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Domain combinations for 55486,82895,_gap_,82895,82895,_gap_,82895,82895,82895,82895,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55486 - Metalloproteases ("zincins"), catalytic domain
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Mus_musculus_76_38   (House mouse)   0
Sus_scrofa_76_10.2   (Pig)   2
Pteropus_vampyrus_76_1   (Large flying fox)   0
Ciona_intestinalis_76   (Vase tunicate)   0

Longest transcript per gene
Genome     Number
Sus_scrofa_69_10.2   (Pig)   1
Pteropus_vampyrus_69_1   (Large flying fox)   0
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   0
Ciona_intestinalis_69   (Vase tunicate)   0

Others
Genome     Number
Uniprot_2018_03_genome 47
NCBI_2017_08_genome 2
STRING_v9.0.5_(STRING) 0

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