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Domain combinations for 56112,48452 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

56112 - Protein kinase-like (PK-like)
48452 - TPR-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Mnemiopsis_leidyi   (Sea walnut)   0
Capsaspora_owczarzaki_ATCC_30864_ 0
Stereum_hirsutum_FP-91666_SS1__v1.0 0
Punctularia_strigosozonata_v1.0 0
Sebacina_vermifera_MAFF_305830_v1.0 0
Tulasnella_calospora_AL13/4D_v1.0 21
Stagonospora_nodorum_ 0
Penicillium_chrysogenum_Wisconsin_54-1255_ 0
Penicillium_chrysogenum_v1.0 0
Aspergillus_sydowii_v1.0 0
Aspergillus_versicolor_v1.0 0
Neosartorya_fischeri_NRRL_181_ 0
Aspergillus_terreus_NIH2624_ 0
Aspergillus_oryzae_RIB40_ 1
Aspergillus_flavus_NRRL3357_ 0
Allomyces_macrogynus_ATCC_38327_ 0
Dictyostelium_purpureum_ 0
Selaginella_moellendorffii_ 2
Pinus_taeda   (Loblolly pine)   1
Picea_abies   (Norway spruce)   1
Eucalyptus_grandis_v201   (Rose gum)   8
Theobroma_cacao_B97-61/B2_v1   (Cacao)   5
Gossypium_raimondii_v221 27
Citrus_clementina_v165 16
Citrus_sinensis_v154   (Sweet orange)   22
Thellungiella_halophila_v173 11
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   19
Capsella_rubella_v183 8
Arabidopsis_lyrata_   (Lyrate rockcress)   12
Arabidopsis_thaliana_10   (Thale cress)   14
Carica_papaya_   (Papaya)   7
Medicago_truncatula_   (Barrel medic)   13
Phaseolus_vulgaris_v186   (French bean)   6
Glycine_max_v109   (Soybean)   18
Cucumis_sativus_v122   (Cucumber)   26
Fragaria_vesca_   (Wild strawberry)   4
Malus_domestica_v196   (Apple)   9
Prunus_persica_v139   (Peach)   11
Linum_usitatissimum_v200   (Flax)   17
Manihot_esculenta_v147   (Cassava)   10
Populus_trichocarpa_v156   (Black cottonwood)   14
Vitis_vinifera_   (Wine grape)   7
Mimulus_guttatus_v140   (Spotted monkey flower)   8
Solanum_lycopersicum_v.2.3   (Tomato)   7
Solanum_tuberosum_   (Potato)   13
Actinidia_chinensis_Hongyang_ 13
Aquilegia_coerulea_v195 13
Triticum_urartu_22 5
Triticum_aestivum_22   (Bread wheat)   13
Aegilops_tauschii_22 4
Brachypodium_distachyon_   (Stiff brome)   6
Oryza_barthii_22   (African wild rice)   5
Oryza_meridionalis_22 4
Oryza_glumaepatula_22 4
Oryza_glaberrima   (African rice)   3
Oryza_punctata_22 4
Oryza_nivara_22 6
Oryza_brachyantha_22   (Malo sina)   5
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   7
Oryza_sativa_v193   (Rice)   7
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   6
Panicum_virgatum_v202   (Switchgrass)   6
Setaria_italica_v164   (Foxtail millet)   5
Zea_mays_subsp._mays_   (Maize)   12
Zea_mays_v181   (Maize)   12
Sorghum_bicolor_   (Sorghum)   4
Musa_balbisiana   (Balbis banana)   7
Musa_acuminata_22   (Wild Malaysian banana)   11
Amborella_trichopoda_22 5
Physcomitrella_patens 5
Cyanophora_paradoxa_ 0
Ectocarpus_siliculosus 0
Aureococcus_anophagefferens_ 0
Paramecium_tetraurelia_ 0
Tetrahymena_thermophila_SB210_1_ 8
Ichthyophthirius_multifiliis_strain_G5_ 0
Naegleria_gruberi_ 2
Guillardia_theta_CCMP2712_v1.0_ 1
Leptolyngbya_sp._PCC_7376 1
Pseudanabaena_sp._PCC_7367 2
Acaryochloris_marina_MBIC11017 3
Microcoleus_sp._PCC_7113 3
Trichodesmium_erythraeum_IMS101 1
Geitlerinema_sp._PCC_7407 1
Cyanothece_sp._PCC_8802 2
Halothece_sp._PCC_7418 1
Microcystis_aeruginosa_NIES-843 1
Rivularia_sp._PCC_7116 4
Calothrix_sp._PCC_7507 1
Anabaena_variabilis_ATCC_29413 2
'Nostoc_azollae'_0708 1
Nostoc_sp._PCC_7107 2
Nostoc_punctiforme_PCC_73102 2
Nostoc_sp._PCC_7120 1
Anabaena_sp._90 0
Thermobispora_bispora_DSM_43833 1
Catenulispora_acidiphila_DSM_44928 0
Stackebrandtia_nassauensis_DSM_44728 0
Frankia_symbiont_of_Datisca_glomerata 0
Frankia_sp._EAN1pec 1
Frankia_alni_ACN14a 1
Thermobifida_fusca_YX 2
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 0
Thermomonospora_curvata_DSM_43183 2
Streptosporangium_roseum_DSM_43021 0
Kitasatospora_setae_KM-6054 2
Streptomyces_coelicolor_A3(2) 1
Streptomyces_sp._PAMC26508 3
Streptomyces_flavogriseus_ATCC_33331 2
Streptomyces_sp._SirexAA-E 1
Streptomyces_griseus_subsp._griseus_NBRC_13350 1
Streptomyces_bingchenggensis_BCW-1 2
Streptomyces_violaceusniger_Tu_4113 0
Streptomyces_avermitilis_MA-4680 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Streptomyces_scabiei_87.22 1
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 3
Actinosynnema_mirum_DSM_43827 1
Saccharomonospora_viridis_DSM_43017 1
Saccharopolyspora_erythraea_NRRL_2338 1
Amycolatopsis_mediterranei_U32 0
Kribbella_flavida_DSM_17836 0
Microlunatus_phosphovorus_NM-1 0
Verrucosispora_maris_AB-18-032 0
Actinoplanes_sp._N902-109 0
Actinoplanes_sp._SE50/110 0
Actinoplanes_missouriensis_431 0
Segniliparus_rotundus_DSM_44985 0
Tsukamurella_paurometabola_DSM_20162 0
Gordonia_sp._KTR9 0
Gordonia_polyisoprenivorans_VH2 0
Gordonia_bronchialis_DSM_43247 0
Rhodococcus_jostii_RHA1 0
Rhodococcus_erythropolis_PR4 0
Nocardia_cyriacigeorgica_GUH-2 1
Nocardia_farcinica_IFM_10152 0
Amycolicicoccus_subflavus_DQS3-9A1 0
Mycobacterium_massiliense_str._GO_06 0
Mycobacterium_abscessus_ATCC_19977 0
Mycobacterium_sp._JLS 0
Mycobacterium_intracellulare_ATCC_13950 0
Mycobacterium_avium_104 0
Mycobacterium_canettii_CIPT_140010059 0
Mycobacterium_africanum_GM041182 0
Mycobacterium_tuberculosis_KZN_1435 0
Mycobacterium_tuberculosis 0
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 0
Mycobacterium_rhodesiae_NBB3 0
Mycobacterium_ulcerans_Agy99 0
Mycobacterium_gilvum_PYR-GCK 0
Mycobacterium_chubuense_NBB4 0
Mycobacterium_marinum_M 0
Corynebacterium_resistens_DSM_45100 0
Corynebacterium_aurimucosum_ATCC_700975 0
Corynebacterium_kroppenstedtii_DSM_44385 0
Corynebacterium_efficiens_YS-314 0
Corynebacterium_jeikeium_K411 0
Intrasporangium_calvum_DSM_43043 0
Cellulomonas_flavigena_DSM_20109 0
[Cellvibrio]_gilvus_ATCC_13127 0
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 0
Herpetosiphon_aurantiacus_DSM_785 1
Roseiflexus_sp._RS-1 1
Roseiflexus_castenholzii_DSM_13941 0
Chloroflexus_sp._MS-G 0
Chloroflexus_sp._Y-400-fl 0
Chloroflexus_aggregans_DSM_9485 0
Chloroflexus_aurantiacus_J-10-fl 0
Clostridium_thermocellum_ATCC_27405 1
Oscillibacter_valericigenes_Sjm18-20 0
Desulfotomaculum_carboxydivorans_CO-1-SRB 1
Eubacterium_limosum_KIST612 1
Syntrophothermus_lipocalidus_DSM_12680 0
Clostridium_cellulovorans_743B 0
Clostridium_acetobutylicum_ATCC_824 0
Tepidanaerobacter_acetatoxydans_Re1 1
Bacillus_cellulosilyticus_DSM_2522 0
Gemmatimonas_aurantiaca_T-27 0
Melioribacter_roseus_P3M 0
Flexibacter_litoralis_DSM_6794 0
Marivirga_tractuosa_DSM_4126 0
Spirosoma_linguale_DSM_74 0
Candidatus_Protochlamydia_amoebophila_UWE25 0
Parachlamydia_acanthamoebae_UV-7 0
Chlamydophila_caviae_GPIC 0
Isosphaera_pallida_ATCC_43644 0
Planctomyces_brasiliensis_DSM_5305 0
Planctomyces_limnophilus_DSM_3776 0
Rhodopirellula_baltica_SH_1 0
Opitutus_terrae_PB90-1 0
Akkermansia_muciniphila_ATCC_BAA-835 0
Thermanaerovibrio_acidaminovorans_DSM_6589 1
Candidatus_Chloracidobacterium_thermophilum_B 0
Candidatus_Solibacter_usitatus_Ellin6076 1
Granulicella_tundricola_MP5ACTX9 0
Granulicella_mallensis_MP5ACTX8 0
Candidatus_Koribacter_versatilis_Ellin345 2
Terriglobus_saanensis_SP1PR4 0
Acidobacterium_capsulatum_ATCC_51196 0
Desulfomonile_tiedjei_DSM_6799 0
Desulfatibacillum_alkenivorans_AK-01 0
Desulfobacterium_autotrophicum_HRM2 1
Desulfococcus_oleovorans_Hxd3 0
Haliangium_ochraceum_DSM_14365 0
Sorangium_cellulosum_'So_ce_56' 0
Anaeromyxobacter_sp._Fw109-5 0
Anaeromyxobacter_dehalogenans_2CP-1 0
Stigmatella_aurantiaca_DW4/3-1 1
Corallococcus_coralloides_DSM_2259 0
Myxococcus_xanthus_DK_1622 1
Myxococcus_fulvus_HW-1 0
Hyphomonas_neptunium_ATCC_15444 0
Cellvibrio_japonicus_Ueda107 0
Shewanella_denitrificans_OS217 0
Pseudoalteromonas_atlantica_T6c 0
Methylomicrobium_alcaliphilum 0
Rhodanobacter_denitrificans 0
Frateuria_aurantia_DSM_6220 0
Pseudoxanthomonas_spadix_BD-a59 0
Pseudoxanthomonas_suwonensis_11-1 0
Xanthomonas_axonopodis_pv._citri_str._306 0
Thiocystis_violascens_DSM_198 0
gamma_proteobacterium_HdN1 1
Escherichia_fergusonii_ATCC_35469 1
Pseudomonas_stutzeri_A1501 1
Pseudomonas_mendocina_ymp 1
Methanocella_conradii_HZ254 0
Methanocella_paludicola_SANAE 0
Methanoregula_boonei_6A8 1
Methanobrevibacter_ruminantium_M1 0

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Strains
Genome     Number
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   5
Hordeum_vulgare_22   (Domesticated barley)   4
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   3
Chroococcidiopsis_thermalis_PCC_7203 0
Chamaesiphon_minutus_PCC_6605 0
Dactylococcopsis_salina_PCC_8305 1
Synechococcus_sp._JA-2-3B'a(2-13) 0
Synechococcus_sp._JA-3-3Ab 0
Synechococcus_sp._PCC_7002 0
Crinalium_epipsammum_PCC_9333 0
Oscillatoria_nigro-viridis_PCC_7112 0
Oscillatoria_acuminata_PCC_6304 3
Arthrospira_platensis_NIES-39 0
Cyanothece_sp._PCC_7822 0
Cyanothece_sp._PCC_7425 1
Cyanothece_sp._PCC_7424 0
Cyanothece_sp._PCC_8801 2
Cyanobacterium_stanieri_PCC_7202 1
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 0
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 0
Stanieria_cyanosphaera_PCC_7437 1
Calothrix_parietina_Calothrix_sp._PCC_6303 1
Cylindrospermum_stagnale_PCC_7417 1
Anabaena_cylindrica_PCC_7122 0
Frankia_sp._CcI3 0
Nocardiopsis_alba_ATCC_BAA-2165 2
Streptomyces_albus_J1074 1
Streptomyces_rapamycinicus_NRRL_5491 0
Streptomyces_davawensis_JCM_4913 1
Streptomyces_fulvissimus_DSM_40593 1
Streptomyces_venezuelae_ATCC_10712 0
Streptomyces_collinus_Tu_365 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 2
Saccharothrix_espanaensis_DSM_44229 0
Amycolatopsis_mediterranei_RB 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_mediterranei_S699 0
Amycolatopsis_orientalis_HCCB10007 0
Actinoplanes_friuliensis_DSM_7358 0
Rhodococcus_pyridinivorans_SB3094 0
Rhodococcus_erythropolis_CCM2595 0
Nocardia_brasiliensis_ATCC_700358 0
Mycobacterium_sp._MOTT36Y 0
Mycobacterium_sp._JDM601 0
Mycobacterium_abscessus_subsp._bolletii_50594 0
Mycobacterium_liflandii_128FXT 0
Mycobacterium_sp._KMS 0
Mycobacterium_sp._MCS 0
Mycobacterium_yongonense_05-1390 0
Mycobacterium_intracellulare_MOTT-64 0
Mycobacterium_indicus_pranii_MTCC_9506 0
Mycobacterium_intracellulare_MOTT-02 0
Mycobacterium_avium_subsp._paratuberculosis_MAP4 0
Mycobacterium_avium_subsp._paratuberculosis_K-10 0
Mycobacterium_canettii_CIPT_140070017 0
Mycobacterium_canettii_CIPT_140060008 0
Mycobacterium_canettii_CIPT_140070008 0
Mycobacterium_canettii_CIPT_140070010 0
Mycobacterium_tuberculosis_EAI5/NITR206 0
Mycobacterium_tuberculosis_EAI5 0
Mycobacterium_tuberculosis_str._Beijing/NITR203 0
Mycobacterium_tuberculosis_UT205 0
Mycobacterium_tuberculosis_CTRI-2 0
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 0
Mycobacterium_tuberculosis_KZN_605 0
Mycobacterium_tuberculosis_KZN_4207 0
Mycobacterium_tuberculosis_CCDC5180 1
Mycobacterium_tuberculosis_CCDC5079 0
Mycobacterium_tuberculosis_CCDC5079 0
Mycobacterium_tuberculosis_H37Ra 0
Mycobacterium_tuberculosis_str._Haarlem 0
Mycobacterium_tuberculosis_F11 0
Mycobacterium_tuberculosis_H37Rv 0
Mycobacterium_tuberculosis_CDC1551 0
Mycobacterium_bovis_AF2122/97 0
Mycobacterium_bovis_BCG_str._Korea_1168P 0
Mycobacterium_bovis_BCG_str._Mexico 0
Mycobacterium_bovis_BCG_str._Tokyo_172 0
Mycobacterium_gilvum_Spyr1 0
Mycobacterium_kansasii_ATCC_12478 0
Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 0
Corynebacterium_glutamicum_MB001 0
Corynebacterium_glutamicum_ATCC_13032 0
Corynebacterium_glutamicum_ATCC_13032 0
Corynebacterium_glutamicum_ATCC_13032 0
Corynebacterium_diphtheriae_VA01 0
Corynebacterium_diphtheriae_HC04 0
Corynebacterium_diphtheriae_HC01 0
Corynebacterium_diphtheriae_241 0
Chthonomonas_calidirosea_T49 1
Faecalibacterium_prausnitzii_L2-6 0
Clostridium_acetobutylicum_DSM_1731 0
Clostridium_acetobutylicum_EA_2018 1
Singulisphaera_acidiphila_DSM_18658 0
Sorangium_cellulosum_So0157-2 0
Anaeromyxobacter_sp._K 0
Anaeromyxobacter_dehalogenans_2CP-C 0
Myxococcus_stipitatus_DSM_14675 1
Glaciecola_psychrophila_170 0
Alteromonas_macleodii_str._'English_Channel_673' 0
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 0
Alteromonas_macleodii_str._'Black_Sea_11' 0
Xanthomonas_citri_subsp._citri_Aw12879 0
Xanthomonas_campestris_pv._vesicatoria_str._85-10 0
Xanthomonas_axonopodis_pv._citrumelo_F1 0
Xanthomonas_axonopodis_Xac29-1 0
Klebsiella_pneumoniae_KCTC_2242 1
Escherichia_coli_LY180 1
Escherichia_coli_O7:K1_str._CE10 1
Escherichia_coli_KO11FL 1
Escherichia_coli_KO11FL 1
Escherichia_coli_W 1
Escherichia_coli_W 1
Pseudomonas_stutzeri_CCUG_29243 1
Pseudomonas_stutzeri_DSM_4166 1
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 1
Pseudomonas_aeruginosa_LES431 1
Pseudomonas_aeruginosa_LESB58 1
Methanoregula_formicica_Methanoregula_formicicum_SMSP 0

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Longest transcript per gene
Genome     Number
Arabidopsis_thaliana_10   (Thale cress)   12

Others
Genome     Number
Lotus_japonicus__(Early_assembly) 3
Malus_x_domestica_(Duplicate)   (Apple)   9
Ricinus_communis__(Early_assembly)   (Castor bean)   6
Nicotiana_benthamiana_0.4.4_(Early_draft) 13
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   6
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   7
Phoenix_dactylifera__(Early_draft)   (Date palm)   3
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 0
NCBI_plasmid_sequences_(Plasmids) 5
Protein_Data_Bank_(all_PDB_sequenc) 0
TargetDB__(Targets) 17
STRING_v9.0.5_(STRING) 116
Uniprot_2018_03_genome 6534
NCBI_2017_08_genome 3340

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