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Domain combinations for 54928,54928,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

54928 - RNA-binding domain, RBD
54928 - RNA-binding domain, RBD

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   40
Pan_troglodytes_76_2.1.4   (Chimpanzee)   13
Gorilla_gorilla_76_3.1   (Western gorilla)   17
Pongo_abelii_76_2   (Sumatran orangutan)   14
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   16
Papio_anubis_76   (Olive baboon)   7
Macaca_mulatta_76_1   (Rhesus monkey)   31
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   34
Otolemur_garnettii_76_3   (Small-eared galago)   12
Microcebus_murinus_76_1   (Gray mouse lemur)   8
Rattus_norvegicus_76_5.0   (Norway rat)   21
Mus_musculus_76_38   (House mouse)   29
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   13
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   16
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   21
Cavia_porcellus_76_3   (Domestic guinea pig)   15
Oryctolagus_cuniculus_76_2   (Rabbit)   9
Ochotona_princeps_76   (American pika)   13
Tupaia_belangeri_76   (Northern tree shrew)   14
Sus_scrofa_76_10.2   (Pig)   11
Bos_taurus_76_3.1   (Cattle)   11
Ovis_aries_76_3.1   (Sheep)   10
Vicugna_pacos_76_1   (Alpaca)   7
Tursiops_truncatus_76_1   (Bottlenose dolphin)   8
Mustela_putorius_furo_76_1.0   (Domestic ferret)   15
Ailuropoda_melanoleuca_76_1   (Giant panda)   14
Canis_familiaris_76_3.1   (Dog)   13
Felis_catus_76_6.2   (Domestic cat)   12
Equus_caballus_76_2   (Horse)   17
Myotis_lucifugus_76_2.0   (Little brown bat)   16
Pteropus_vampyrus_76_1   (Large flying fox)   11
Sorex_araneus_76_1   (European shrew)   6
Erinaceus_europaeus_76   (Western European hedgehog)   8
Procavia_capensis_76_1   (Cape rock hyrax)   9
Loxodonta_africana_76_3   (African savanna elephant)   19
Echinops_telfairi_76   (Small Madagascar hedgehog)   14
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   21
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   12
Macropus_eugenii_76_1.0   (Tammar wallaby)   11
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   15
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   10
Ornithorhynchus_anatinus_76_5   (Platypus)   10
Saccoglossus_kowalevskii_v3.0 13
Petromyzon_marinus_76_7.0   (Sea lamprey)   5
Meleagris_gallopavo_76_2   (Turkey)   13
Gallus_gallus_76_4   (Chicken)   14
Anas_platyrhynchos_76_1.0   (Mallard)   12
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   14
Ficedula_albicollis_76_1.0   (Collared flycatcher)   9
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   11
Anolis_carolinensis_76_2.0   (Green anole)   11
Xenopus_laevis_   (African clawed frog)   40
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   21
Latimeria_chalumnae_76_1   (Coelacanth)   11
Lepisosteus_oculatus_76   (Spotted gar)   8
Gadus_morhua_76_1   (Atlantic cod)   12
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   17
Takifugu_rubripes_76_4   (Torafugu)   40
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   19
Oryzias_latipes_76_1   (Japanese medaka)   21
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   11
Poecilia_formosa_76   (Amazon molly)   12
Oreochromis_niloticus_76_1.0   (Nile tilapia)   16
Astyanax_mexicanus_76   (Mexican tetra)   13
Danio_rerio_76_9   (Zebrafish)   34
Oikopleura_dioica 7
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   18
Ciona_intestinalis_76   (Vase tunicate)   6
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   5
Adineta_vaga 17
Octopus_bimaculoides_280 16
Crassostrea_gigas_22   (Pacific oyster)   5
Lottia_gigantea_   (Owl limpet)   0
Helobdella_robusta_ 7
Capitella_sp._I_ 4
Danaus_plexippus_OGS1.0   (Monarch butterfly)   4
Heliconius_melpomene_   (Postman butterfly)   3
Bombyx_mori_   (Domestic silkworm)   5
Nasonia_vitripennis_   (Jewel wasp)   2
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   7
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   5
Linepithema_humile_v1.1   (Argentine ant)   2
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   3
Solenopsis_invicta_v.2.2.3   (Red fire ant)   4
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   4
Atta_cephalotes_v1.1 1
Camponotus_floridanus_v3.3   (Florida carpenter ant)   5
Lucilia_cuprina   (Australian sheep blowfly)   2
Drosophila_grimshawi_1.3 5
Drosophila_willistoni_1.3 4
Drosophila_pseudoobscura_2.13 2
Drosophila_persimilis_1.3 2
Drosophila_suzukii 3
Drosophila_yakuba_1.3 4
Drosophila_simulans_1.3 3
Drosophila_sechellia_1.3 3
Drosophila_melanogaster_76_5   (Fruit fly)   19
Drosophila_erecta_1.3 4
Drosophila_ananassae_1.3 5
Drosophila_virilis_1.2 4
Drosophila_mojavensis_1.3 6
Megaselia_scalaris_22 2
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   6
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   6
Anopheles_darlingi_22   (American malaria mosquito)   1
Anopheles_gambiae_49_3j   (African malaria mosquito)   6
Tribolium_castaneum_3.0   (Red flour beetle)   3
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   8
Acyrthosiphon_pisum_   (Pea aphid)   8
Rhodnius_prolixus_22 6
Daphnia_pulex_   (Common water flea)   6
Strigamia_maritima_22 8
Sarcoptes_scabiei 2
Tetranychus_urticae_   (Two-spotted spider mite)   4
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   4
Pristionchus_pacificus_ 2
Meloidogyne_incognita_   (Southern root-knot nematode)   2
Meloidogyne_hapla_ 3
Onchocerca_volvulus_22 2
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   5
Caenorhabditis_japonica_ 3
Caenorhabditis_brenneri_ 1
Caenorhabditis_remanei_ 4
Caenorhabditis_elegans_76_235   (Roundworm)   26
Caenorhabditis_briggsae_2 4
Trichinella_spiralis_22 1
Hymenolepis_microstoma_ 5
Echinococcus_multilocularis_ 6
Echinococcus_granulosus_ 6
Taenia_solium_   (Pork tapeworm)   6
Schistosoma_mansoni_ 7
Mnemiopsis_leidyi   (Sea walnut)   10
Thelohanellus_kitauei 4
Acropora_digitifera_v1.0 5
Nematostella_vectensis_1.0   (Starlet sea anemone)   5
Hydra_vulgaris 8
Amphimedon_queenslandica 5
Trichoplax_adhaerens_ 2
Proterospongia_sp._ATCC_50818_ 3
Monosiga_brevicollis_ 1
Sphaeroforma_arctica_JP610_ 1
Capsaspora_owczarzaki_ATCC_30864_ 2
Conidiobolus_coronatus_NRRL28638_v1.0 1
Mortierella_verticillata_NRRL_6337_ 1
Phycomyces_blakesleeanus_ 0
Rhizopus_oryzae_RA_99-880_ 6
Mucor_circinelloides_ 2
Rhizomucor_miehei_CAU432_ 3
Malassezia_globosa_CBS_7966_ 2
Sporisorium_reilianum_22 0
Ustilago_maydis_ 0
Mixia_osmundae_IAM_14324_v1.0 0
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 2
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 4
Melampsora_laricis-populina_ 2
Rhodotorula_graminis_WP1_v1.0 1
Sporobolomyces_roseus_IAM_13481_ 1
Microbotryum_violaceum_22 1
Wallemia_sebi_v1.0 1
Sphaerobolus_stellatus_v1.0 1
Piloderma_croceum_F_1598_v1.0 1
Serpula_lacrymans_var._lacrymans_S7.9_ 0
Coniophora_puteana 0
Hydnomerulius_pinastri_v2.0 0
Paxillus_rubicundulus_Ve08.2h10_v1.0 1
Pisolithus_microcarpus_441_v1.0 1
Pisolithus_tinctorius_Marx_270_v1.0 0
Scleroderma_citrinum_Foug_A_v1.0 1
Coprinopsis_cinerea_okayama7_130_v3 1
Pleurotus_ostreatus_   (Oyster mushroom)   1
Amanita_thiersii_Skay4041_v1.0 1
Amanita_muscaria_Koide_v1.0   (Fly agaric)   2
Galerina_marginata_v1.0 2
Hebeloma_cylindrosporum_h7_v2.0 1
Laccaria_bicolor_S238N-H82_ 1
Agaricus_bisporus_var._bisporus_ 0
Schizophyllum_commune_ 0
Stereum_hirsutum_FP-91666_SS1__v1.0 2
Heterobasidion_annosum_ 1
Gloeophyllum_trabeumv1.0 0
Punctularia_strigosozonata_v1.0 1
Sebacina_vermifera_MAFF_305830_v1.0 1
Fomitiporia_mediterranea_v1.0 0
Tulasnella_calospora_AL13/4D_v1.0 2
Postia_placenta_ 0
Wolfiporia_cocos_MD-104_SS10__v1.0 1
Fomitopsis_pinicolav1.0 4
Fomitopsis_pinicola_FP-58527_SS1_v3.0 2
Phanerochaete_chrysosporium_RP-78_2.1 3
Dichomitus_squalens 2
Trametes_versicolor_v1.0 1
Tremella_mesenterica_   (Witches' butter)   0
Daldinia_eschscholzii_EC12_v1.0 0
Apiospora_montagnei_NRRL_25634_v1.0 4
Magnaporthe_poae_ATCC_64411_22 1
Magnaporthe_grisea_70-15_ 1
Podospora_anserina_ 1
Sporotrichum_thermophile_ATCC_42464_ 2
Thielavia_terrestris_NRRL_8126_ 1
Chaetomium_globosum_CBS_148.51_ 0
Neurospora_tetrasperma_ 2
Neurospora_discreta_FGSC_8579_ 2
Neurospora_crassa_OR74A_ 1
Cryphonectria_parasitica_   (Chestnut blight fungus)   2
Verticillium_albo-atrum_VaMs.102_ 3
Verticillium_dahliae_VdLs.17_ 2
Acremonium_alcalophilumv_1.0 0
Glomerella_graminicola_22 3
Fusarium_graminearum_ 2
Nectria_haematococca_mpVI_ 1
Fusarium_oxysporum_f._sp._lycopersici_4286_ 3
Fusarium_verticillioides_7600_ 2
Trichoderma_asperellum_CBS_433.97_v1.0 2
Trichoderma_atroviride_ 2
Trichoderma_citrinoviride_v1.0 2
Trichoderma_reesei_1.2 1
Trichoderma_virens_Gv29-8_ 2
Trichoderma_longibrachiatum_ATCC_18648_v1.0 2
Trichoderma_harzianum_CBS_226.95_v1.0 2
Amorphotheca_resinae_v1.0   (Creosote fungus)   1
Botrytis_cinerea_B05.10_ 0
Sclerotinia_sclerotiorum_ 1
Blumeria_graminis_22 1
Didymella_exigua_CBS_183.55_v1.0 2
Leptosphaeria_maculans_22 0
Setosphaeria_turcica_v1.0 1
Cochliobolus_miyabeanus_ATCC_44560_v1.0 1
Cochliobolus_victoriae_FI3_v1.0 1
Cochliobolus_carbonum_26-R-13_v1.0 1
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   0
Alternaria_brassicicola_ 0
Cochliobolus_lunatus_m118_v2.0 1
Pyrenophora_teres_f._teres_22 1
Pyrenophora_tritici-repentis_ 1
Stagonospora_nodorum_ 1
Mycosphaerella_graminicola_IPO323_ 1
Zasmidium_cellare_ATCC_36951_v1.0 2
Dothistroma_septosporum 0
Septoria_musiva_v1.0 0
Mycosphaerella_fijiensis_CIRAD86_ 1
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 2
Paracoccidioides_brasiliensis_Pb18_ 0
Coccidioides_posadasii_RMSCC_3488_ 3
Coccidioides_immitis_RS_ 1
Ajellomyces_dermatitidis_SLH14081_ 2
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 0
Microsporum_canis_CBS_113480_ 1
Trichophyton_equinum_CBS_127.97_ 1
Trichophyton_verrucosum_HKI_0517_ 2
Arthroderma_benhamiae_CBS_112371_ 1
Trichophyton_tonsurans_CBS_112818_ 1
Trichophyton_rubrum_CBS_118892_ 1
Uncinocarpus_reesii_1704_ 1
Aspergillus_zonatus_v1.0 1
Penicillium_chrysogenum_Wisconsin_54-1255_ 1
Penicillium_chrysogenum_v1.0 2
Aspergillus_acidus_v1.0 1
Aspergillus_fumigatus_Af293 1
Aspergillus_brasiliensis_v1.0 1
Aspergillus_nidulans_FGSC_A4_ 1
Aspergillus_sydowii_v1.0 2
Aspergillus_versicolor_v1.0 1
Aspergillus_glaucus 2
Aspergillus_carbonarius_ITEM_5010_ 2
Neosartorya_fischeri_NRRL_181_ 2
Aspergillus_terreus_NIH2624_ 1
Aspergillus_tubingensis_v1.0 2
Aspergillus_wentii_v1.0 3
Aspergillus_oryzae_RIB40_ 2
Aspergillus_niger_22 1
Aspergillus_niger_ATCC_1015_ 2
Aspergillus_flavus_NRRL3357_ 1
Aspergillus_clavatus_NRRL_1_ 1
Penicillium_marneffei_ATCC_18224_ 2
Tuber_melanosporum_Mel28_22 0
Tuber_melanosporum_Vittad_   (Perigord truffle)   0
Hansenula_polymorpha_v2.0 2
Dekkera_bruxellensis_CBS_2499_v2.0 1
Pichia_membranifaciensv1.0 1
Candida_tanzawaensis_NRRL_Y-17324__v1.0 0
Candida_dubliniensis_CD36_ 0
Candida_tropicalis_MYA-3404_ 0
Candida_parapsilosis_ 0
Candida_albicans_SC5314 0
Lodderomyces_elongisporus_NRRL_YB-4239_ 0
Babjeviella_inositovora_NRRL_Y-12698_v1.0 0
Pichia_stipitis_CBS_6054_ 1
Candida_guilliermondii_ATCC_6260_ 1
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 0
Debaromyces_hansenii 0
Wickerhamomyces_anomalus 2
Pichia_pastoris_GS115_ 1
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 0
Yarrowia_lipolytica_CLIB122 3
Candida_lusitaniae_ATCC_42720_ 1
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1
Vanderwaltozyma_polyspora_DSM_70294_ 2
Candida_glabrata_CBS138 1
Kluyveromyces_thermotolerans_CBS_6340 1
Lachancea_kluyveri_ 0
Kluyveromyces_waltii 2
Ashbya_gossypii_ATCC_10895_ 1
Zygosaccharomyces_rouxii_ 0
Saccharomyces_mikatae_MIT 0
Saccharomyces_paradoxus_MIT 0
Saccharomyces_cerevisiae_76   (Baker's yeast)   2
Saccharomyces_bayanus_MIT 0
Kluyveromyces_lactis 0
Schizosaccharomyces_cryophilus_OY26_22 1
Schizosaccharomyces_octosporus_yFS286_ 1
Schizosaccharomyces_japonicus_yFS275_ 0
Schizosaccharomyces_pombe   (Fission yeast)   0
Catenaria_anguillulae_PL171_v1.0 3
Allomyces_macrogynus_ATCC_38327_ 2
Spizellomyces_punctatus_DAOM_BR117_ 3
Dictyostelium_discoideum 0
Dictyostelium_purpureum_ 1
Entamoeba_dispar_1.2 6
Entamoeba_invadens_1.2 7
Entamoeba_histolytica_1 9
Selaginella_moellendorffii_ 7
Pinus_taeda   (Loblolly pine)   18
Picea_abies   (Norway spruce)   13
Eucalyptus_grandis_v201   (Rose gum)   17
Theobroma_cacao_B97-61/B2_v1   (Cacao)   9
Gossypium_raimondii_v221 68
Citrus_clementina_v165 17
Citrus_sinensis_v154   (Sweet orange)   26
Thellungiella_halophila_v173 14
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   18
Capsella_rubella_v183 7
Arabidopsis_lyrata_   (Lyrate rockcress)   13
Arabidopsis_thaliana_10   (Thale cress)   14
Carica_papaya_   (Papaya)   6
Medicago_truncatula_   (Barrel medic)   29
Phaseolus_vulgaris_v186   (French bean)   11
Glycine_max_v109   (Soybean)   19
Cucumis_sativus_v122   (Cucumber)   20
Fragaria_vesca_   (Wild strawberry)   5
Malus_domestica_v196   (Apple)   18
Prunus_persica_v139   (Peach)   7
Linum_usitatissimum_v200   (Flax)   23
Manihot_esculenta_v147   (Cassava)   13
Populus_trichocarpa_v156   (Black cottonwood)   20
Vitis_vinifera_   (Wine grape)   11
Mimulus_guttatus_v140   (Spotted monkey flower)   13
Solanum_lycopersicum_v.2.3   (Tomato)   16
Solanum_tuberosum_   (Potato)   31
Actinidia_chinensis_Hongyang_ 20
Aquilegia_coerulea_v195 22
Triticum_urartu_22 9
Triticum_aestivum_22   (Bread wheat)   29
Aegilops_tauschii_22 8
Brachypodium_distachyon_   (Stiff brome)   8
Oryza_barthii_22   (African wild rice)   14
Oryza_meridionalis_22 6
Oryza_glumaepatula_22 9
Oryza_glaberrima   (African rice)   7
Oryza_punctata_22 14
Oryza_nivara_22 10
Oryza_brachyantha_22   (Malo sina)   10
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   17
Oryza_sativa_v193   (Rice)   18
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   16
Panicum_virgatum_v202   (Switchgrass)   29
Setaria_italica_v164   (Foxtail millet)   12
Zea_mays_subsp._mays_   (Maize)   28
Zea_mays_v181   (Maize)   31
Sorghum_bicolor_   (Sorghum)   4
Musa_balbisiana   (Balbis banana)   15
Musa_acuminata_22   (Wild Malaysian banana)   15
Amborella_trichopoda_22 9
Physcomitrella_patens 4
Coccomyxa_subellipsoidea_sp._C-169_v2 5
Asterochloris_sp._Cgr/DA1pho_v1.0 1
Chlorella_variabilis_sp._NC64A_ 2
Chlorella_vulgaris_ 4
Volvox_carteri_f._nagariensis_ 2
Volvox_carteri_v199 2
Chlamydomonas_reinhardtii_4.0 4
Ostreococcus_sp._RCC809_ 1
Ostreococcus_lucimarinus_CCE9901_ 1
Ostreococcus_tauri_ 1
Bathycoccus_prasinos_ 0
Micromonas_sp._RCC299_ 0
Micromonas_pusilla_CCMP1545_v3.0 1
Cyanidioschyzon_merolae_strain_10D_22 2
Cyanidioschyzon_merolae 2
Porphyridium_purpureum_02_2012 1
Thecamonas_trahens_ATCC_50062_ 1
Bigelowiella_natans_CCMP2755_22 2
Cyanophora_paradoxa_ 6
Leishmania_mexicana_2.4 0
Leishmania_major_strain_Friedlin_ 0
Leishmania_infantum_JPCM5_2.4 0
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1
Trypanosoma_vivax_ 1
Trypanosoma_cruzi_strain_CL_Brener 0
Trypanosoma_congolense_2.4 0
Trypanosoma_brucei_gambiense_v4.1 0
Trypanosoma_brucei_TREU927_v4.1 1
Ectocarpus_siliculosus 0
Aureococcus_anophagefferens_ 0
Albugo_laibachii_22 2
Pythium_iwayamai_DAOM_BR242034_22 2
Pythium_arrhenomanes_ATCC_12531_22 3
Pythium_ultimum_v1.7-2 2
Pythium_aphanidermatum_DAOM_BR444_22 2
Pythium_irregulare_DAOM_BR486_22 2
Pythium_vexans_DAOM_BR484_22 2
Phytophthora_ramorum_1.1   (Sudden oak death agent)   1
Phytophthora_sojae_1.1 0
Phytophthora_infestans_T30-4_ 2
Phytophthora_capsici_ 1
Hyaloperonospora_arabidopsidis_22 2
Fragilariopsis_cylindrus 0
Thalassiosira_pseudonana_CCMP1335 0
Perkinsus_marinus_ATCC_50983_ 10
Paramecium_tetraurelia_ 11
Tetrahymena_thermophila_SB210_1_ 5
Ichthyophthirius_multifiliis_strain_G5_ 1
Cryptosporidium_hominis 1
Cryptosporidium_muris 1
Cryptosporidium_parvum_Iowa_II 1
Neospora_caninum 0
Toxoplasma_gondii_VEG 0
Toxoplasma_gondii_ME49 0
Toxoplasma_gondii_GT1 0
Babesia_bovis_T2Bo_ 2
Theileria_parva__ 0
Theileria_annulata 2
Plasmodium_falciparum_3D7_ 4
Plasmodium_vivax_SaI-1_7.0 2
Plasmodium_knowlesi_strain_H_ 3
Plasmodium_yoelii_ssp._yoelii_1_ 1
Plasmodium_chabaudi_ 2
Plasmodium_berghei_ANKA_ 2
Symbiodinium_minutum_clade_B1_v1.2 5
Naegleria_gruberi_ 1
Trichomonas_vaginalis_ 4
Guillardia_theta_CCMP2712_v1.0_ 1
Emiliania_huxleyi_CCMP1516_ 1
Sorangium_cellulosum_'So_ce_56' 1

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   36
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   12
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   6
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   5
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   8
Cryptococcus_neoformans_var._grubii_H99_ 0
Cryptococcus_neoformans_B-3501A_ 0
Cryptococcus_neoformans_JEC21_ 0
Paracoccidioides_brasiliensis_Pb01_ 0
Paracoccidioides_brasiliensis_Pb03_ 0
Coccidioides_posadasii_str._Silveira_ 2
Coccidioides_immitis_RMSCC_3703_ 0
Coccidioides_immitis_RMSCC_2394_ 1
Coccidioides_immitis_H538.4_ 2
Ajellomyces_dermatitidis_ER-3_ 1
Histoplasma_capsulatum_H143 0
Histoplasma_capsulatum_H88 0
Histoplasma_capsulatum_G186AR 0
Aspergillus_fumigatus_A1163_ 0
Candida_albicans_WO-1_ 0
Saccharomyces_cerevisiae_UC5 1
Saccharomyces_cerevisiae_PW5 1
Saccharomyces_cerevisiae_FL100 1
Saccharomyces_cerevisiae_CLIB324 0
Saccharomyces_cerevisiae_CBS7960 1
Saccharomyces_cerevisiae_YJM269 2
Saccharomyces_cerevisiae_T7 1
Saccharomyces_cerevisiae_FostersB 0
Saccharomyces_cerevisiae_FostersO 0
Saccharomyces_cerevisiae_VL3 2
Saccharomyces_cerevisiae_Vin13 2
Saccharomyces_cerevisiae_LalvinQA23 4
Saccharomyces_cerevisiae_AWRI796 1
Saccharomyces_cerevisiae_Sigma1278b 2
Saccharomyces_cerevisiae_W303 1
Saccharomyces_cerevisiae_JAY291 2
Saccharomyces_cerevisiae_AWRI1631 1
Saccharomyces_cerevisiae_YPS163 0
Saccharomyces_cerevisiae_M22 2
Saccharomyces_cerevisiae_T73 1
Saccharomyces_cerevisiae_CLIB215 1
Saccharomyces_cerevisiae_Y10 2
Saccharomyces_cerevisiae_YJM789_ 1
Saccharomyces_cerevisiae_YJM789 1
Saccharomyces_cerevisiae_RM11-1a 2
Saccharomyces_cerevisiae_RM11-1a_ 2
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   2
Schizosaccharomyces_pombe_972h-_ 0
Batrachochytrium_dendrobatidis_JEL423_ 1
Batrachochytrium_dendrobatidis_JAM81_ 3
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   9
Hordeum_vulgare_22   (Domesticated barley)   27
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   9
Trypanosoma_brucei_Lister_427_v4.1 1
Neospora_caninum_Nc-Liverpool_6.2 0
Plasmodium_falciparum_HB3_ 3
Plasmodium_falciparum_Dd2_ 0

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   8
Pan_troglodytes_69_2.1.4   (Chimpanzee)   11
Gorilla_gorilla_69_3.1   (Western gorilla)   13
Pongo_abelii_69_2   (Sumatran orangutan)   12
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   13
Macaca_mulatta_69_1   (Rhesus monkey)   17
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   12
Otolemur_garnettii_69_3   (Small-eared galago)   12
Microcebus_murinus_69_1   (Gray mouse lemur)   8
Rattus_norvegicus_69_3.4   (Norway rat)   12
Mus_musculus_69_38   (House mouse)   8
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   13
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   16
Cavia_porcellus_69_3   (Domestic guinea pig)   15
Oryctolagus_cuniculus_69_2   (Rabbit)   9
Ochotona_princeps_69   (American pika)   13
Tupaia_belangeri_69   (Northern tree shrew)   14
Sus_scrofa_69_10.2   (Pig)   11
Bos_taurus_69_3.1   (Cattle)   10
Vicugna_pacos_69_1   (Alpaca)   7
Tursiops_truncatus_69_1   (Bottlenose dolphin)   8
Mustela_putorius_furo_69_1.0   (Domestic ferret)   14
Ailuropoda_melanoleuca_69_1   (Giant panda)   14
Canis_familiaris_69_3.1   (Dog)   11
Felis_catus_69   (Domestic cat)   8
Equus_caballus_69_2   (Horse)   14
Myotis_lucifugus_69_2.0   (Little brown bat)   16
Pteropus_vampyrus_69_1   (Large flying fox)   11
Sorex_araneus_69_1   (European shrew)   6
Erinaceus_europaeus_69   (Western European hedgehog)   8
Procavia_capensis_69_1   (Cape rock hyrax)   9
Loxodonta_africana_69_3   (African savanna elephant)   13
Echinops_telfairi_69   (Small Madagascar hedgehog)   14
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   7
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   12
Macropus_eugenii_69_1.0   (Tammar wallaby)   10
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   11
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   9
Ornithorhynchus_anatinus_69_5   (Platypus)   10
Petromyzon_marinus_69_7.0   (Sea lamprey)   5
Meleagris_gallopavo_69_2   (Turkey)   6
Gallus_gallus_69_2   (Chicken)   12
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   13
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   7
Anolis_carolinensis_69_2.0   (Green anole)   10
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   11
Latimeria_chalumnae_69_1   (Coelacanth)   7
Gadus_morhua_69_1   (Atlantic cod)   10
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   14
Takifugu_rubripes_69_4   (Torafugu)   14
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   8
Oryzias_latipes_69_1   (Japanese medaka)   13
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   11
Oreochromis_niloticus_69_1.0   (Nile tilapia)   11
Danio_rerio_69_9   (Zebrafish)   13
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   5
Ciona_intestinalis_69   (Vase tunicate)   6
Drosophila_melanogaster_69_5   (Fruit fly)   5
Caenorhabditis_elegans_69_215   (Roundworm)   2
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   2
Arabidopsis_thaliana_10   (Thale cress)   8

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   48
Homo_sapiens__(NCBI_version)   (Human)   15
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   7
Heliconius_numata__(Incomplete) 1
Loa_loa_v3.3_(Request)   (Eye worm)   5
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   7
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   1
Moniliophthora_perniciosa_FA553__(Genome_survey) 0
Encephalitozoon_intestinalis__(endoparasite) 2
Encephalitozoon_cuniculi_(endoparasite) 1
Picea_sitchensis__(Incomplete)   (Sitka spruce)   5
Lotus_japonicus__(Early_assembly) 5
Malus_x_domestica_(Duplicate)   (Apple)   18
Ricinus_communis__(Early_assembly)   (Castor bean)   10
Nicotiana_benthamiana_0.4.4_(Early_draft) 36
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   15
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   16
Phoenix_dactylifera__(Early_draft)   (Date palm)   9
Guillardia_theta_(nucleomorph) 1
Protozoadb_2010_08_(Protozoadb) 67
STRING_v9.0.5_(STRING) 550
Uniprot_2018_03_genome 34560
NCBI_2017_08_genome 10842
Protein_Data_Bank_(all_PDB_sequenc) 4
TargetDB__(Targets) 16

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