SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 56214,56214,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

56214 - 4'-phosphopantetheinyl transferase
56214 - 4'-phosphopantetheinyl transferase

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   1
Pan_troglodytes_76_2.1.4   (Chimpanzee)   1
Pongo_abelii_76_2   (Sumatran orangutan)   1
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   1
Papio_anubis_76   (Olive baboon)   2
Macaca_mulatta_76_1   (Rhesus monkey)   1
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   1
Otolemur_garnettii_76_3   (Small-eared galago)   1
Rattus_norvegicus_76_5.0   (Norway rat)   1
Mus_musculus_76_38   (House mouse)   1
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   2
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1
Cavia_porcellus_76_3   (Domestic guinea pig)   1
Oryctolagus_cuniculus_76_2   (Rabbit)   1
Tupaia_belangeri_76   (Northern tree shrew)   1
Sus_scrofa_76_10.2   (Pig)   1
Bos_taurus_76_3.1   (Cattle)   2
Ovis_aries_76_3.1   (Sheep)   1
Vicugna_pacos_76_1   (Alpaca)   1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   1
Mustela_putorius_furo_76_1.0   (Domestic ferret)   1
Ailuropoda_melanoleuca_76_1   (Giant panda)   1
Canis_familiaris_76_3.1   (Dog)   1
Felis_catus_76_6.2   (Domestic cat)   1
Equus_caballus_76_2   (Horse)   1
Myotis_lucifugus_76_2.0   (Little brown bat)   1
Pteropus_vampyrus_76_1   (Large flying fox)   1
Erinaceus_europaeus_76   (Western European hedgehog)   1
Loxodonta_africana_76_3   (African savanna elephant)   2
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   1
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1
Saccoglossus_kowalevskii_v3.0 1
Petromyzon_marinus_76_7.0   (Sea lamprey)   1
Meleagris_gallopavo_76_2   (Turkey)   1
Gallus_gallus_76_4   (Chicken)   1
Anas_platyrhynchos_76_1.0   (Mallard)   1
Ficedula_albicollis_76_1.0   (Collared flycatcher)   1
Anolis_carolinensis_76_2.0   (Green anole)   1
Xenopus_laevis_   (African clawed frog)   3
Lepisosteus_oculatus_76   (Spotted gar)   2
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   1
Takifugu_rubripes_76_4   (Torafugu)   1
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   1
Oryzias_latipes_76_1   (Japanese medaka)   2
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   1
Poecilia_formosa_76   (Amazon molly)   1
Oreochromis_niloticus_76_1.0   (Nile tilapia)   1
Astyanax_mexicanus_76   (Mexican tetra)   1
Danio_rerio_76_9   (Zebrafish)   1
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   1
Ciona_intestinalis_76   (Vase tunicate)   1
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   2
Adineta_vaga 1
Octopus_bimaculoides_280 1
Capitella_sp._I_ 1
Heliconius_melpomene_   (Postman butterfly)   1
Nasonia_vitripennis_   (Jewel wasp)   1
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   1
Linepithema_humile_v1.1   (Argentine ant)   1
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   1
Solenopsis_invicta_v.2.2.3   (Red fire ant)   1
Atta_cephalotes_v1.1 1
Camponotus_floridanus_v3.3   (Florida carpenter ant)   1
Drosophila_pseudoobscura_2.13 1
Drosophila_melanogaster_76_5   (Fruit fly)   1
Drosophila_virilis_1.2 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   1
Anopheles_gambiae_49_3j   (African malaria mosquito)   1
Tribolium_castaneum_3.0   (Red flour beetle)   0
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   0
Rhodnius_prolixus_22 1
Strigamia_maritima_22 1
Sarcoptes_scabiei 1
Tetranychus_urticae_   (Two-spotted spider mite)   1
Pristionchus_pacificus_ 1
Meloidogyne_incognita_   (Southern root-knot nematode)   1
Meloidogyne_hapla_ 0
Onchocerca_volvulus_22 1
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   1
Caenorhabditis_brenneri_ 2
Caenorhabditis_remanei_ 2
Caenorhabditis_elegans_76_235   (Roundworm)   2
Caenorhabditis_briggsae_2 2
Trichinella_spiralis_22 0
Hymenolepis_microstoma_ 1
Echinococcus_multilocularis_ 1
Echinococcus_granulosus_ 1
Taenia_solium_   (Pork tapeworm)   1
Schistosoma_mansoni_ 1
Nematostella_vectensis_1.0   (Starlet sea anemone)   1
Amphimedon_queenslandica 1
Trichoplax_adhaerens_ 1
Sphaeroforma_arctica_JP610_ 1
Malassezia_globosa_CBS_7966_ 2
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 1
Melampsora_laricis-populina_ 1
Rhodotorula_graminis_WP1_v1.0 1
Microbotryum_violaceum_22 0
Wallemia_sebi_v1.0 1
Tulasnella_calospora_AL13/4D_v1.0 1
Postia_placenta_ 1
Daldinia_eschscholzii_EC12_v1.0 1
Sclerotinia_sclerotiorum_ 1
Aspergillus_glaucus 1
Dekkera_bruxellensis_CBS_2499_v2.0 1
Candida_tanzawaensis_NRRL_Y-17324__v1.0 1
Candida_dubliniensis_CD36_ 1
Candida_tropicalis_MYA-3404_ 1
Candida_parapsilosis_ 1
Candida_albicans_SC5314 1
Lodderomyces_elongisporus_NRRL_YB-4239_ 0
Babjeviella_inositovora_NRRL_Y-12698_v1.0 1
Pichia_stipitis_CBS_6054_ 1
Debaromyces_hansenii 1
Yarrowia_lipolytica_CLIB122 1
Candida_lusitaniae_ATCC_42720_ 1
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1
Kluyveromyces_lactis 1
Schizosaccharomyces_cryophilus_OY26_22 1
Allomyces_macrogynus_ATCC_38327_ 0
Spizellomyces_punctatus_DAOM_BR117_ 0
Dictyostelium_discoideum 1
Dictyostelium_purpureum_ 1
Selaginella_moellendorffii_ 2
Picea_abies   (Norway spruce)   0
Eucalyptus_grandis_v201   (Rose gum)   4
Theobroma_cacao_B97-61/B2_v1   (Cacao)   1
Gossypium_raimondii_v221 2
Citrus_clementina_v165 1
Citrus_sinensis_v154   (Sweet orange)   2
Arabidopsis_thaliana_10   (Thale cress)   0
Carica_papaya_   (Papaya)   1
Medicago_truncatula_   (Barrel medic)   5
Phaseolus_vulgaris_v186   (French bean)   1
Glycine_max_v109   (Soybean)   1
Cucumis_sativus_v122   (Cucumber)   1
Fragaria_vesca_   (Wild strawberry)   1
Malus_domestica_v196   (Apple)   1
Prunus_persica_v139   (Peach)   2
Linum_usitatissimum_v200   (Flax)   2
Manihot_esculenta_v147   (Cassava)   1
Populus_trichocarpa_v156   (Black cottonwood)   2
Vitis_vinifera_   (Wine grape)   2
Mimulus_guttatus_v140   (Spotted monkey flower)   2
Solanum_lycopersicum_v.2.3   (Tomato)   1
Actinidia_chinensis_Hongyang_ 1
Aquilegia_coerulea_v195 3
Triticum_urartu_22 1
Triticum_aestivum_22   (Bread wheat)   0
Aegilops_tauschii_22 1
Brachypodium_distachyon_   (Stiff brome)   0
Oryza_barthii_22   (African wild rice)   2
Oryza_meridionalis_22 1
Oryza_glumaepatula_22 0
Oryza_punctata_22 1
Oryza_nivara_22 0
Oryza_brachyantha_22   (Malo sina)   2
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   1
Oryza_sativa_v193   (Rice)   1
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   0
Panicum_virgatum_v202   (Switchgrass)   0
Setaria_italica_v164   (Foxtail millet)   3
Zea_mays_subsp._mays_   (Maize)   0
Zea_mays_v181   (Maize)   0
Sorghum_bicolor_   (Sorghum)   0
Musa_acuminata_22   (Wild Malaysian banana)   1
Amborella_trichopoda_22 2
Coccomyxa_subellipsoidea_sp._C-169_v2 0
Chlorella_variabilis_sp._NC64A_ 1
Chlorella_vulgaris_ 1
Volvox_carteri_f._nagariensis_ 0
Volvox_carteri_v199 0
Chlamydomonas_reinhardtii_4.0 0
Ostreococcus_sp._RCC809_ 1
Ostreococcus_lucimarinus_CCE9901_ 1
Ostreococcus_tauri_ 1
Micromonas_sp._RCC299_ 1
Bigelowiella_natans_CCMP2755_22 1
Ectocarpus_siliculosus 0
Aureococcus_anophagefferens_ 1
Pythium_arrhenomanes_ATCC_12531_22 1
Pythium_ultimum_v1.7-2 1
Pythium_aphanidermatum_DAOM_BR444_22 0
Pythium_irregulare_DAOM_BR486_22 1
Pythium_vexans_DAOM_BR484_22 1
Phytophthora_ramorum_1.1   (Sudden oak death agent)   1
Phytophthora_sojae_1.1 1
Cryptosporidium_parvum_Iowa_II 1
Symbiodinium_minutum_clade_B1_v1.2 0
Guillardia_theta_CCMP2712_v1.0_ 1
Acidothermus_cellulolyticus_11B 1
Blastococcus_saxobsidens_DD2 1
Frankia_sp._EAN1pec 0
Frankia_alni_ACN14a 0
Streptomyces_scabiei_87.22 1
Verrucosispora_maris_AB-18-032 1
Ralstonia_eutropha_H16 1
Nitrosospira_multiformis_ATCC_25196 1
Mesorhizobium_sp._BNC1 1
Hyphomicrobium_sp._MC1 1
Vibrio_splendidus_LGP32 1
Shewanella_piezotolerans_WP3 1
Shewanella_loihica_PV-4 1
Shewanella_halifaxensis_HAW-EB4 1
Shewanella_sediminis_HAW-EB3 1
Shewanella_denitrificans_OS217 1
Shewanella_pealeana_ATCC_700345 1
Shewanella_oneidensis_MR-1 1
Shewanella_baltica_OS185 0
Shewanella_sp._MR-4 1
Shewanella_frigidimarina_NCIMB_400 1
Shewanella_putrefaciens_CN-32 1
Marinobacter_sp._BSs20148 1
Methylococcus_capsulatus_str._Bath 1

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   2
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   1
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   1
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   1
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   2
Paracoccidioides_brasiliensis_Pb03_ 1
Candida_albicans_WO-1_ 1
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   2
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   1
Frankia_sp._CcI3 0
Shewanella_sp._W3-18-1 1
Shewanella_sp._ANA-3 1
Shewanella_baltica_BA175 1
Shewanella_baltica_OS678 0
Shewanella_baltica_OS117 1
Shewanella_baltica_OS223 0
Shewanella_baltica_OS195 0
Shewanella_baltica_OS155 1
Shewanella_sp._MR-7 1
Shewanella_putrefaciens_200 1

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   1
Pan_troglodytes_69_2.1.4   (Chimpanzee)   1
Pongo_abelii_69_2   (Sumatran orangutan)   1
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   1
Macaca_mulatta_69_1   (Rhesus monkey)   1
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   1
Otolemur_garnettii_69_3   (Small-eared galago)   1
Rattus_norvegicus_69_3.4   (Norway rat)   1
Mus_musculus_69_38   (House mouse)   1
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   2
Cavia_porcellus_69_3   (Domestic guinea pig)   1
Oryctolagus_cuniculus_69_2   (Rabbit)   1
Tupaia_belangeri_69   (Northern tree shrew)   1
Sus_scrofa_69_10.2   (Pig)   1
Bos_taurus_69_3.1   (Cattle)   2
Vicugna_pacos_69_1   (Alpaca)   1
Tursiops_truncatus_69_1   (Bottlenose dolphin)   1
Mustela_putorius_furo_69_1.0   (Domestic ferret)   1
Ailuropoda_melanoleuca_69_1   (Giant panda)   1
Canis_familiaris_69_3.1   (Dog)   1
Equus_caballus_69_2   (Horse)   1
Myotis_lucifugus_69_2.0   (Little brown bat)   1
Pteropus_vampyrus_69_1   (Large flying fox)   1
Erinaceus_europaeus_69   (Western European hedgehog)   1
Loxodonta_africana_69_3   (African savanna elephant)   1
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   1
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   1
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1
Petromyzon_marinus_69_7.0   (Sea lamprey)   1
Meleagris_gallopavo_69_2   (Turkey)   1
Gallus_gallus_69_2   (Chicken)   1
Anolis_carolinensis_69_2.0   (Green anole)   1
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   1
Takifugu_rubripes_69_4   (Torafugu)   1
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   1
Oryzias_latipes_69_1   (Japanese medaka)   1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   1
Oreochromis_niloticus_69_1.0   (Nile tilapia)   1
Danio_rerio_69_9   (Zebrafish)   1
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   1
Ciona_intestinalis_69   (Vase tunicate)   1
Drosophila_melanogaster_69_5   (Fruit fly)   1
Caenorhabditis_elegans_69_215   (Roundworm)   2
Arabidopsis_thaliana_10   (Thale cress)   0

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   1
Homo_sapiens__(NCBI_version)   (Human)   1
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   1
Heliconius_numata__(Incomplete) 1
Loa_loa_v3.3_(Request)   (Eye worm)   1
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   0
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   0
Lotus_japonicus__(Early_assembly) 1
Malus_x_domestica_(Duplicate)   (Apple)   1
Ricinus_communis__(Early_assembly)   (Castor bean)   2
Nicotiana_benthamiana_0.4.4_(Early_draft) 2
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   1
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   1
STRING_v9.0.5_(STRING) 82
Uniprot_2018_03_genome 4075
NCBI_2017_08_genome 1152
TargetDB__(Targets) 1
Protozoadb_2010_08_(Protozoadb) 2

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