SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 56112,49354 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

56112 - Protein kinase-like (PK-like)
49354 - PapD-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Pristionchus_pacificus_ 1
Triticum_urartu_22 4
Triticum_aestivum_22   (Bread wheat)   8
Aegilops_tauschii_22 11
Brachypodium_distachyon_   (Stiff brome)   0
Oryza_barthii_22   (African wild rice)   2
Oryza_meridionalis_22 0
Oryza_glumaepatula_22 0
Oryza_glaberrima   (African rice)   1
Oryza_punctata_22 0
Oryza_nivara_22 1
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   2
Oryza_sativa_v193   (Rice)   2
Panicum_virgatum_v202   (Switchgrass)   2
Setaria_italica_v164   (Foxtail millet)   0
Zea_mays_subsp._mays_   (Maize)   1
Zea_mays_v181   (Maize)   1
Sorghum_bicolor_   (Sorghum)   2

Strains
Genome     Number
Hordeum_vulgare_22   (Domesticated barley)   10
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0

Others
Genome     Number
STRING_v9.0.5_(STRING) 5
NCBI_2017_08_genome 26
Uniprot_2018_03_genome 255

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