
Pisolithus_tinctorius_Marx_270_v1.0 6
Scleroderma_citrinum_Foug_A_v1.0 7
Coprinopsis_cinerea_okayama7_130_v3 1
Pleurotus_ostreatus_   (Oyster mushroom)   9
Amanita_thiersii_Skay4041_v1.0 6
Amanita_muscaria_Koide_v1.0   (Fly agaric)   3
Galerina_marginata_v1.0 5
Hebeloma_cylindrosporum_h7_v2.0 6
Laccaria_bicolor_S238N-H82_ 12
Agaricus_bisporus_var._bisporus_ 4
Schizophyllum_commune_ 3
Stereum_hirsutum_FP-91666_SS1__v1.0 2
Heterobasidion_annosum_ 6
Gloeophyllum_trabeumv1.0 2
Punctularia_strigosozonata_v1.0 3
Sebacina_vermifera_MAFF_305830_v1.0 7
Fomitiporia_mediterranea_v1.0 2
Tulasnella_calospora_AL13/4D_v1.0 6
Postia_placenta_ 5
Wolfiporia_cocos_MD-104_SS10__v1.0 1
Fomitopsis_pinicolav1.0 3
Fomitopsis_pinicola_FP-58527_SS1_v3.0 2
Phanerochaete_chrysosporium_RP-78_2.1 6
Dichomitus_squalens 3
Trametes_versicolor_v1.0 6
Tremella_mesenterica_   (Witches' butter)   6
Daldinia_eschscholzii_EC12_v1.0 2
Apiospora_montagnei_NRRL_25634_v1.0 1
Magnaporthe_poae_ATCC_64411_22 3
Magnaporthe_grisea_70-15_ 2
Podospora_anserina_ 0
Sporotrichum_thermophile_ATCC_42464_ 2
Thielavia_terrestris_NRRL_8126_ 1
Chaetomium_globosum_CBS_148.51_ 2
Neurospora_tetrasperma_ 1
Neurospora_discreta_FGSC_8579_ 3
Neurospora_crassa_OR74A_ 2
Cryphonectria_parasitica_   (Chestnut blight fungus)   2
Verticillium_albo-atrum_VaMs.102_ 3
Verticillium_dahliae_VdLs.17_ 3
Acremonium_alcalophilumv_1.0 2
Glomerella_graminicola_22 2
Fusarium_graminearum_ 4
Nectria_haematococca_mpVI_ 2
Fusarium_oxysporum_f._sp._lycopersici_4286_ 7
Fusarium_verticillioides_7600_ 4
Trichoderma_asperellum_CBS_433.97_v1.0 3
Trichoderma_atroviride_ 2
Trichoderma_citrinoviride_v1.0 3
Trichoderma_reesei_1.2 3
Trichoderma_virens_Gv29-8_ 4
Trichoderma_longibrachiatum_ATCC_18648_v1.0 4
Trichoderma_harzianum_CBS_226.95_v1.0 3
Amorphotheca_resinae_v1.0   (Creosote fungus)   2
Botrytis_cinerea_B05.10_ 3
Sclerotinia_sclerotiorum_ 1
Blumeria_graminis_22 3
Didymella_exigua_CBS_183.55_v1.0 2
Leptosphaeria_maculans_22 2
Setosphaeria_turcica_v1.0 4
Cochliobolus_miyabeanus_ATCC_44560_v1.0 4
Cochliobolus_victoriae_FI3_v1.0 4
Cochliobolus_carbonum_26-R-13_v1.0 4
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   3
Alternaria_brassicicola_ 3
Cochliobolus_lunatus_m118_v2.0 3
Pyrenophora_teres_f._teres_22 2
Pyrenophora_tritici-repentis_ 2
Stagonospora_nodorum_ 3
Mycosphaerella_graminicola_IPO323_ 7
Zasmidium_cellare_ATCC_36951_v1.0 5
Dothistroma_septosporum 5
Septoria_musiva_v1.0 3
Mycosphaerella_fijiensis_CIRAD86_ 5
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 3
Paracoccidioides_brasiliensis_Pb18_ 2
Coccidioides_posadasii_RMSCC_3488_ 3
Coccidioides_immitis_RS_ 2
Ajellomyces_dermatitidis_SLH14081_ 2
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 2
Microsporum_canis_CBS_113480_ 2
Trichophyton_equinum_CBS_127.97_ 3
Trichophyton_verrucosum_HKI_0517_ 1
Arthroderma_benhamiae_CBS_112371_ 2
Trichophyton_tonsurans_CBS_112818_ 2
Trichophyton_rubrum_CBS_118892_ 2
Uncinocarpus_reesii_1704_ 2
Aspergillus_zonatus_v1.0 2
Penicillium_chrysogenum_Wisconsin_54-1255_ 3
Penicillium_chrysogenum_v1.0 3
Aspergillus_acidus_v1.0 3
Aspergillus_fumigatus_Af293 3
Aspergillus_brasiliensis_v1.0 4
Aspergillus_nidulans_FGSC_A4_ 4
Aspergillus_sydowii_v1.0 5
Aspergillus_versicolor_v1.0 4
Aspergillus_glaucus 3
Aspergillus_carbonarius_ITEM_5010_ 2
Neosartorya_fischeri_NRRL_181_ 3
Aspergillus_terreus_NIH2624_ 2
Aspergillus_tubingensis_v1.0 3
Aspergillus_wentii_v1.0 3
Aspergillus_oryzae_RIB40_ 4
Aspergillus_niger_22 3
Aspergillus_niger_ATCC_1015_ 1
Aspergillus_flavus_NRRL3357_ 3
Aspergillus_clavatus_NRRL_1_ 2
Penicillium_marneffei_ATCC_18224_ 2
Tuber_melanosporum_Mel28_22 5
Tuber_melanosporum_Vittad_   (Perigord truffle)   5
Hansenula_polymorpha_v2.0 4
Dekkera_bruxellensis_CBS_2499_v2.0 6
Pichia_membranifaciensv1.0 5
Candida_tanzawaensis_NRRL_Y-17324__v1.0 3
Candida_dubliniensis_CD36_ 3
Candida_tropicalis_MYA-3404_ 3
Candida_parapsilosis_ 1
Candida_albicans_SC5314 3
Lodderomyces_elongisporus_NRRL_YB-4239_ 1
Babjeviella_inositovora_NRRL_Y-12698_v1.0 1
Pichia_stipitis_CBS_6054_ 2
Candida_guilliermondii_ATCC_6260_ 3
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 3
Debaromyces_hansenii 3
Wickerhamomyces_anomalus 9
Pichia_pastoris_GS115_ 1
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 7
Yarrowia_lipolytica_CLIB122 4
Candida_lusitaniae_ATCC_42720_ 3
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 3
Vanderwaltozyma_polyspora_DSM_70294_ 3
Candida_glabrata_CBS138 2
Kluyveromyces_thermotolerans_CBS_6340 2
Lachancea_kluyveri_ 2
Kluyveromyces_waltii 2
Ashbya_gossypii_ATCC_10895_ 1
Zygosaccharomyces_rouxii_ 1
Saccharomyces_mikatae_MIT 2
Saccharomyces_paradoxus_MIT 2
Saccharomyces_cerevisiae_76   (Baker's yeast)   1
Saccharomyces_bayanus_MIT 2
Kluyveromyces_lactis 1
Schizosaccharomyces_cryophilus_OY26_22 4
Schizosaccharomyces_octosporus_yFS286_ 5
Schizosaccharomyces_japonicus_yFS275_ 4
Schizosaccharomyces_pombe   (Fission yeast)   5
Catenaria_anguillulae_PL171_v1.0 12
Allomyces_macrogynus_ATCC_38327_ 4
Spizellomyces_punctatus_DAOM_BR117_ 3
Dictyostelium_discoideum 6
Dictyostelium_purpureum_ 11
Entamoeba_dispar_1.2 4
Entamoeba_invadens_1.2 3
Entamoeba_histolytica_1 5
Selaginella_moellendorffii_ 51
Pinus_taeda   (Loblolly pine)   48
Picea_abies   (Norway spruce)   22
Eucalyptus_grandis_v201   (Rose gum)   30
Theobroma_cacao_B97-61/B2_v1   (Cacao)   48
Gossypium_raimondii_v221 41
Citrus_clementina_v165 25
Citrus_sinensis_v154   (Sweet orange)   32
Thellungiella_halophila_v173 13
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   27
Capsella_rubella_v183 17
Arabidopsis_lyrata_   (Lyrate rockcress)   30
Arabidopsis_thaliana_10   (Thale cress)   28
Carica_papaya_   (Papaya)   14
Medicago_truncatula_   (Barrel medic)   35
Phaseolus_vulgaris_v186   (French bean)   14
Glycine_max_v109   (Soybean)   34
Cucumis_sativus_v122   (Cucumber)   12
Fragaria_vesca_   (Wild strawberry)   11
Malus_domestica_v196   (Apple)   28
Prunus_persica_v139   (Peach)   35
Linum_usitatissimum_v200   (Flax)   17
Manihot_esculenta_v147   (Cassava)   19
Populus_trichocarpa_v156   (Black cottonwood)   27
Vitis_vinifera_   (Wine grape)   23
Mimulus_guttatus_v140   (Spotted monkey flower)   18
Solanum_lycopersicum_v.2.3   (Tomato)   23
Solanum_tuberosum_   (Potato)   42
Actinidia_chinensis_Hongyang_ 15
Aquilegia_coerulea_v195 19
Triticum_urartu_22 19
Triticum_aestivum_22   (Bread wheat)   104
Aegilops_tauschii_22 10
Brachypodium_distachyon_   (Stiff brome)   13
Oryza_barthii_22   (African wild rice)   19
Oryza_meridionalis_22 18
Oryza_glumaepatula_22 22
Oryza_glaberrima   (African rice)   14
Oryza_punctata_22 19
Oryza_nivara_22 22
Oryza_brachyantha_22   (Malo sina)   13
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   27
Oryza_sativa_v193   (Rice)   25
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   16
Panicum_virgatum_v202   (Switchgrass)   43
Setaria_italica_v164   (Foxtail millet)   12
Zea_mays_subsp._mays_   (Maize)   40
Zea_mays_v181   (Maize)   43
Sorghum_bicolor_   (Sorghum)   15
Musa_balbisiana   (Balbis banana)   20
Musa_acuminata_22   (Wild Malaysian banana)   26
Amborella_trichopoda_22 12
Physcomitrella_patens 31
Coccomyxa_subellipsoidea_sp._C-169_v2 9
Asterochloris_sp._Cgr/DA1pho_v1.0 15
Chlorella_variabilis_sp._NC64A_ 14
Chlorella_vulgaris_ 9
Volvox_carteri_f._nagariensis_ 9
Volvox_carteri_v199 4
Chlamydomonas_reinhardtii_4.0 13
Ostreococcus_sp._RCC809_ 15
Ostreococcus_lucimarinus_CCE9901_ 9
Ostreococcus_tauri_ 8
Bathycoccus_prasinos_ 2
Micromonas_sp._RCC299_ 12
Micromonas_pusilla_CCMP1545_v3.0 12
Cyanidioschyzon_merolae_strain_10D_22 2
Cyanidioschyzon_merolae 3
Porphyridium_purpureum_02_2012 0
Thecamonas_trahens_ATCC_50062_ 4
Bigelowiella_natans_CCMP2755_22 20
Giardia_lamblia_2.3 2
Cyanophora_paradoxa_ 16
Leishmania_mexicana_2.4 4
Leishmania_major_strain_Friedlin_ 3
Leishmania_infantum_JPCM5_2.4 3
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 4
Trypanosoma_vivax_ 8
Trypanosoma_cruzi_strain_CL_Brener 7
Trypanosoma_congolense_2.4 4
Trypanosoma_brucei_gambiense_v4.1 4
Trypanosoma_brucei_TREU927_v4.1 5
Ectocarpus_siliculosus 5
Aureococcus_anophagefferens_ 27
Albugo_laibachii_22 5
Pythium_iwayamai_DAOM_BR242034_22 9
Pythium_arrhenomanes_ATCC_12531_22 6
Pythium_ultimum_v1.7-2 11
Pythium_aphanidermatum_DAOM_BR444_22 5
Pythium_irregulare_DAOM_BR486_22 6
Pythium_vexans_DAOM_BR484_22 10
Phytophthora_ramorum_1.1   (Sudden oak death agent)   8
Phytophthora_sojae_1.1 5
Phytophthora_infestans_T30-4_ 7
Phytophthora_capsici_ 7
Hyaloperonospora_arabidopsidis_22 3
Phaeodactylum_tricornutumCCAP_1055/1 19
Fragilariopsis_cylindrus 35
Thalassiosira_pseudonana_CCMP1335 14
Perkinsus_marinus_ATCC_50983_ 32
Paramecium_tetraurelia_ 15
Tetrahymena_thermophila_SB210_1_ 5
Ichthyophthirius_multifiliis_strain_G5_ 4
Cryptosporidium_hominis 2
Cryptosporidium_muris 3
Cryptosporidium_parvum_Iowa_II 3
Neospora_caninum 1
Toxoplasma_gondii_VEG 2
Toxoplasma_gondii_ME49 2
Toxoplasma_gondii_GT1 2
Babesia_bovis_T2Bo_ 18
Theileria_parva__ 7
Theileria_annulata 4
Plasmodium_falciparum_3D7_ 6
Plasmodium_vivax_SaI-1_7.0 6
Plasmodium_knowlesi_strain_H_ 5
Plasmodium_yoelii_ssp._yoelii_1_ 10
Plasmodium_chabaudi_ 6
Plasmodium_berghei_ANKA_ 6
Symbiodinium_minutum_clade_B1_v1.2 19
Naegleria_gruberi_ 6
Trichomonas_vaginalis_ 20
Guillardia_theta_CCMP2712_v1.0_ 23
Emiliania_huxleyi_CCMP1516_ 36
Leptolyngbya_sp._PCC_7376 2
Pseudanabaena_sp._PCC_7367 2
Acaryochloris_marina_MBIC11017 11
Synechocystis_sp._PCC_6803 2
Thermosynechococcus_sp._NK55 2
Thermosynechococcus_elongatus_BP-1 2
Synechococcus_sp._PCC_7502 2
Synechococcus_sp._PCC_6312 3
Synechococcus_sp._CC9311 0
Synechococcus_elongatus_PCC_7942 2
Prochlorococcus_marinus_str._MIT_9515 1
Microcoleus_sp._PCC_7113 7
Trichodesmium_erythraeum_IMS101 4
Geitlerinema_sp._PCC_7407 5
Cyanothece_sp._PCC_8802 3
Gloeocapsa_sp._PCC_7428 5
cyanobacterium_UCYN-A 3
Halothece_sp._PCC_7418 3
Microcystis_aeruginosa_NIES-843 2
Gloeobacter_violaceus_PCC_7421 3
Rivularia_sp._PCC_7116 5
Calothrix_sp._PCC_7507 5
Anabaena_variabilis_ATCC_29413 7
'Nostoc_azollae'_0708 4
Nostoc_sp._PCC_7107 5
Nostoc_punctiforme_PCC_73102 4
Nostoc_sp._PCC_7120 7
Nostoc_sp._PCC_7524 6
Anabaena_sp._90 4
Mycoplasma_synoviae_53 0
Frankia_symbiont_of_Datisca_glomerata 0
Frankia_sp._EAN1pec 0
Thermobifida_fusca_YX 0
Streptomyces_violaceusniger_Tu_4113 1
Streptomyces_avermitilis_MA-4680 0
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 1
Dehalogenimonas_lykanthroporepellens_BL-DC-9 1
Anaerolinea_thermophila_UNI-1 1
Sphaerobacter_thermophilus_DSM_20745 0
Chloroflexus_sp._MS-G 2
Chloroflexus_sp._Y-400-fl 2
Chloroflexus_aggregans_DSM_9485 2
Chloroflexus_aurantiacus_J-10-fl 2
Megamonas_hypermegale 0
Erysipelothrix_rhusiopathiae_str._Fujisawa 0
Symbiobacterium_thermophilum_IAM_14863 5
Sulfobacillus_acidophilus_DSM_10332 1
Candidatus_Desulforudis_audaxviator_MP104C 1
Thermincola_potens_JR 0
Pelotomaculum_thermopropionicum_SI 1
Desulfosporosinus_acidiphilus_SJ4 1
Desulfosporosinus_orientis_DSM_765 1
Dehalobacter_sp._DCA 1
Dehalobacter_sp._CF 1
Syntrophobotulus_glycolicus_DSM_8271 1
Desulfitobacterium_hafniense_Y51 0
Desulfitobacterium_dehalogenans_ATCC_51507 1
Desulfotomaculum_reducens_MI-1 1
Desulfotomaculum_acetoxidans_DSM_771 1
Desulfotomaculum_kuznetsovii_DSM_6115 1
Desulfotomaculum_carboxydivorans_CO-1-SRB 1
Desulfotomaculum_ruminis_DSM_2154 1
Acetobacterium_woodii_DSM_1030 0
Eubacterium_limosum_KIST612 0
Clostridium_sticklandii_DSM_519 0
Heliobacterium_modesticaldum_Ice1 1
Clostridium_sp._BNL1100 0
Clostridium_beijerinckii_NCIMB_8052 0
Clostridium_perfringens_ATCC_13124 0
Thermoanaerobacterium_xylanolyticum_LX-11 0
Carboxydothermus_hydrogenoformans_Z-2901 1
Moorella_thermoacetica_ATCC_39073 1
Ammonifex_degensii_KC4 1
Halothermothrix_orenii_H_168 0
Lactobacillus_kefiranofaciens_ZW3 0
Lactobacillus_gasseri_ATCC_33323 0
Lactobacillus_helveticus_DPC_4571 0
Paenibacillus_polymyxa_M1 0
Listeria_welshimeri_serovar_6b_str._SLCC5334 0
Listeria_innocua_Clip11262 0
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 0
Solibacillus_silvestris_StLB046 0
Geobacillus_kaustophilus_HTA426 0
Bacillus_licheniformis_DSM_13_=_ATCC_14580 0
Bacillus_pseudofirmus_OF4 0
Bacillus_megaterium_DSM_319 0
Bacillus_coagulans_2-6 0
Candidatus_Cloacamonas_acidaminovorans 0
Gemmatimonas_aurantiaca_T-27 0
Ignavibacterium_album_JCM_16511 3
Pelodictyon_phaeoclathratiforme_BU-1 2
Chlorobium_luteolum_DSM_273 2
Chlorobium_chlorochromatii_CaD3 1
Chlorobium_phaeobacteroides_DSM_266 2
Chlorobium_phaeovibrioides_DSM_265 2
Chlorobium_limicola_DSM_245 2
Chlorobaculum_parvum_NCIB_8327 2
Chlorobium_tepidum_TLS 1
Chloroherpeton_thalassium_ATCC_35110 2
Prosthecochloris_aestuarii_DSM_271 2
Haliscomenobacter_hydrossis_DSM_1100 0
Saprospira_grandis_str._Lewin 1
Niastella_koreensis_GR20-10 12
Chitinophaga_pinensis_DSM_2588 3
Salinibacter_ruber_M8 0
Flexibacter_litoralis_DSM_6794 2
Leadbetterella_byssophila_DSM_17132 4
Dyadobacter_fermentans_DSM_18053 0
Cytophaga_hutchinsonii_ATCC_33406 0
Runella_slithyformis_DSM_19594 0
Parabacteroides_distasonis_ATCC_8503 3
Tannerella_forsythia_ATCC_43037 1
Paludibacter_propionicigenes_WB4 2
Odoribacter_splanchnicus_DSM_20712 3
Candidatus_Azobacteroides_pseudotrichonymphae_genomovar._CFP2 1
Bacteroides_sp._CF50 2
Prevotella_melaninogenica_ATCC_25845 0
Prevotella_intermedia_17 0
Prevotella_denticola_F0289 0
Porphyromonas_asaccharolytica_DSM_20707 1
Porphyromonas_gingivalis_ATCC_33277 1
Alistipes_finegoldii_DSM_17242 1
Bacteroides_salanitronis_DSM_18170 0
Bacteroides_helcogenes_P_36-108 2
Bacteroides_vulgatus_ATCC_8482 4
Bacteroides_thetaiotaomicron_VPI-5482 3
Bacteroides_fragilis_YCH46 4
Solitalea_canadensis_DSM_3403 0
Pedobacter_heparinus_DSM_2366 3
Sphingobacterium_sp._21 0
Fluviicola_taffensis_DSM_16823 0
Owenweeksia_hongkongensis_DSM_17368 1
Zunongwangia_profunda_SM-A87 0
Krokinobacter_sp._4H-3-7-5 0
Gramella_forsetii_KT0803 0
Lacinutrix_sp._5H-3-7-4 0
Maribacter_sp._HTCC2170 0
Cellulophaga_algicola_DSM_14237 0
Cellulophaga_lytica_DSM_7489 0
Flavobacteriaceae_bacterium_3519-10 1
Capnocytophaga_ochracea_DSM_7271 0
Flavobacterium_indicum_GPTSA100-9 0
Flavobacterium_psychrophilum_JIP02/86 0
Flavobacterium_branchiophilum_FL-15 1
Flavobacterium_columnare_ATCC_49512 0
Flavobacterium_johnsoniae_UW101 1
Blattabacterium_sp._(Nauphoeta_cinerea) 1
Blattabacterium_sp._(Blattella_germanica)_str._Bge 1
Waddlia_chondrophila_WSU_86-1044 1
Candidatus_Protochlamydia_amoebophila_UWE25 1
Parachlamydia_acanthamoebae_UV-7 1
Simkania_negevensis_Z 1
Phycisphaera_mikurensis_NBRC_102666 1
Isosphaera_pallida_ATCC_43644 1
Planctomyces_limnophilus_DSM_3776 1
Rhodopirellula_baltica_SH_1 0
Pirellula_staleyi_DSM_6068 1
Methylacidiphilum_infernorum_V4 2
Coraliomargarita_akajimensis_DSM_45221 2
Opitutus_terrae_PB90-1 1
Akkermansia_muciniphila_ATCC_BAA-835 0
Turneriella_parva_DSM_21527 1
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 3
Leptospira_interrogans_serovar_Lai_str._IPAV 3
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 4
Spirochaeta_smaragdinae_DSM_11293 3
Sphaerochaeta_pleomorpha_str._Grapes 3
Sphaerochaeta_globus_str._Buddy 3
Sphaerochaeta_coccoides_DSM_17374 1
Spirochaeta_caldaria_DSM_7334 2
Treponema_azotonutricium_ZAS-9 1
Treponema_primitia_ZAS-2 1
Treponema_brennaborense_DSM_12168 1
Treponema_paraluiscuniculi_Cuniculi_A 1
Treponema_succinifaciens_DSM_2489 1
Treponema_pallidum_subsp._pallidum_SS14 2
Treponema_denticola_ATCC_35405 0
Spirochaeta_africana_DSM_8902 2
Spirochaeta_thermophila_DSM_6192 2
Desulfurispirillum_indicum_S5 3
Denitrovibrio_acetiphilus_DSM_12809 3
Hydrogenobacter_thermophilus_TK-6 0
Dictyoglomus_turgidum_DSM_6724 2
Dictyoglomus_thermophilum_H-6-12 2
Candidatus_Chloracidobacterium_thermophilum_B 1
Candidatus_Solibacter_usitatus_Ellin6076 2
Candidatus_Koribacter_versatilis_Ellin345 1
Candidatus_Nitrospira_defluvii 3
Candidatus_Methylomirabilis_oxyfera 1
candidate_division_WWE3_bacterium_RAAC2_WWE3_1 1
candidate_division_SR1_bacterium_RAAC1_SR1_1 1
Candidatus_Saccharibacteria_bacterium_RAAC3_TM7_1 1
Candidatus_Saccharimonas_aalborgensis 2
Bacteriovorax_marinus_SJ 0
Bdellovibrio_bacteriovorus_HD100 3
Nautilia_profundicola_AmH 1
Sulfurospirillum_deleyianum_DSM_6946 1
Sulfurospirillum_barnesii_SES-3 1
Arcobacter_sp._L 1
Arcobacter_nitrofigilis_DSM_7299 1
Arcobacter_butzleri_RM4018 1
Campylobacter_lari_RM2100 0
Campylobacter_curvus_525.92 1
Campylobacter_concisus_13826 1
Campylobacter_sp._03-427 1
Campylobacter_fetus_subsp._fetus_82-40 1
uncultured_Sulfuricurvum_sp._RIFRC-1 1
Sulfuricurvum_kujiense_DSM_16994 1
Helicobacter_cetorum_MIT_00-7128 1
Helicobacter_bizzozeronii_CIII-1 1
Helicobacter_hepaticus_ATCC_51449 1
Helicobacter_felis_ATCC_49179 1
Helicobacter_cinaedi_PAGU611 1
Helicobacter_acinonychis_str._Sheeba 1
Helicobacter_pylori_B38 1
Nitratiruptor_sp._SB155-2 1
Desulfarculus_baarsii_DSM_2075 1
Desulfobacca_acetoxidans_DSM_11109 2
Desulfomonile_tiedjei_DSM_6799 5
Syntrophobacter_fumaroxidans_MPOB 2
Desulfobulbus_propionicus_DSM_2032 1
Desulfohalobium_retbaense_DSM_5692 2
Desulfomicrobium_baculatum_DSM_4028 3
Desulfovibrio_piezophilus 4
Desulfovibrio_aespoeensis_Aspo-2 4
Desulfovibrio_magneticus_RS-1 4
Desulfovibrio_alaskensis_G20 2
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 3
Desulfovibrio_salexigens_DSM_2638 3
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 3
Desulfovibrio_africanus_str._Walvis_Bay 4
Hippea_maritima_DSM_10411 1
Geobacter_daltonii_FRC-32 0
Geobacter_sp._M21 0
Geobacter_uraniireducens_Rf4 1
Geobacter_lovleyi_SZ 1
Geobacter_bemidjiensis_Bem 0
Geobacter_sulfurreducens_KN400 1
Geobacter_metallireducens_GS-15 0
Pelobacter_propionicus_DSM_2379 1
Pelobacter_carbinolicus_DSM_2380 1
Babela_massiliensis 1
Haliangium_ochraceum_DSM_14365 1
Sorangium_cellulosum_'So_ce_56' 3
Anaeromyxobacter_sp._Fw109-5 0
Stigmatella_aurantiaca_DW4/3-1 0
Corallococcus_coralloides_DSM_2259 0
Myxococcus_xanthus_DK_1622 0
Myxococcus_fulvus_HW-1 0
Dechlorosoma_suillum_PS 1
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 2
Methylibium_petroleiphilum_PM1 0
Rubrivivax_gelatinosus_IL144 0
Leptothrix_cholodnii_SP-6 0
Burkholderia_rhizoxinica_HKI_454 0
Burkholderia_phytofirmans_PsJN 0
Burkholderia_phymatum_STM815 1
Burkholderia_xenovorans_LB400 0
Ralstonia_eutropha_JMP134 3
Cupriavidus_taiwanensis_LMG_19424 0
Cupriavidus_metallidurans_CH34 1
Cupriavidus_necator_N-1 0
Ralstonia_eutropha_H16 0
Polynucleobacter_necessarius_subsp._asymbioticus_QLW-P1DMWA-1 0
Burkholderia_sp._RPE64 1
Burkholderia_sp._CCGE1002 0
Burkholderia_gladioli_BSR3 0
Verminephrobacter_eiseniae_EF01-2 1
Alicycliphilus_denitrificans_K601 2
Ramlibacter_tataouinensis_TTB310 1
Delftia_sp._Cs1-4 2
Delftia_acidovorans_SPH-1 2
Polaromonas_sp._JS666 0
Polaromonas_naphthalenivorans_CJ2 0
Variovorax_paradoxus_S110 0
Rhodoferax_ferrireducens_T118 0
Acidovorax_ebreus_TPSY 2
Acidovorax_sp._KKS102 2
Acidovorax_sp._JS42 2
Acidovorax_citrulli_AAC00-1 2
Acidovorax_avenae_subsp._avenae_ATCC_19860 1
Comamonas_testosteroni_CNB-2 1
Taylorella_asinigenitalis_MCE3 0
Achromobacter_xylosoxidans_A8 0
Zymomonas_mobilis_subsp._mobilis_NCIMB_11163 0
Rhodobacter_sphaeroides_ATCC_17029 0
Rhodobacter_capsulatus_SB_1003 0
Sinorhizobium_meliloti_AK83 0
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 0
Saccharophagus_degradans_2-40 1
Oceanimonas_sp._GK1 0
Tolumonas_auensis_DSM_9187 0
Aeromonas_veronii_B565 1
Aeromonas_salmonicida_subsp._salmonicida_A449 1
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 1
Aliivibrio_salmonicida_LFI1238 1
Vibrio_fischeri_MJ11 1
Vibrio_sp._Ex25 2
Vibrio_harveyi_ATCC_BAA-1116 1
Vibrio_parahaemolyticus_RIMD_2210633 1
Vibrio_splendidus_LGP32 1
Vibrio_anguillarum_775 1
Vibrio_furnissii_NCTC_11218 1
Vibrio_vulnificus_MO6-24/O 0
Vibrio_cholerae_O395 0
Photobacterium_profundum_SS9 1
Psychromonas_ingrahamii_37 1
Psychromonas_sp._CNPT3 0
Ferrimonas_balearica_DSM_9799 1
Shewanella_piezotolerans_WP3 0
Shewanella_loihica_PV-4 0
Shewanella_halifaxensis_HAW-EB4 0
Shewanella_sediminis_HAW-EB3 0
Shewanella_denitrificans_OS217 0
Shewanella_pealeana_ATCC_700345 0
Shewanella_oneidensis_MR-1 0
Shewanella_baltica_OS185 0
Shewanella_woodyi_ATCC_51908 0
Shewanella_sp._MR-4 0
Shewanella_amazonensis_SB2B 0
Shewanella_violacea_DSS12 0
Shewanella_frigidimarina_NCIMB_400 0
Shewanella_putrefaciens_CN-32 0
Colwellia_psychrerythraea_34H 1
Pseudoalteromonas_sp._SM9913 1
Pseudoalteromonas_atlantica_T6c 1
Pseudoalteromonas_haloplanktis_TAC125 1
Glaciecola_sp._4H-3-7+YE-5 1
Glaciecola_nitratireducens_FR1064 1
Marinobacter_sp._BSs20148 1
Alteromonas_sp._SN2 1
Alteromonas_macleodii_str._'Deep_ecotype' 1
Kangiella_koreensis_DSM_16069 1
Hahella_chejuensis_KCTC_2396 2
Marinomonas_sp._MWYL1 1
Marinomonas_mediterranea_MMB-1 0
Methylomicrobium_alcaliphilum 0
Methylomonas_methanica_MC09 3
Methylococcus_capsulatus_str._Bath 1
Dichelobacter_nodosus_VCS1703A 1
Halothiobacillus_neapolitanus_c2 1
Spiribacter_sp._UAH-SP71 1
Alkalilimnicola_ehrlichii_MLHE-1 1
Allochromatium_vinosum_DSM_180 3
Thiocystis_violascens_DSM_198 3
Nitrosococcus_watsonii_C-113 2
Nitrosococcus_halophilus_Nc4 3
Nitrosococcus_oceani_ATCC_19707 2
Coxiella_burnetii_Dugway_5J108-111 2
Legionella_longbeachae_NSW150 1
Legionella_pneumophila_str._Corby 1
gamma_proteobacterium_HdN1 1
Psychrobacter_sp._G 0
Psychrobacter_arcticus_273-4 0
Psychrobacter_cryohalolentis_K5 0
Acinetobacter_oleivorans_DR1 1
Acinetobacter_calcoaceticus_PHEA-2 1
Acinetobacter_baumannii_ATCC_17978 1
Acinetobacter_sp._ADP1 1
Thioalkalimicrobium_cyclicum_ALM1 0
Hyperthermus_butylicus_DSM_5456 0
Sulfolobus_tokodaii_str._7 0
Sulfolobus_islandicus_Y.N.15.51 0
Pyrobaculum_calidifontis_JCM_11548 0
Methanosaeta_thermophila_PT 0
Methanosarcina_barkeri_str._Fusaro 0
Methanospirillum_hungatei_JF-1 3
Methanoplanus_petrolearius_DSM_11571 1
Methanoculleus_bourgensis_MS2 1
Methanoculleus_marisnigri_JR1 1
Ferroglobus_placidus_DSM_10642 0
Archaeoglobus_profundus_DSM_5631 0
Archaeoglobus_fulgidus_DSM_4304 0
Methanocaldococcus_jannaschii_DSM_2661 0
Methanococcus_aeolicus_Nankai-3 0
Methanobrevibacter_sp._AbM4 0
Complete_genome_sequence_of_Methanobacterium_sp._Mb1 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   14
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   9
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   10
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   11
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   15
Cryptococcus_neoformans_var._grubii_H99_ 4
Cryptococcus_neoformans_B-3501A_ 3
Cryptococcus_neoformans_JEC21_ 2
Paracoccidioides_brasiliensis_Pb01_ 2
Paracoccidioides_brasiliensis_Pb03_ 2
Coccidioides_posadasii_str._Silveira_ 2
Coccidioides_immitis_RMSCC_3703_ 3
Coccidioides_immitis_RMSCC_2394_ 2
Coccidioides_immitis_H538.4_ 2
Ajellomyces_dermatitidis_ER-3_ 3
Histoplasma_capsulatum_H143 3
Histoplasma_capsulatum_H88 2
Histoplasma_capsulatum_G186AR 2
Aspergillus_fumigatus_A1163_ 3
Candida_albicans_WO-1_ 2
Saccharomyces_cerevisiae_UC5 2
Saccharomyces_cerevisiae_PW5 2
Saccharomyces_cerevisiae_FL100 1
Saccharomyces_cerevisiae_CLIB382 1
Saccharomyces_cerevisiae_CLIB324 0
Saccharomyces_cerevisiae_CBS7960 1
Saccharomyces_cerevisiae_YJM269 0
Saccharomyces_cerevisiae_T7 1
Saccharomyces_cerevisiae_FostersB 5
Saccharomyces_cerevisiae_FostersO 1
Saccharomyces_cerevisiae_VL3 3
Saccharomyces_cerevisiae_Vin13 3
Saccharomyces_cerevisiae_LalvinQA23 3
Saccharomyces_cerevisiae_AWRI796 4
Saccharomyces_cerevisiae_Sigma1278b 1
Saccharomyces_cerevisiae_W303 2
Saccharomyces_cerevisiae_JAY291 1
Saccharomyces_cerevisiae_AWRI1631 3
Saccharomyces_cerevisiae_YPS163 0
Saccharomyces_cerevisiae_M22 1
Saccharomyces_cerevisiae_T73 1
Saccharomyces_cerevisiae_CLIB215 0
Saccharomyces_cerevisiae_Y10 1
Saccharomyces_cerevisiae_YJM789_ 1
Saccharomyces_cerevisiae_YJM789 1
Saccharomyces_cerevisiae_RM11-1a 1
Saccharomyces_cerevisiae_RM11-1a_ 1
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   1
Schizosaccharomyces_pombe_972h-_ 5
Batrachochytrium_dendrobatidis_JEL423_ 6
Batrachochytrium_dendrobatidis_JAM81_ 6
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   16
Hordeum_vulgare_22   (Domesticated barley)   66
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   12
Trypanosoma_brucei_Lister_427_v4.1 5
Neospora_caninum_Nc-Liverpool_6.2 1
Plasmodium_falciparum_HB3_ 6
Plasmodium_falciparum_Dd2_ 7
Chroococcidiopsis_thermalis_PCC_7203 8
Chamaesiphon_minutus_PCC_6605 2
Synechocystis_sp._PCC_6803_substr._PCC-P 2
Synechocystis_sp._PCC_6803_substr._PCC-N 2
Synechocystis_sp._PCC_6803_substr._GT-I 2
Synechocystis_sp._PCC_6803 2
Cyanobium_gracile_PCC_6307 2
Dactylococcopsis_salina_PCC_8305 2
Synechococcus_sp._JA-2-3B'a(2-13) 3
Synechococcus_sp._JA-3-3Ab 3
Synechococcus_sp._CC9902 2
Synechococcus_sp._RCC307 1
Synechococcus_sp._CC9605 2
Synechococcus_sp._WH_8102 2
Synechococcus_sp._WH_7803 1
Synechococcus_sp._PCC_7002 2
Synechococcus_elongatus_PCC_6301 2
Prochlorococcus_marinus_str._NATL1A 1
Prochlorococcus_marinus_str._MIT_9301 0
Prochlorococcus_marinus_str._AS9601 0
Prochlorococcus_marinus_subsp._marinus_str._CCMP1375 1
Prochlorococcus_marinus_subsp._pastoris_str._CCMP1986 1
Prochlorococcus_marinus_str._MIT_9215 0
Prochlorococcus_marinus_str._MIT_9211 1
Prochlorococcus_marinus_str._MIT_9313 1
Prochlorococcus_marinus_str._MIT_9312 1
Prochlorococcus_marinus_str._MIT_9303 1
Prochlorococcus_marinus_str._NATL2A 1
Crinalium_epipsammum_PCC_9333 5
Oscillatoria_nigro-viridis_PCC_7112 4
Oscillatoria_acuminata_PCC_6304 3
Arthrospira_platensis_NIES-39 3
Cyanothece_sp._PCC_7822 6
Cyanothece_sp._PCC_7425 5
Cyanothece_sp._PCC_7424 5
Cyanothece_sp._ATCC_51142 5
Cyanothece_sp._PCC_8801 3
Cyanobacterium_aponinum_PCC_10605 2
Cyanobacterium_stanieri_PCC_7202 3
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 4
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 6
Stanieria_cyanosphaera_PCC_7437 5
Calothrix_parietina_Calothrix_sp._PCC_6303 4
Cylindrospermum_stagnale_PCC_7417 5
Anabaena_cylindrica_PCC_7122 2
Mycoplasma_haemofelis_str._Langford_1 0
Mycoplasma_hyopneumoniae_J 0
Nocardiopsis_alba_ATCC_BAA-2165 0
Streptomyces_rapamycinicus_NRRL_5491 1
Chthonomonas_calidirosea_T49 1
Erysipelothrix_rhusiopathiae_SY1027 0
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 0
Sulfobacillus_acidophilus_TPY 1
Clostridium_acidurici_9a 0
Desulfosporosinus_meridiei_DSM_13257 1
Desulfitobacterium_dichloroeliminans_LMG_P-21439 1
Desulfitobacterium_hafniense_DCB-2 1
Desulfotomaculum_gibsoniae_DSM_7213 1
Clostridium_sp._SY8519 0
Clostridium_autoethanogenum_DSM_10061 0
Clostridium_perfringens_SM101 0
Clostridium_perfringens_str._13 0
Clostridium_botulinum_A3_str._Loch_Maree 0
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 0
Halobacteroides_halobius_DSM_5150 0
Enterococcus_casseliflavus_EC20 0
Lactobacillus_salivarius_UCC118 0
Lactobacillus_plantarum_subsp._plantarum_P-8 0
Lactobacillus_helveticus_R0052 0
Lactobacillus_helveticus_H10 0
Lactobacillus_helveticus_CNRZ32 0
Lactobacillus_acidophilus_La-14 0
Lactobacillus_acidophilus_NCFM 0
Lactococcus_lactis_subsp._cremoris_KW2 0
Lactococcus_lactis_subsp._cremoris_A76 0
Streptococcus_oligofermentans_AS_1.3089 0
Streptococcus_thermophilus_JIM_8232 0
Paenibacillus_sp._Y412MC10 0
Paenibacillus_polymyxa_CR1 0
Paenibacillus_polymyxa_SC2 0
Paenibacillus_polymyxa_E681 0
Listeria_monocytogenes_N53-1 0
Listeria_monocytogenes_La111 0
Listeria_monocytogenes_serotype_4b_str._LL195 0
Listeria_monocytogenes_07PF0776 0
Listeria_monocytogenes_M7 0
Listeria_monocytogenes_J1-220 0
Listeria_monocytogenes_J1816 0
Listeria_monocytogenes_SLCC2376 0
Listeria_monocytogenes_ATCC_19117 0
Listeria_monocytogenes_L312 0
Listeria_monocytogenes_SLCC2479 0
Listeria_monocytogenes_SLCC7179 0
Listeria_monocytogenes_SLCC2540 0
Listeria_monocytogenes_SLCC2378 0
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 0
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 0
Listeria_monocytogenes_serotype_7_str._SLCC2482 0
Listeria_monocytogenes_08-5578 0
Listeria_monocytogenes_08-5923 0
Listeria_monocytogenes_L99 0
Listeria_monocytogenes_HCC23 0
Listeria_monocytogenes_J0161 0
Listeria_monocytogenes_Finland_1998 0
Listeria_monocytogenes_FSL_R2-561 0
Listeria_monocytogenes_serotype_4b_str._F2365 0
Listeria_monocytogenes_EGD-e 0
Geobacillus_sp._Y4.1MC1 0
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 0
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 0
Bacillus_thuringiensis_HD-789 0
Bacillus_thuringiensis_YBT-1518 0
Bacillus_thuringiensis_Bt407 0
Bacillus_thuringiensis_serovar_finitimus_YBT-020 0
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 0
Bacillus_cereus_FRI-35 0
Bacillus_cereus_AH187 0
Bacillus_cereus_NC7401 0
Bacillus_cereus_E33L 0
Bacillus_cereus_ATCC_10987 0
Bacillus_megaterium_QM_B1551 0
Chlorobium_phaeobacteroides_BS1 2
Salinibacter_ruber_DSM_13855 0
Emticicia_oligotrophica_DSM_17448 2
Prevotella_dentalis_DSM_3688 0
Porphyromonas_gingivalis_TDC60 1
Porphyromonas_gingivalis_W83 1
Alistipes_shahii_WAL_8301 1
Bacteroides_xylanisolvens_XB1A 3
Bacteroides_fragilis_638R 4
Bacteroides_fragilis_NCTC_9343 4
Blattabacterium_sp._(Panesthia_angustipennis_spadica)_Blattabacterium_sp._(Panesthia_angustipennis_spadica)_str._BPAA 1
Blattabacterium_sp._(Blaberus_giganteus) 1
Blattabacterium_sp._(Blatta_orientalis)_Blattabacterium_sp._(Blatta_orientalis)_str._Tarazona 1
Blattabacterium_sp._(Periplaneta_americana)_str._BPLAN 1
Blattabacterium_sp._(Cryptocercus_punctulatus)_str._Cpu 1
Blattabacterium_sp._(Mastotermes_darwiniensis)_str._MADAR 1
Singulisphaera_acidiphila_DSM_18658 4
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 3
Leptospira_interrogans_serovar_Lai_str._56601 3
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 3
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 4
Brachyspira_pilosicoli_WesB 0
Treponema_pedis_str._T_A4 0
Treponema_pallidum_str._Fribourg-Blanc 1
Treponema_pallidum_subsp._pertenue_str._Gauthier 1
Treponema_pallidum_subsp._pertenue_str._CDC2 1
Treponema_pallidum_subsp._pertenue_str._SamoaD 1
Treponema_pallidum_subsp._pallidum_str._Mexico_A 1
Treponema_pallidum_subsp._pallidum_str._Chicago 1
Treponema_pallidum_subsp._pallidum_DAL-1 1
Treponema_pallidum_subsp._pallidum_str._Nichols 1
Spirochaeta_thermophila_DSM_6578 2
Hydrogenobacter_thermophilus_TK-6 0
Bdellovibrio_exovorus_JSS 3
Bdellovibrio_bacteriovorus_str._Tiberius 3
Arcobacter_butzleri_7h1h 1
Arcobacter_butzleri_ED-1 1
Helicobacter_cetorum_MIT_99-5656 1
Helicobacter_pylori_BM012S 1
Helicobacter_pylori_BM012A 1
Helicobacter_pylori_SouthAfrica20 1
Helicobacter_pylori_UM298 1
Helicobacter_pylori_UM066 1
Helicobacter_pylori_UM037 1
Helicobacter_pylori_UM299 1
Helicobacter_pylori_UM032 1
Helicobacter_pylori_OK310 1
Helicobacter_pylori_OK113 1
Helicobacter_pylori_Rif2 1
Helicobacter_pylori_Rif1 1
Helicobacter_pylori_HUP-B14 1
Helicobacter_pylori_PeCan18 1
Helicobacter_pylori_Shi169 1
Helicobacter_pylori_Shi112 1
Helicobacter_pylori_Shi417 1
Helicobacter_pylori_Aklavik86 1
Helicobacter_pylori_Aklavik117 1
Helicobacter_pylori_SNT49 1
Helicobacter_pylori_Puno135 1
Helicobacter_pylori_Puno120 1
Helicobacter_pylori_ELS37 1
Helicobacter_pylori_Gambia94/24 1
Helicobacter_pylori_SouthAfrica7 1
Helicobacter_pylori_India7 1
Helicobacter_pylori_Lithuania75 1
Helicobacter_pylori_2017 1
Helicobacter_pylori_2018 1
Helicobacter_pylori_908 1
Helicobacter_pylori_F57 1
Helicobacter_pylori_F30 1
Helicobacter_pylori_F16 1
Helicobacter_pylori_Sat464 1
Helicobacter_pylori_Cuz20 1
Helicobacter_pylori_PeCan4 1
Helicobacter_pylori_SJM180 1
Helicobacter_pylori_B8 1
Helicobacter_pylori_52 1
Helicobacter_pylori_v225d 1
Helicobacter_pylori_83 1
Helicobacter_pylori_35A 1
Helicobacter_pylori_P12 1
Helicobacter_pylori_G27 1
Helicobacter_pylori_Shi470 1
Helicobacter_pylori_HPAG1 1
Helicobacter_pylori_51 1
Helicobacter_pylori_F32 1
Helicobacter_pylori_J99 1
Helicobacter_pylori_26695 1
Helicobacter_pylori_26695 1
Lawsonia_intracellularis_N343 1
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 6
Desulfovibrio_vulgaris_RCH1 3
Desulfovibrio_vulgaris_str._'Miyazaki_F' 3
Desulfovibrio_vulgaris_str._Hildenborough 3
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 1
Desulfovibrio_desulfuricans_ND132 3
Geobacter_sp._M18 0
Geobacter_sulfurreducens_PCA 1
Sorangium_cellulosum_So0157-2 1
Myxococcus_stipitatus_DSM_14675 0
Burkholderia_phenoliruptrix_BR3459a 0
Burkholderia_sp._CCGE1003 0
Burkholderia_sp._CCGE1001 0
Burkholderia_pseudomallei_MSHR305 0
Burkholderia_pseudomallei_NCTC_13179 0
Burkholderia_pseudomallei_BPC006 0
Burkholderia_pseudomallei_1026b 0
Burkholderia_pseudomallei_MSHR346 0
Burkholderia_pseudomallei_K96243 0
Burkholderia_mallei_NCTC_10229 0
Burkholderia_mallei_ATCC_23344 0
Burkholderia_ambifaria_MC40-6 0
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 0
Alicycliphilus_denitrificans_BC 2
Variovorax_paradoxus_B4 0
Variovorax_paradoxus_EPS 0
Zymomonas_mobilis_subsp._mobilis_ATCC_29191 0
Zymomonas_mobilis_subsp._mobilis_CP4 0
Zymomonas_mobilis_subsp._mobilis_ATCC_10988 0
Zymomonas_mobilis_subsp._mobilis_ZM4 0
Zymomonas_mobilis_subsp._pomaceae_ATCC_29192 0
Rhodobacter_sphaeroides_KD131 0
Rhodobacter_sphaeroides_ATCC_17025 0
Rhodobacter_sphaeroides_2.4.1 0
Sinorhizobium_meliloti_GR4 0
Sinorhizobium_meliloti_SM11 0
Mannheimia_haemolytica_D174 0
Aeromonas_hydrophila_ML09-119 1
Vibrio_fischeri_ES114 1
Vibrio_sp._EJY3 2
Vibrio_parahaemolyticus_BB22OP 1
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 1
Vibrio_anguillarum_Listonella_anguillarum_M3 1
Vibrio_nigripulchritudo_VibrioScope 0
Vibrio_vulnificus_CMCP6 0
Vibrio_vulnificus_YJ016 0
Vibrio_cholerae_M66-2 0
Vibrio_cholerae_O395 0
Vibrio_cholerae_IEC224 0
Vibrio_cholerae_O1_str._2010EL-1786 0
Vibrio_cholerae_MJ-1236 0
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 0
Shewanella_sp._W3-18-1 0
Shewanella_sp._ANA-3 0
Shewanella_baltica_BA175 0
Shewanella_baltica_OS678 0
Shewanella_baltica_OS117 0
Shewanella_baltica_OS223 0
Shewanella_baltica_OS195 0
Shewanella_baltica_OS155 0
Shewanella_sp._MR-7 0
Shewanella_putrefaciens_200 0
Glaciecola_psychrophila_170 1
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 1
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 1
Alteromonas_macleodii_str._'Ionian_Sea_U8' 1
Alteromonas_macleodii_str._'Ionian_Sea_U7' 1
Alteromonas_macleodii_str._'Ionian_Sea_U4' 1
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 1
Alteromonas_macleodii_str._'English_Channel_615' 1
Alteromonas_macleodii_AltDE1 1
Alteromonas_macleodii_str._'English_Channel_673' 0
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 1
Alteromonas_macleodii_str._'Black_Sea_11' 1
Alteromonas_macleodii_ATCC_27126 1
Spiribacter_salinus_M19-40 1
Thioflavicoccus_mobilis_8321 2
Coxiella_burnetii_CbuK_Q154 2
Coxiella_burnetii_CbuG_Q212 2
Coxiella_burnetii_RSA_331 2
Coxiella_burnetii_RSA_493 2
Legionella_pneumophila_str._Paris 1
Legionella_pneumophila_subsp._pneumophila_LPE509 1
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 1
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 1
Legionella_pneumophila_subsp._pneumophila 1
Legionella_pneumophila_subsp._pneumophila 1
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 1
Legionella_pneumophila_2300/99_Alcoy 1
Serratia_plymuthica_4Rx13 0
Cronobacter_sakazakii_CMCC_45402 0
Pseudomonas_aeruginosa_SCV20265 0
Acinetobacter_genomosp._13TU__RUH2624 1
Acinetobacter_sp.__SH024 1
Acinetobacter_calcoaceticus_ruh2202 1
Acinetobacter_baumannii_ZW85-1 1
Acinetobacter_baumannii_TYTH-1 1
Acinetobacter_baumannii_BJAB0868 1
Acinetobacter_baumannii_BJAB0715 1
Acinetobacter_baumannii_BJAB07104 1
Acinetobacter_baumannii_TCDC-AB0715 1
Acinetobacter_baumannii_D1279779 1
Acinetobacter_baumannii_MDR-TJ 1
Acinetobacter_baumannii_1656-2 1
Acinetobacter_baumannii__ATCC_19606 1
Acinetobacter_baumannii_AB307-0294 1
Acinetobacter_baumannii_AYE 1
Acinetobacter_baumannii_SDF 1
Acinetobacter_baumannii_MDR-ZJ06 1
Acinetobacter_baumannii_AB0057 1
Acinetobacter_baumannii_ACICU 1
Acinetobacter_radioresistens__SH164 1
Acinetobacter_junii__SH205 1
Acinetobacter_johnsonii__SH046 1
Acinetobacter_lwoffii__SH145 1
Sulfolobus_islandicus_LAL14/1 0
Sulfolobus_islandicus_REY15A 0
Sulfolobus_islandicus_HVE10/4 0
Sulfolobus_islandicus_Y.G.57.14 0
Sulfolobus_islandicus_L.S.2.15 0
Sulfolobus_islandicus_M.16.27 0
Sulfolobus_islandicus_M.14.25 0
Sulfolobus_islandicus_M.16.4 0
Sulfolobus_islandicus_L.D.8.5 0
Methanoregula_formicica_Methanoregula_formicicum_SMSP 0
Ferroplasma_acidarmanus_fer1 0
Methanococcus_maripaludis_C7 0

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   4
Pan_troglodytes_69_2.1.4   (Chimpanzee)   4
Gorilla_gorilla_69_3.1   (Western gorilla)   5
Pongo_abelii_69_2   (Sumatran orangutan)   7
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   5
Macaca_mulatta_69_1   (Rhesus monkey)   8
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   5
Otolemur_garnettii_69_3   (Small-eared galago)   2
Microcebus_murinus_69_1   (Gray mouse lemur)   7
Rattus_norvegicus_69_3.4   (Norway rat)   4
Mus_musculus_69_38   (House mouse)   4
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   5
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   4
Cavia_porcellus_69_3   (Domestic guinea pig)   5
Oryctolagus_cuniculus_69_2   (Rabbit)   4
Ochotona_princeps_69   (American pika)   6
Tupaia_belangeri_69   (Northern tree shrew)   5
Sus_scrofa_69_10.2   (Pig)   13
Bos_taurus_69_3.1   (Cattle)   4
Vicugna_pacos_69_1   (Alpaca)   4
Tursiops_truncatus_69_1   (Bottlenose dolphin)   5
Mustela_putorius_furo_69_1.0   (Domestic ferret)   3
Ailuropoda_melanoleuca_69_1   (Giant panda)   8
Canis_familiaris_69_3.1   (Dog)   6
Felis_catus_69   (Domestic cat)   3
Equus_caballus_69_2   (Horse)   6
Myotis_lucifugus_69_2.0   (Little brown bat)   6
Pteropus_vampyrus_69_1   (Large flying fox)   5
Sorex_araneus_69_1   (European shrew)   5
Erinaceus_europaeus_69   (Western European hedgehog)   3
Procavia_capensis_69_1   (Cape rock hyrax)   7
Loxodonta_africana_69_3   (African savanna elephant)   3
Echinops_telfairi_69   (Small Madagascar hedgehog)   5
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   3
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   6
Macropus_eugenii_69_1.0   (Tammar wallaby)   5
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   7
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   7
Ornithorhynchus_anatinus_69_5   (Platypus)   16
Petromyzon_marinus_69_7.0   (Sea lamprey)   9
Meleagris_gallopavo_69_2   (Turkey)   2
Gallus_gallus_69_2   (Chicken)   3
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   11
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   7
Anolis_carolinensis_69_2.0   (Green anole)   7
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   4
Latimeria_chalumnae_69_1   (Coelacanth)   10
Gadus_morhua_69_1   (Atlantic cod)   9
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   5
Takifugu_rubripes_69_4   (Torafugu)   3
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   5
Oryzias_latipes_69_1   (Japanese medaka)   9
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   4
Oreochromis_niloticus_69_1.0   (Nile tilapia)   2
Danio_rerio_69_9   (Zebrafish)   3
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   4
Ciona_intestinalis_69   (Vase tunicate)   5
Drosophila_melanogaster_69_5   (Fruit fly)   6
Caenorhabditis_elegans_69_215   (Roundworm)   9
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   1
Arabidopsis_thaliana_10   (Thale cress)   20

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   157
Homo_sapiens__(NCBI_version)   (Human)   7
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   3
Heliconius_numata__(Incomplete) 32
Loa_loa_v3.3_(Request)   (Eye worm)   3
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   28
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   5
Moniliophthora_perniciosa_FA553__(Genome_survey) 7
Encephalitozoon_intestinalis__(endoparasite) 7
Encephalitozoon_cuniculi_(endoparasite) 5
Picea_sitchensis__(Incomplete)   (Sitka spruce)   5
Lotus_japonicus__(Early_assembly) 67
Malus_x_domestica_(Duplicate)   (Apple)   28
Ricinus_communis__(Early_assembly)   (Castor bean)   11
Nicotiana_benthamiana_0.4.4_(Early_draft) 43
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   23
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   23
Phoenix_dactylifera__(Early_draft)   (Date palm)   31
Guillardia_theta_(nucleomorph) 2
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 1
NCBI_plasmid_sequences_(Plasmids) 11
Core_Eukaryotic_Genes_458_(CEGMA) 0
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 2331
NCBI_viral_sequences_(Viral) 1
Protozoadb_2010_08_(Protozoadb) 231
STRING_v9.0.5_(STRING) 1241
Uniprot_2018_03_genome 20588
TargetDB__(Targets) 162
NCBI_2017_08_genome 18700
PDB_chains_(SCOP_1.75)_(PDB) 108
Protein_Data_Bank_(all_PDB_sequenc) 673
UniProt__viral_sequences_(Viral) 0

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