SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 55620,55083 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

55620 - Tetrahydrobiopterin biosynthesis enzymes-like
55083 - 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Adineta_vaga 0
Mnemiopsis_leidyi   (Sea walnut)   0
Nematostella_vectensis_1.0   (Starlet sea anemone)   0
Sphaeroforma_arctica_JP610_ 0
Conidiobolus_coronatus_NRRL28638_v1.0 0
Mortierella_verticillata_NRRL_6337_ 0
Phycomyces_blakesleeanus_ 0
Rhizopus_oryzae_RA_99-880_ 0
Mucor_circinelloides_ 0
Rhizomucor_miehei_CAU432_ 0
Sporisorium_reilianum_22 0
Mixia_osmundae_IAM_14324_v1.0 0
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 0
Rhodotorula_graminis_WP1_v1.0 0
Sporobolomyces_roseus_IAM_13481_ 0
Serpula_lacrymans_var._lacrymans_S7.9_ 0
Coniophora_puteana 0
Hydnomerulius_pinastri_v2.0 0
Paxillus_rubicundulus_Ve08.2h10_v1.0 0
Coprinopsis_cinerea_okayama7_130_v3 0
Hebeloma_cylindrosporum_h7_v2.0 0
Agaricus_bisporus_var._bisporus_ 0
Stereum_hirsutum_FP-91666_SS1__v1.0 0
Gloeophyllum_trabeumv1.0 0
Fomitiporia_mediterranea_v1.0 0
Tulasnella_calospora_AL13/4D_v1.0 0
Postia_placenta_ 0
Wolfiporia_cocos_MD-104_SS10__v1.0 0
Fomitopsis_pinicolav1.0 0
Fomitopsis_pinicola_FP-58527_SS1_v3.0 0
Phanerochaete_chrysosporium_RP-78_2.1 0
Dichomitus_squalens 0
Trametes_versicolor_v1.0 0
Tremella_mesenterica_   (Witches' butter)   0
Tuber_melanosporum_Mel28_22 0
Tuber_melanosporum_Vittad_   (Perigord truffle)   0
Hansenula_polymorpha_v2.0 0
Dekkera_bruxellensis_CBS_2499_v2.0 0
Pichia_membranifaciensv1.0 0
Candida_tanzawaensis_NRRL_Y-17324__v1.0 0
Candida_dubliniensis_CD36_ 0
Candida_tropicalis_MYA-3404_ 0
Candida_parapsilosis_ 0
Candida_albicans_SC5314 0
Lodderomyces_elongisporus_NRRL_YB-4239_ 0
Babjeviella_inositovora_NRRL_Y-12698_v1.0 0
Pichia_stipitis_CBS_6054_ 0
Candida_guilliermondii_ATCC_6260_ 0
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 0
Debaromyces_hansenii 0
Wickerhamomyces_anomalus 0
Pichia_pastoris_GS115_ 0
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 0
Yarrowia_lipolytica_CLIB122 0
Candida_lusitaniae_ATCC_42720_ 0
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 0
Vanderwaltozyma_polyspora_DSM_70294_ 0
Candida_glabrata_CBS138 0
Kluyveromyces_thermotolerans_CBS_6340 0
Lachancea_kluyveri_ 0
Kluyveromyces_waltii 0
Ashbya_gossypii_ATCC_10895_ 0
Zygosaccharomyces_rouxii_ 0
Saccharomyces_mikatae_MIT 0
Saccharomyces_paradoxus_MIT 0
Saccharomyces_cerevisiae_76   (Baker's yeast)   0
Saccharomyces_bayanus_MIT 0
Kluyveromyces_lactis 0
Schizosaccharomyces_cryophilus_OY26_22 0
Schizosaccharomyces_octosporus_yFS286_ 0
Schizosaccharomyces_japonicus_yFS275_ 0
Schizosaccharomyces_pombe   (Fission yeast)   0
Catenaria_anguillulae_PL171_v1.0 0
Allomyces_macrogynus_ATCC_38327_ 0
Spizellomyces_punctatus_DAOM_BR117_ 0
Dictyostelium_discoideum 0
Dictyostelium_purpureum_ 0
Ilumatobacter_coccineus 1
Acidothermus_cellulolyticus_11B 0
Frankia_sp._EAN1pec 1
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 1
Corynebacterium_kroppenstedtii_DSM_44385 1
Tropheryma_whipplei_TW08/27 0
Kytococcus_sedentarius_DSM_20547 1
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 1
Intrasporangium_calvum_DSM_43043 1
Brachybacterium_faecium_DSM_4810 1
Arthrobacter_arilaitensis_Re117 1
Bifidobacterium_longum_subsp._longum_JDM301 0
Bifidobacterium_dentium_Bd1 0
Bifidobacterium_breve_ACS-071-V-Sch8b 0
Bifidobacterium_bifidum_S17 0
Bifidobacterium_adolescentis_ATCC_15703 0
Arcanobacterium_haemolyticum_DSM_20595 1
Mobiluncus_curtisii_ATCC_43063 0
Finegoldia_magna_ATCC_29328 1
Ruminococcus_sp. 1
Ruminococcus_albus_7 1
Acetobacterium_woodii_DSM_1030 1
Eubacterium_limosum_KIST612 1
[Ruminococcus]_torques 1
Coprococcus_sp._ART55/1 1
Heliobacterium_modesticaldum_Ice1 1
Clostridium_novyi_NT 1
Clostridium_ljungdahlii_DSM_13528 1
Clostridium_kluyveri_DSM_555 1
Clostridium_beijerinckii_NCIMB_8052 1
Clostridium_perfringens_ATCC_13124 1
Clostridium_cellulovorans_743B 1
Clostridium_acetobutylicum_ATCC_824 1
Ammonifex_degensii_KC4 1
Streptococcus_sp._I-P16 1
Streptococcus_sp._I-G2 1
Streptococcus_pseudopneumoniae_IS7493 1
Streptococcus_mitis_B6 1
Streptococcus_parasanguinis_ATCC_15912 1
Streptococcus_pneumoniae_P1031 1
Streptococcus_sanguinis_SK36 1
Streptococcus_oralis_Uo5 1
Streptococcus_gordonii_str._Challis_substr._CH1 1
Sebaldella_termitidis_ATCC_33386 1
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 1
Gluconobacter_oxydans_621H 1
Sulfolobus_acidocaldarius_DSM_639 1
Caldivirga_maquilingensis_IC-167 1

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Strains
Genome     Number
Cryptococcus_neoformans_var._grubii_H99_ 0
Cryptococcus_neoformans_B-3501A_ 0
Cryptococcus_neoformans_JEC21_ 0
Candida_albicans_WO-1_ 0
Saccharomyces_cerevisiae_UC5 0
Saccharomyces_cerevisiae_PW5 0
Saccharomyces_cerevisiae_CBS7960 0
Saccharomyces_cerevisiae_YJM269 0
Saccharomyces_cerevisiae_T7 0
Saccharomyces_cerevisiae_FostersB 0
Saccharomyces_cerevisiae_FostersO 0
Saccharomyces_cerevisiae_VL3 0
Saccharomyces_cerevisiae_AWRI796 0
Saccharomyces_cerevisiae_Sigma1278b 0
Saccharomyces_cerevisiae_W303 0
Saccharomyces_cerevisiae_JAY291 0
Saccharomyces_cerevisiae_AWRI1631 0
Saccharomyces_cerevisiae_YJM789_ 0
Saccharomyces_cerevisiae_YJM789 0
Saccharomyces_cerevisiae_RM11-1a 0
Saccharomyces_cerevisiae_RM11-1a_ 0
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   0
Schizosaccharomyces_pombe_972h-_ 0
Batrachochytrium_dendrobatidis_JEL423_ 0
Batrachochytrium_dendrobatidis_JAM81_ 0
Tropheryma_whipplei_str._Twist 0
Clavibacter_michiganensis_subsp._sepedonicus 1
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 1
Bifidobacterium_longum_NCC2705 0
Bifidobacterium_longum_DJO10A 0
Bifidobacterium_longum_subsp._infantis_157F 0
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 0
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 0
Bifidobacterium_longum_subsp._longum_KACC_91563 0
Bifidobacterium_longum_subsp._longum_BBMN68 0
Bifidobacterium_longum_subsp._longum_F8 0
Bifidobacterium_longum_subsp._longum_JCM_1217 0
Bifidobacterium_thermophilum_RBL67 2
Bifidobacterium_breve_UCC2003 0
Bifidobacterium_bifidum_PRL2010 0
Bifidobacterium_bifidum_BGN4 0
Ruminococcus_champanellensis_18P13 1
Clostridium_sp._SY8519 1
Clostridium_saccharobutylicum_DSM_13864 1
Clostridium_autoethanogenum_DSM_10061 1
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 1
Clostridium_kluyveri_NBRC_12016 1
Clostridium_perfringens_SM101 1
Clostridium_perfringens_str._13 1
Clostridium_pasteurianum_BC1 1
Clostridium_acetobutylicum_DSM_1731 1
Clostridium_acetobutylicum_EA_2018 1
Streptococcus_oligofermentans_AS_1.3089 1
Streptococcus_parasanguinis_FW213 1
Streptococcus_pneumoniae_A026 1
Streptococcus_pneumoniae_ST556 1
Streptococcus_pneumoniae_SPNA45 1
Streptococcus_pneumoniae_SPN994039 1
Streptococcus_pneumoniae_SPN994038 1
Streptococcus_pneumoniae_SPN034183 1
Streptococcus_pneumoniae_SPN034156 1
Streptococcus_pneumoniae_INV104 1
Streptococcus_pneumoniae_INV200 1
Streptococcus_pneumoniae_OXC141 1
Streptococcus_pneumoniae_gamPNI0373 1
Streptococcus_pneumoniae_AP200 1
Streptococcus_pneumoniae_ATCC_700669 1
Streptococcus_pneumoniae_TCH8431/19A 1
Streptococcus_pneumoniae_CGSP14 1
Streptococcus_pneumoniae_G54 1
Streptococcus_pneumoniae_JJA 1
Streptococcus_pneumoniae_70585 1
Streptococcus_pneumoniae_Hungary19A-6 1
Streptococcus_pneumoniae_Taiwan19F-14 1
Streptococcus_pneumoniae_D39 1
Streptococcus_pneumoniae_670-6B 1
Streptococcus_pneumoniae_R6 1
Streptococcus_pneumoniae_TIGR4 1
Fusobacterium_nucleatum_subsp._vincentii_3_1_36A2 1
Fusobacterium_nucleatum_subsp._animalis_4_8 1
Gluconobacter_oxydans_H24 1
Sulfolobus_acidocaldarius_SUSAZ 1
Sulfolobus_acidocaldarius_Ron12/I 1
Sulfolobus_acidocaldarius_N8 1

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Longest transcript per gene
Genome     Number
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   0

Others
Genome     Number
Moniliophthora_perniciosa_FA553__(Genome_survey) 1
NCBI_2017_08_genome 9483
TargetDB__(Targets) 1
Protein_Data_Bank_(all_PDB_sequenc) 4
STRING_v9.0.5_(STRING) 38
Uniprot_2018_03_genome 3147

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