SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 56672,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

56672 - DNA/RNA polymerases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   2
Pan_troglodytes_76_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_76_3.1   (Western gorilla)   0
Pongo_abelii_76_2   (Sumatran orangutan)   1
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   0
Papio_anubis_76   (Olive baboon)   0
Macaca_mulatta_76_1   (Rhesus monkey)   2
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   0
Otolemur_garnettii_76_3   (Small-eared galago)   0
Microcebus_murinus_76_1   (Gray mouse lemur)   2
Rattus_norvegicus_76_5.0   (Norway rat)   1
Mus_musculus_76_38   (House mouse)   0
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   0
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   0
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1
Cavia_porcellus_76_3   (Domestic guinea pig)   1
Oryctolagus_cuniculus_76_2   (Rabbit)   4
Ochotona_princeps_76   (American pika)   1
Tupaia_belangeri_76   (Northern tree shrew)   0
Sus_scrofa_76_10.2   (Pig)   0
Bos_taurus_76_3.1   (Cattle)   0
Ovis_aries_76_3.1   (Sheep)   4
Vicugna_pacos_76_1   (Alpaca)   0
Tursiops_truncatus_76_1   (Bottlenose dolphin)   1
Mustela_putorius_furo_76_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_76_1   (Giant panda)   0
Canis_familiaris_76_3.1   (Dog)   0
Felis_catus_76_6.2   (Domestic cat)   0
Equus_caballus_76_2   (Horse)   56
Myotis_lucifugus_76_2.0   (Little brown bat)   0
Pteropus_vampyrus_76_1   (Large flying fox)   0
Sorex_araneus_76_1   (European shrew)   0
Erinaceus_europaeus_76   (Western European hedgehog)   0
Procavia_capensis_76_1   (Cape rock hyrax)   0
Loxodonta_africana_76_3   (African savanna elephant)   1
Echinops_telfairi_76   (Small Madagascar hedgehog)   1
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   0
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   0
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   0
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   18
Ornithorhynchus_anatinus_76_5   (Platypus)   1
Saccoglossus_kowalevskii_v3.0 2
Petromyzon_marinus_76_7.0   (Sea lamprey)   0
Meleagris_gallopavo_76_2   (Turkey)   1
Gallus_gallus_76_4   (Chicken)   0
Anas_platyrhynchos_76_1.0   (Mallard)   0
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   0
Ficedula_albicollis_76_1.0   (Collared flycatcher)   0
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   6
Anolis_carolinensis_76_2.0   (Green anole)   21
Xenopus_laevis_   (African clawed frog)   1
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   1
Latimeria_chalumnae_76_1   (Coelacanth)   16
Lepisosteus_oculatus_76   (Spotted gar)   2
Gadus_morhua_76_1   (Atlantic cod)   0
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   1
Takifugu_rubripes_76_4   (Torafugu)   1
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   2
Oryzias_latipes_76_1   (Japanese medaka)   1
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   1
Poecilia_formosa_76   (Amazon molly)   0
Oreochromis_niloticus_76_1.0   (Nile tilapia)   3
Astyanax_mexicanus_76   (Mexican tetra)   1
Danio_rerio_76_9   (Zebrafish)   2
Oikopleura_dioica 5
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   0
Ciona_intestinalis_76   (Vase tunicate)   1
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   21
Adineta_vaga 0
Octopus_bimaculoides_280 1
Lottia_gigantea_   (Owl limpet)   3
Helobdella_robusta_ 1
Capitella_sp._I_ 3
Danaus_plexippus_OGS1.0   (Monarch butterfly)   7
Heliconius_melpomene_   (Postman butterfly)   0
Bombyx_mori_   (Domestic silkworm)   22
Nasonia_vitripennis_   (Jewel wasp)   15
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   1
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   1
Linepithema_humile_v1.1   (Argentine ant)   1
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   1
Solenopsis_invicta_v.2.2.3   (Red fire ant)   0
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   0
Atta_cephalotes_v1.1 0
Camponotus_floridanus_v3.3   (Florida carpenter ant)   0
Lucilia_cuprina   (Australian sheep blowfly)   0
Drosophila_grimshawi_1.3 0
Drosophila_willistoni_1.3 1
Drosophila_pseudoobscura_2.13 7
Drosophila_persimilis_1.3 0
Drosophila_suzukii 0
Drosophila_yakuba_1.3 3
Drosophila_simulans_1.3 1
Drosophila_sechellia_1.3 2
Drosophila_melanogaster_76_5   (Fruit fly)   0
Drosophila_erecta_1.3 1
Drosophila_ananassae_1.3 2
Drosophila_virilis_1.2 1
Drosophila_mojavensis_1.3 2
Megaselia_scalaris_22 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   0
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   1
Anopheles_darlingi_22   (American malaria mosquito)   1
Anopheles_gambiae_49_3j   (African malaria mosquito)   0
Tribolium_castaneum_3.0   (Red flour beetle)   15
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   1
Acyrthosiphon_pisum_   (Pea aphid)   5
Rhodnius_prolixus_22 1
Daphnia_pulex_   (Common water flea)   1
Strigamia_maritima_22 5
Sarcoptes_scabiei 0
Tetranychus_urticae_   (Two-spotted spider mite)   0
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   4
Pristionchus_pacificus_ 3
Meloidogyne_incognita_   (Southern root-knot nematode)   3
Meloidogyne_hapla_ 2
Onchocerca_volvulus_22 1
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   0
Caenorhabditis_japonica_ 12
Caenorhabditis_brenneri_ 3
Caenorhabditis_remanei_ 6
Caenorhabditis_elegans_76_235   (Roundworm)   0
Caenorhabditis_briggsae_2 3
Trichinella_spiralis_22 7
Hymenolepis_microstoma_ 4
Echinococcus_multilocularis_ 0
Echinococcus_granulosus_ 1
Taenia_solium_   (Pork tapeworm)   1
Schistosoma_mansoni_ 0
Mnemiopsis_leidyi   (Sea walnut)   13
Thelohanellus_kitauei 10
Acropora_digitifera_v1.0 20
Nematostella_vectensis_1.0   (Starlet sea anemone)   1
Hydra_vulgaris 14
Amphimedon_queenslandica 9
Trichoplax_adhaerens_ 0
Proterospongia_sp._ATCC_50818_ 0
Monosiga_brevicollis_ 3
Sphaeroforma_arctica_JP610_ 3
Capsaspora_owczarzaki_ATCC_30864_ 0
Conidiobolus_coronatus_NRRL28638_v1.0 0
Mortierella_verticillata_NRRL_6337_ 1
Phycomyces_blakesleeanus_ 3
Rhizopus_oryzae_RA_99-880_ 39
Mucor_circinelloides_ 0
Rhizomucor_miehei_CAU432_ 0
Malassezia_globosa_CBS_7966_ 0
Sporisorium_reilianum_22 2
Ustilago_maydis_ 1
Mixia_osmundae_IAM_14324_v1.0 1
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 0
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 0
Melampsora_laricis-populina_ 0
Rhodotorula_graminis_WP1_v1.0 0
Sporobolomyces_roseus_IAM_13481_ 0
Microbotryum_violaceum_22 0
Wallemia_sebi_v1.0 0
Sphaerobolus_stellatus_v1.0 3
Piloderma_croceum_F_1598_v1.0 2
Serpula_lacrymans_var._lacrymans_S7.9_ 0
Coniophora_puteana 0
Hydnomerulius_pinastri_v2.0 0
Paxillus_rubicundulus_Ve08.2h10_v1.0 0
Pisolithus_microcarpus_441_v1.0 6
Pisolithus_tinctorius_Marx_270_v1.0 1
Scleroderma_citrinum_Foug_A_v1.0 3
Coprinopsis_cinerea_okayama7_130_v3 0
Pleurotus_ostreatus_   (Oyster mushroom)   0
Amanita_thiersii_Skay4041_v1.0 0
Amanita_muscaria_Koide_v1.0   (Fly agaric)   2
Galerina_marginata_v1.0 2
Hebeloma_cylindrosporum_h7_v2.0 0
Laccaria_bicolor_S238N-H82_ 0
Agaricus_bisporus_var._bisporus_ 0
Schizophyllum_commune_ 0
Stereum_hirsutum_FP-91666_SS1__v1.0 0
Heterobasidion_annosum_ 0
Gloeophyllum_trabeumv1.0 0
Punctularia_strigosozonata_v1.0 0
Sebacina_vermifera_MAFF_305830_v1.0 0
Fomitiporia_mediterranea_v1.0 0
Tulasnella_calospora_AL13/4D_v1.0 1
Postia_placenta_ 0
Wolfiporia_cocos_MD-104_SS10__v1.0 0
Fomitopsis_pinicolav1.0 0
Fomitopsis_pinicola_FP-58527_SS1_v3.0 0
Phanerochaete_chrysosporium_RP-78_2.1 4
Dichomitus_squalens 1
Trametes_versicolor_v1.0 0
Tremella_mesenterica_   (Witches' butter)   0
Daldinia_eschscholzii_EC12_v1.0 2
Apiospora_montagnei_NRRL_25634_v1.0 2
Magnaporthe_poae_ATCC_64411_22 2
Magnaporthe_grisea_70-15_ 1
Podospora_anserina_ 3
Sporotrichum_thermophile_ATCC_42464_ 1
Thielavia_terrestris_NRRL_8126_ 0
Chaetomium_globosum_CBS_148.51_ 14
Neurospora_tetrasperma_ 1
Neurospora_discreta_FGSC_8579_ 1
Neurospora_crassa_OR74A_ 1
Cryphonectria_parasitica_   (Chestnut blight fungus)   1
Verticillium_albo-atrum_VaMs.102_ 2
Verticillium_dahliae_VdLs.17_ 1
Acremonium_alcalophilumv_1.0 1
Glomerella_graminicola_22 0
Fusarium_graminearum_ 1
Nectria_haematococca_mpVI_ 1
Fusarium_oxysporum_f._sp._lycopersici_4286_ 1
Fusarium_verticillioides_7600_ 1
Trichoderma_asperellum_CBS_433.97_v1.0 1
Trichoderma_atroviride_ 1
Trichoderma_citrinoviride_v1.0 1
Trichoderma_reesei_1.2 1
Trichoderma_virens_Gv29-8_ 1
Trichoderma_longibrachiatum_ATCC_18648_v1.0 1
Trichoderma_harzianum_CBS_226.95_v1.0 1
Amorphotheca_resinae_v1.0   (Creosote fungus)   1
Botrytis_cinerea_B05.10_ 0
Sclerotinia_sclerotiorum_ 2
Blumeria_graminis_22 4
Didymella_exigua_CBS_183.55_v1.0 1
Leptosphaeria_maculans_22 1
Setosphaeria_turcica_v1.0 1
Cochliobolus_miyabeanus_ATCC_44560_v1.0 1
Cochliobolus_victoriae_FI3_v1.0 1
Cochliobolus_carbonum_26-R-13_v1.0 1
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   1
Alternaria_brassicicola_ 1
Cochliobolus_lunatus_m118_v2.0 1
Pyrenophora_teres_f._teres_22 5
Pyrenophora_tritici-repentis_ 0
Stagonospora_nodorum_ 1
Mycosphaerella_graminicola_IPO323_ 1
Zasmidium_cellare_ATCC_36951_v1.0 1
Dothistroma_septosporum 1
Septoria_musiva_v1.0 1
Mycosphaerella_fijiensis_CIRAD86_ 3
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 1
Paracoccidioides_brasiliensis_Pb18_ 1
Coccidioides_posadasii_RMSCC_3488_ 1
Coccidioides_immitis_RS_ 3
Ajellomyces_dermatitidis_SLH14081_ 1
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1
Microsporum_canis_CBS_113480_ 1
Trichophyton_equinum_CBS_127.97_ 1
Trichophyton_verrucosum_HKI_0517_ 1
Arthroderma_benhamiae_CBS_112371_ 1
Trichophyton_tonsurans_CBS_112818_ 1
Trichophyton_rubrum_CBS_118892_ 1
Uncinocarpus_reesii_1704_ 1
Aspergillus_zonatus_v1.0 1
Penicillium_chrysogenum_Wisconsin_54-1255_ 3
Penicillium_chrysogenum_v1.0 1
Aspergillus_acidus_v1.0 1
Aspergillus_fumigatus_Af293 1
Aspergillus_brasiliensis_v1.0 1
Aspergillus_nidulans_FGSC_A4_ 1
Aspergillus_sydowii_v1.0 1
Aspergillus_versicolor_v1.0 1
Aspergillus_glaucus 1
Aspergillus_carbonarius_ITEM_5010_ 1
Neosartorya_fischeri_NRRL_181_ 1
Aspergillus_terreus_NIH2624_ 0
Aspergillus_tubingensis_v1.0 1
Aspergillus_wentii_v1.0 1
Aspergillus_oryzae_RIB40_ 1
Aspergillus_niger_22 1
Aspergillus_niger_ATCC_1015_ 1
Aspergillus_flavus_NRRL3357_ 1
Aspergillus_clavatus_NRRL_1_ 1
Penicillium_marneffei_ATCC_18224_ 2
Tuber_melanosporum_Mel28_22 0
Tuber_melanosporum_Vittad_   (Perigord truffle)   27
Hansenula_polymorpha_v2.0 1
Dekkera_bruxellensis_CBS_2499_v2.0 0
Pichia_membranifaciensv1.0 0
Candida_tanzawaensis_NRRL_Y-17324__v1.0 0
Candida_dubliniensis_CD36_ 1
Candida_tropicalis_MYA-3404_ 0
Candida_parapsilosis_ 0
Candida_albicans_SC5314 0
Lodderomyces_elongisporus_NRRL_YB-4239_ 2
Babjeviella_inositovora_NRRL_Y-12698_v1.0 0
Pichia_stipitis_CBS_6054_ 0
Candida_guilliermondii_ATCC_6260_ 0
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 0
Debaromyces_hansenii 0
Wickerhamomyces_anomalus 0
Pichia_pastoris_GS115_ 0
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 0
Yarrowia_lipolytica_CLIB122 0
Candida_lusitaniae_ATCC_42720_ 1
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 0
Vanderwaltozyma_polyspora_DSM_70294_ 2
Candida_glabrata_CBS138 0
Kluyveromyces_thermotolerans_CBS_6340 0
Lachancea_kluyveri_ 0
Kluyveromyces_waltii 0
Ashbya_gossypii_ATCC_10895_ 0
Zygosaccharomyces_rouxii_ 0
Saccharomyces_mikatae_MIT 0
Saccharomyces_paradoxus_MIT 0
Saccharomyces_cerevisiae_76   (Baker's yeast)   0
Saccharomyces_bayanus_MIT 0
Kluyveromyces_lactis 0
Schizosaccharomyces_cryophilus_OY26_22 0
Schizosaccharomyces_octosporus_yFS286_ 0
Schizosaccharomyces_japonicus_yFS275_ 0
Schizosaccharomyces_pombe   (Fission yeast)   1
Catenaria_anguillulae_PL171_v1.0 1
Allomyces_macrogynus_ATCC_38327_ 0
Spizellomyces_punctatus_DAOM_BR117_ 0
Dictyostelium_discoideum 19
Dictyostelium_purpureum_ 1
Entamoeba_dispar_1.2 0
Entamoeba_invadens_1.2 0
Selaginella_moellendorffii_ 0
Pinus_taeda   (Loblolly pine)   3
Picea_abies   (Norway spruce)   6
Eucalyptus_grandis_v201   (Rose gum)   0
Theobroma_cacao_B97-61/B2_v1   (Cacao)   84
Gossypium_raimondii_v221 0
Citrus_clementina_v165 0
Citrus_sinensis_v154   (Sweet orange)   0
Thellungiella_halophila_v173 0
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   3
Capsella_rubella_v183 0
Arabidopsis_lyrata_   (Lyrate rockcress)   0
Arabidopsis_thaliana_10   (Thale cress)   2
Carica_papaya_   (Papaya)   4
Medicago_truncatula_   (Barrel medic)   3
Phaseolus_vulgaris_v186   (French bean)   6
Glycine_max_v109   (Soybean)   9
Cucumis_sativus_v122   (Cucumber)   4
Fragaria_vesca_   (Wild strawberry)   6
Malus_domestica_v196   (Apple)   7
Prunus_persica_v139   (Peach)   8
Linum_usitatissimum_v200   (Flax)   5
Manihot_esculenta_v147   (Cassava)   6
Populus_trichocarpa_v156   (Black cottonwood)   5
Vitis_vinifera_   (Wine grape)   1
Mimulus_guttatus_v140   (Spotted monkey flower)   2
Solanum_lycopersicum_v.2.3   (Tomato)   3
Solanum_tuberosum_   (Potato)   11
Actinidia_chinensis_Hongyang_ 6
Aquilegia_coerulea_v195 0
Triticum_urartu_22 6
Triticum_aestivum_22   (Bread wheat)   15
Aegilops_tauschii_22 4
Brachypodium_distachyon_   (Stiff brome)   5
Oryza_barthii_22   (African wild rice)   2
Oryza_meridionalis_22 1
Oryza_glumaepatula_22 2
Oryza_glaberrima   (African rice)   3
Oryza_punctata_22 3
Oryza_nivara_22 3
Oryza_brachyantha_22   (Malo sina)   7
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   95
Oryza_sativa_v193   (Rice)   91
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   5
Panicum_virgatum_v202   (Switchgrass)   5
Setaria_italica_v164   (Foxtail millet)   1
Zea_mays_subsp._mays_   (Maize)   3
Zea_mays_v181   (Maize)   3
Sorghum_bicolor_   (Sorghum)   23
Musa_balbisiana   (Balbis banana)   36
Musa_acuminata_22   (Wild Malaysian banana)   1
Amborella_trichopoda_22 4
Physcomitrella_patens 0
Coccomyxa_subellipsoidea_sp._C-169_v2 1
Asterochloris_sp._Cgr/DA1pho_v1.0 1
Chlorella_variabilis_sp._NC64A_ 3
Chlorella_vulgaris_ 1
Volvox_carteri_f._nagariensis_ 2
Volvox_carteri_v199 1
Chlamydomonas_reinhardtii_4.0 1
Ostreococcus_sp._RCC809_ 0
Ostreococcus_lucimarinus_CCE9901_ 0
Ostreococcus_tauri_ 0
Bathycoccus_prasinos_ 1
Micromonas_sp._RCC299_ 1
Micromonas_pusilla_CCMP1545_v3.0 0
Cyanidioschyzon_merolae_strain_10D_22 1
Cyanidioschyzon_merolae 1
Porphyridium_purpureum_02_2012 0
Thecamonas_trahens_ATCC_50062_ 1
Bigelowiella_natans_CCMP2755_22 0
Giardia_lamblia_2.3 3
Cyanophora_paradoxa_ 6
Leishmania_mexicana_2.4 2
Leishmania_major_strain_Friedlin_ 2
Leishmania_infantum_JPCM5_2.4 2
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 2
Trypanosoma_vivax_ 7
Trypanosoma_cruzi_strain_CL_Brener 2
Trypanosoma_congolense_2.4 3
Trypanosoma_brucei_gambiense_v4.1 1
Trypanosoma_brucei_TREU927_v4.1 2
Ectocarpus_siliculosus 2
Aureococcus_anophagefferens_ 0
Albugo_laibachii_22 3
Pythium_iwayamai_DAOM_BR242034_22 0
Pythium_arrhenomanes_ATCC_12531_22 1
Pythium_ultimum_v1.7-2 0
Pythium_aphanidermatum_DAOM_BR444_22 1
Pythium_irregulare_DAOM_BR486_22 0
Pythium_vexans_DAOM_BR484_22 0
Phytophthora_ramorum_1.1   (Sudden oak death agent)   8
Phytophthora_sojae_1.1 20
Phytophthora_infestans_T30-4_ 5
Phytophthora_capsici_ 1
Hyaloperonospora_arabidopsidis_22 2
Phaeodactylum_tricornutumCCAP_1055/1 1
Fragilariopsis_cylindrus 2
Thalassiosira_pseudonana_CCMP1335 1
Perkinsus_marinus_ATCC_50983_ 12
Paramecium_tetraurelia_ 0
Tetrahymena_thermophila_SB210_1_ 0
Ichthyophthirius_multifiliis_strain_G5_ 0
Cryptosporidium_hominis 1
Cryptosporidium_muris 1
Cryptosporidium_parvum_Iowa_II 0
Neospora_caninum 1
Toxoplasma_gondii_VEG 1
Toxoplasma_gondii_ME49 0
Toxoplasma_gondii_GT1 1
Babesia_bovis_T2Bo_ 0
Theileria_parva__ 1
Theileria_annulata 1
Plasmodium_falciparum_3D7_ 0
Plasmodium_vivax_SaI-1_7.0 0
Plasmodium_knowlesi_strain_H_ 0
Plasmodium_yoelii_ssp._yoelii_1_ 2
Plasmodium_chabaudi_ 0
Plasmodium_berghei_ANKA_ 0
Symbiodinium_minutum_clade_B1_v1.2 17
Naegleria_gruberi_ 0
Trichomonas_vaginalis_ 2
Guillardia_theta_CCMP2712_v1.0_ 2
Emiliania_huxleyi_CCMP1516_ 3
Acaryochloris_marina_MBIC11017 6
Microcoleus_sp._PCC_7113 3
Trichodesmium_erythraeum_IMS101 6
Cyanothece_sp._PCC_8802 1
Halothece_sp._PCC_7418 3
Microcystis_aeruginosa_NIES-843 6
Gloeobacter_violaceus_PCC_7421 1
Rivularia_sp._PCC_7116 2
Calothrix_sp._PCC_7507 1
Anabaena_variabilis_ATCC_29413 2
Nostoc_sp._PCC_7107 1
Nostoc_sp._PCC_7120 2
Anabaena_sp._90 1
Onion_yellows_phytoplasma_OY-M 1
Slackia_heliotrinireducens_DSM_20476 0
Ilumatobacter_coccineus 1
Acidimicrobium_ferrooxidans_DSM_10331 1
Nakamurella_multipartita_DSM_44233 1
Acidothermus_cellulolyticus_11B 1
Catenulispora_acidiphila_DSM_44928 1
Stackebrandtia_nassauensis_DSM_44728 1
Frankia_symbiont_of_Datisca_glomerata 2
Frankia_sp._EAN1pec 3
Frankia_alni_ACN14a 1
Kitasatospora_setae_KM-6054 1
Streptomyces_bingchenggensis_BCW-1 1
Streptomyces_avermitilis_MA-4680 1
Pseudonocardia_dioxanivorans_CB1190 1
Saccharopolyspora_erythraea_NRRL_2338 1
Amycolatopsis_mediterranei_U32 2
Kribbella_flavida_DSM_17836 1
Nocardioides_sp._JS614 1
Propionibacterium_acnes_SK137 1
Microlunatus_phosphovorus_NM-1 3
Salinispora_arenicola_CNS-205 1
Salinispora_tropica_CNB-440 1
Verrucosispora_maris_AB-18-032 1
Micromonospora_sp._L5 1
Micromonospora_aurantiaca_ATCC_27029 1
Actinoplanes_sp._N902-109 1
Actinoplanes_sp._SE50/110 1
Actinoplanes_missouriensis_431 1
Tsukamurella_paurometabola_DSM_20162 1
Gordonia_sp._KTR9 1
Gordonia_polyisoprenivorans_VH2 1
Gordonia_bronchialis_DSM_43247 1
Rhodococcus_jostii_RHA1 1
Rhodococcus_equi_103S 1
Rhodococcus_opacus_B4 4
Rhodococcus_erythropolis_PR4 0
Nocardia_cyriacigeorgica_GUH-2 1
Nocardia_farcinica_IFM_10152 1
Amycolicicoccus_subflavus_DQS3-9A1 1
Mycobacterium_abscessus_ATCC_19977 1
Mycobacterium_sp._JLS 1
Mycobacterium_intracellulare_ATCC_13950 1
Mycobacterium_avium_104 1
Mycobacterium_vanbaalenii_PYR-1 1
Mycobacterium_canettii_CIPT_140010059 1
Mycobacterium_africanum_GM041182 1
Mycobacterium_tuberculosis_KZN_1435 1
Mycobacterium_tuberculosis 1
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 1
Mycobacterium_rhodesiae_NBB3 1
Mycobacterium_ulcerans_Agy99 1
Mycobacterium_gilvum_PYR-GCK 1
Mycobacterium_chubuense_NBB4 1
Mycobacterium_marinum_M 1
Mycobacterium_smegmatis_str._MC2_155 1
Corynebacterium_resistens_DSM_45100 1
Corynebacterium_aurimucosum_ATCC_700975 1
Corynebacterium_kroppenstedtii_DSM_44385 1
Corynebacterium_efficiens_YS-314 1
Corynebacterium_urealyticum_DSM_7109 1
Corynebacterium_jeikeium_K411 1
Corynebacterium_variabile_DSM_44702 1
Corynebacterium_glutamicum_R 1
Corynebacterium_diphtheriae_NCTC_13129 1
Sanguibacter_keddieii_DSM_10542 1
Beutenbergia_cavernae_DSM_12333 1
Microbacterium_testaceum_StLB037 1
Jonesia_denitrificans_DSM_20603 1
Brachybacterium_faecium_DSM_4810 1
Isoptericola_variabilis_225 1
Xylanimonas_cellulosilytica_DSM_15894 1
Cellulomonas_flavigena_DSM_20109 1
Cellulomonas_fimi_ATCC_484 1
[Cellvibrio]_gilvus_ATCC_13127 1
Actinomyces_sp._F0330 1
Herpetosiphon_aurantiacus_DSM_785 3
Eubacterium_siraeum 1
Clostridium_cellulolyticum_H10 1
Sulfobacillus_acidophilus_DSM_10332 1
Oscillibacter_valericigenes_Sjm18-20 2
butyrate-producing_bacterium_SS3/4 1
Candidatus_Desulforudis_audaxviator_MP104C 1
Dehalobacter_sp._DCA 2
Dehalobacter_sp._CF 2
Syntrophobotulus_glycolicus_DSM_8271 1
Desulfitobacterium_hafniense_Y51 4
Acetobacterium_woodii_DSM_1030 1
Clostridium_difficile_630 1
Clostridium_kluyveri_DSM_555 1
Clostridium_cellulovorans_743B 2
Thermoanaerobacter_italicus_Ab9 1
Halanaerobium_praevalens_DSM_2228 1
Carnobacterium_sp._WN1359 1
Enterococcus_faecium_Aus0004 3
Leuconostoc_gasicomitatum_LMG_18811 1
Lactococcus_lactis_subsp._cremoris_MG1363 1
Streptococcus_mutans_NN2025 1
Paenibacillus_polymyxa_M1 1
Lysinibacillus_sphaericus_C3-41 2
Geobacillus_thermoleovorans_CCB_US3_UF5 1
Geobacillus_kaustophilus_HTA426 1
Geobacillus_sp._WCH70 1
Halobacillus_halophilus_DSM_2266 5
Bacillus_sp._1NLA3E 3
Bacillus_thuringiensis_str._Al_Hakam 1
Bacillus_cereus_03BB102 1
Bacillus_anthracis_str._A0248 2
Bacillus_pseudofirmus_OF4 3
Gemmatimonas_aurantiaca_T-27 1
Pelodictyon_phaeoclathratiforme_BU-1 1
Chlorobium_phaeobacteroides_DSM_266 1
Chlorobium_limicola_DSM_245 1
Haliscomenobacter_hydrossis_DSM_1100 2
Runella_slithyformis_DSM_19594 1
Odoribacter_splanchnicus_DSM_20712 2
Alistipes_finegoldii_DSM_17242 6
Bacteroides_thetaiotaomicron_VPI-5482 1
Fluviicola_taffensis_DSM_16823 1
Phycisphaera_mikurensis_NBRC_102666 1
Rhodopirellula_baltica_SH_1 1
Pirellula_staleyi_DSM_6068 0
Deferribacter_desulfuricans_SSM1 0
Streptobacillus_moniliformis_DSM_12112 1
Bdellovibrio_bacteriovorus_HD100 1
Desulfarculus_baarsii_DSM_2075 1
Desulfobacca_acetoxidans_DSM_11109 1
Desulfovibrio_magneticus_RS-1 1
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 1
Pelobacter_propionicus_DSM_2379 0
Haliangium_ochraceum_DSM_14365 2
Sorangium_cellulosum_'So_ce_56' 1
Anaeromyxobacter_sp._Fw109-5 1
Anaeromyxobacter_dehalogenans_2CP-1 1
Corallococcus_coralloides_DSM_2259 1
Myxococcus_fulvus_HW-1 1
Thauera_sp._MZ1T 1
Dechlorosoma_suillum_PS 1
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 2
Thiomonas_arsenitoxydans 1
Thiomonas_intermedia_K12 1
Rubrivivax_gelatinosus_IL144 1
Leptothrix_cholodnii_SP-6 1
Burkholderia_phytofirmans_PsJN 1
Burkholderia_xenovorans_LB400 1
Ralstonia_eutropha_JMP134 1
Cupriavidus_taiwanensis_LMG_19424 1
Cupriavidus_metallidurans_CH34 1
Cupriavidus_necator_N-1 1
Ralstonia_eutropha_H16 1
Ralstonia_pickettii_12D 1
Ralstonia_solanacearum_CFBP2957 1
Burkholderia_sp._RPE64 1
Burkholderia_vietnamiensis_G4 1
Delftia_sp._Cs1-4 1
Delftia_acidovorans_SPH-1 2
Polaromonas_sp._JS666 4
Polaromonas_naphthalenivorans_CJ2 2
Variovorax_paradoxus_S110 1
Acidovorax_ebreus_TPSY 1
Acidovorax_sp._KKS102 1
Acidovorax_sp._JS42 1
Bordetella_petrii_DSM_12804 4
Nitrosospira_multiformis_ATCC_25196 1
Brevundimonas_subvibrioides_ATCC_15264 1
Caulobacter_sp._K31 1
Caulobacter_crescentus_NA1000 1
Caulobacter_segnis_ATCC_21756 1
Phenylobacterium_zucineum_HLK1 1
Erythrobacter_litoralis_HTCC2594 1
Sphingopyxis_alaskensis_RB2256 1
Novosphingobium_sp._PP1Y 1
Novosphingobium_aromaticivorans_DSM_12444 4
Sphingobium_sp._SYK-6 1
Sphingobium_japonicum_UT26S 1
Sphingobium_chlorophenolicum_L-1 1
Sphingomonas_sp._MM-1 2
Sphingomonas_wittichii_RW1 2
Maricaulis_maris_MCS10 1
Hirschia_baltica_ATCC_49814 1
Hyphomonas_neptunium_ATCC_15444 1
Dinoroseobacter_shibae_DFL_12 1
Pseudovibrio_sp._FO-BEG1 1
Roseobacter_litoralis_Och_149 1
Roseobacter_denitrificans_OCh_114 1
Rhodobacter_sphaeroides_ATCC_17029 1
Rhodobacter_capsulatus_SB_1003 1
Tistrella_mobilis_KA081020-065 2
Azospirillum_lipoferum_4B 1
Azospirillum_sp._B510 1
Micavibrio_aeruginosavorus_ARL-13 1
Candidatus_Puniceispirillum_marinum_IMCC1322 0
Starkeya_novella_DSM_506 1
Xanthobacter_autotrophicus_Py2 1
Azorhizobium_caulinodans_ORS_571 1
Methylobacterium_radiotolerans_JCM_2831 1
Parvibaculum_lavamentivorans_DS-1 1
Ochrobactrum_anthropi_ATCC_49188 1
Brucella_microti_CCM_4915 1
Brucella_pinnipedialis_B2/94 1
Brucella_canis_ATCC_23365 1
Brucella_suis_ATCC_23445 1
Brucella_melitensis_ATCC_23457 1
Brucella_abortus_S19 1
Sinorhizobium_fredii_NGR234 1
Sinorhizobium_medicae_WSM419 1
Sinorhizobium_meliloti_AK83 1
Rhizobium_etli_CIAT_652 1
Rhizobium_leguminosarum_bv._viciae_3841 1
Agrobacterium_tumefaciens_str._C58 0
Agrobacterium_radiobacter_K84 1
Mesorhizobium_sp._BNC1 1
Mesorhizobium_opportunistum_WSM2075 1
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 1
Mesorhizobium_loti_MAFF303099 1
Methylocella_silvestris_BL2 1
Beijerinckia_indica_subsp._indica_ATCC_9039 1
Pelagibacterium_halotolerans_B2 2
Rhodomicrobium_vannielii_ATCC_17100 1
Hyphomicrobium_sp._MC1 1
Hyphomicrobium_denitrificans_ATCC_51888 1
Oligotropha_carboxidovorans_OM4 1
Rhodopseudomonas_palustris_BisA53 1
Nitrobacter_winogradskyi_Nb-255 1
Nitrobacter_hamburgensis_X14 1
Bradyrhizobium_japonicum_USDA_110 1
Bradyrhizobium_sp._ORS_278 1
Methylocystis_sp._SC2 1
Saccharophagus_degradans_2-40 1
Teredinibacter_turnerae_T7901 1
Vibrio_vulnificus_MO6-24/O 0
Shewanella_piezotolerans_WP3 1
Shewanella_loihica_PV-4 1
Shewanella_amazonensis_SB2B 1
Marinomonas_sp._MWYL1 1
Marinomonas_mediterranea_MMB-1 1
Xanthomonas_campestris_pv._campestris_str._B100 1
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 1
Serratia_sp._ATCC_39006 1
Dickeya_dadantii_Ech703 1
Dickeya_zeae_Ech1591 1
Escherichia_blattae_DSM_4481 1
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 0
Citrobacter_rodentium_ICC168 1
Pseudomonas_stutzeri_A1501 1
Methanocella_arvoryzae_MRE50 0
Methanosarcina_acetivorans_C2A 1

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   5
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   0
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   0
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   2
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   0
Cryptococcus_neoformans_var._grubii_H99_ 1
Cryptococcus_neoformans_B-3501A_ 1
Cryptococcus_neoformans_JEC21_ 5
Paracoccidioides_brasiliensis_Pb01_ 1
Paracoccidioides_brasiliensis_Pb03_ 1
Coccidioides_posadasii_str._Silveira_ 1
Coccidioides_immitis_RMSCC_3703_ 1
Coccidioides_immitis_RMSCC_2394_ 1
Coccidioides_immitis_H538.4_ 1
Ajellomyces_dermatitidis_ER-3_ 1
Histoplasma_capsulatum_H143 1
Histoplasma_capsulatum_H88 1
Histoplasma_capsulatum_G186AR 0
Aspergillus_fumigatus_A1163_ 1
Candida_albicans_WO-1_ 1
Saccharomyces_cerevisiae_UC5 0
Saccharomyces_cerevisiae_PW5 0
Saccharomyces_cerevisiae_FL100 1
Saccharomyces_cerevisiae_CLIB324 0
Saccharomyces_cerevisiae_CBS7960 1
Saccharomyces_cerevisiae_YJM269 0
Saccharomyces_cerevisiae_T7 0
Saccharomyces_cerevisiae_FostersB 0
Saccharomyces_cerevisiae_VL3 0
Saccharomyces_cerevisiae_Vin13 1
Saccharomyces_cerevisiae_LalvinQA23 0
Saccharomyces_cerevisiae_AWRI796 0
Saccharomyces_cerevisiae_Sigma1278b 0
Saccharomyces_cerevisiae_W303 0
Saccharomyces_cerevisiae_JAY291 0
Saccharomyces_cerevisiae_AWRI1631 0
Saccharomyces_cerevisiae_YPS163 0
Saccharomyces_cerevisiae_CLIB215 0
Saccharomyces_cerevisiae_Y10 1
Saccharomyces_cerevisiae_YJM789_ 0
Saccharomyces_cerevisiae_YJM789 0
Saccharomyces_cerevisiae_RM11-1a 0
Saccharomyces_cerevisiae_RM11-1a_ 0
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   0
Schizosaccharomyces_pombe_972h-_ 0
Batrachochytrium_dendrobatidis_JEL423_ 0
Batrachochytrium_dendrobatidis_JAM81_ 0
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   70
Hordeum_vulgare_22   (Domesticated barley)   16
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   63
Trypanosoma_brucei_Lister_427_v4.1 2
Neospora_caninum_Nc-Liverpool_6.2 1
Plasmodium_falciparum_HB3_ 0
Plasmodium_falciparum_Dd2_ 0
Chamaesiphon_minutus_PCC_6605 2
Dactylococcopsis_salina_PCC_8305 20
Crinalium_epipsammum_PCC_9333 6
Oscillatoria_nigro-viridis_PCC_7112 12
Oscillatoria_acuminata_PCC_6304 15
Arthrospira_platensis_NIES-39 87
Cyanothece_sp._PCC_7822 6
Cyanothece_sp._PCC_7424 3
Cyanothece_sp._ATCC_51142 7
Cyanothece_sp._PCC_8801 4
Stanieria_cyanosphaera_PCC_7437 2
Calothrix_parietina_Calothrix_sp._PCC_6303 1
Anabaena_cylindrica_PCC_7122 1
Candidatus_Phytoplasma_australiense_Strawberry_lethal_yellows_phytoplasma_(CPA)_str._NZSb11 5
Frankia_sp._EuI1c 1
Streptomyces_davawensis_JCM_4913 1
Saccharothrix_espanaensis_DSM_44229 1
Amycolatopsis_mediterranei_RB 2
Amycolatopsis_mediterranei_S699 2
Amycolatopsis_mediterranei_S699 2
Amycolatopsis_orientalis_HCCB10007 1
Propionibacterium_avidum_44067 1
Propionibacterium_acnes_ATCC_11828 1
Propionibacterium_acnes_TypeIA2_P.acn31 1
Propionibacterium_acnes_TypeIA2_P.acn17 1
Propionibacterium_acnes_TypeIA2_P.acn33 1
Propionibacterium_acnes_C1 1
Propionibacterium_acnes_HL096PA1 1
Propionibacterium_acnes_6609 1
Propionibacterium_acnes_266 1
Propionibacterium_acnes_KPA171202 1
Propionibacterium_acidipropionici_ATCC_4875 1
Actinoplanes_friuliensis_DSM_7358 1
Rhodococcus_pyridinivorans_SB3094 1
Rhodococcus_erythropolis_CCM2595 1
Nocardia_brasiliensis_ATCC_700358 1
Mycobacterium_sp._MOTT36Y 1
Mycobacterium_sp._JDM601 1
Mycobacterium_abscessus_subsp._bolletii_50594 1
Mycobacterium_liflandii_128FXT 1
Mycobacterium_sp._KMS 1
Mycobacterium_sp._MCS 1
Mycobacterium_yongonense_05-1390 1
Mycobacterium_intracellulare_MOTT-64 1
Mycobacterium_indicus_pranii_MTCC_9506 1
Mycobacterium_intracellulare_MOTT-02 1
Mycobacterium_avium_subsp._paratuberculosis_MAP4 1
Mycobacterium_avium_subsp._paratuberculosis_K-10 1
Mycobacterium_canettii_CIPT_140070017 1
Mycobacterium_canettii_CIPT_140060008 1
Mycobacterium_canettii_CIPT_140070008 1
Mycobacterium_canettii_CIPT_140070010 1
Mycobacterium_tuberculosis_EAI5/NITR206 1
Mycobacterium_tuberculosis_EAI5 1
Mycobacterium_tuberculosis_str._Beijing/NITR203 1
Mycobacterium_tuberculosis_UT205 1
Mycobacterium_tuberculosis_RGTB327 1
Mycobacterium_tuberculosis_CTRI-2 1
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 1
Mycobacterium_tuberculosis_KZN_605 1
Mycobacterium_tuberculosis_KZN_4207 1
Mycobacterium_tuberculosis_CCDC5180 1
Mycobacterium_tuberculosis_CCDC5079 1
Mycobacterium_tuberculosis_CCDC5079 1
Mycobacterium_tuberculosis_H37Ra 1
Mycobacterium_tuberculosis_str._Haarlem/NITR202 1
Mycobacterium_tuberculosis_str._Haarlem 1
Mycobacterium_tuberculosis_F11 1
Mycobacterium_tuberculosis_H37Rv 1
Mycobacterium_tuberculosis_CDC1551 1
Mycobacterium_bovis_AF2122/97 1
Mycobacterium_bovis_BCG_str._Korea_1168P 1
Mycobacterium_bovis_BCG_str._Mexico 1
Mycobacterium_bovis_BCG_str._Tokyo_172 1
Mycobacterium_gilvum_Spyr1 1
Mycobacterium_smegmatis_str._MC2_155 1
Mycobacterium_kansasii_ATCC_12478 1
Corynebacterium_terpenotabidum_Y-11 1
Corynebacterium_urealyticum_DSM_7111 1
Corynebacterium_argentoratense_DSM_44202 1
Corynebacterium_callunae_DSM_20147 1
Corynebacterium_glutamicum_MB001 1
Corynebacterium_glutamicum_SCgG2 1
Corynebacterium_glutamicum_SCgG1 1
Corynebacterium_glutamicum_ATCC_13032 1
Corynebacterium_glutamicum_ATCC_13032 1
Corynebacterium_glutamicum_ATCC_13032 1
Corynebacterium_diphtheriae_BH8 1
Corynebacterium_diphtheriae_INCA_402 1
Corynebacterium_diphtheriae_VA01 1
Corynebacterium_diphtheriae_HC04 1
Corynebacterium_diphtheriae_HC03 1
Corynebacterium_diphtheriae_HC02 1
Corynebacterium_diphtheriae_HC01 1
Corynebacterium_diphtheriae_241 1
Corynebacterium_diphtheriae_CDCE_8392 1
Corynebacterium_diphtheriae_PW8 1
Corynebacterium_diphtheriae_C7_(beta) 1
Corynebacterium_diphtheriae_31A 1
Actinomyces_odontolyticus_ATCC_17982 1
Actinomyces_viscosus_C505 1
[Eubacterium]_cylindroides_[Eubacterium]_cylindroides_T2-87 1
Sulfobacillus_acidophilus_TPY 1
Desulfitobacterium_hafniense_DCB-2 1
Desulfotomaculum_gibsoniae_DSM_7213 1
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 1
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 2
Clostridium_kluyveri_NBRC_12016 1
Clostridium_pasteurianum_BC1 2
Clostridium_botulinum_BKT015925 1
Clostridium_botulinum_Ba4_str._657 2
Clostridium_botulinum_A3_str._Loch_Maree 1
Halobacteroides_halobius_DSM_5150 2
Enterococcus_mundtii_QU_25 4
Enterococcus_faecium_Aus0085 4
Enterococcus_faecium_DO 2
Enterococcus_faecalis_V583 1
Lactobacillus_reuteri_TD1 1
Lactobacillus_helveticus_H10 1
Lactococcus_lactis_subsp._lactis_KLDS_4.0325 1
Lactococcus_lactis_subsp._cremoris_A76 1
Lactococcus_lactis_subsp._cremoris_NZ9000 1
Lactococcus_lactis_subsp._cremoris_SK11 2
Streptococcus_constellatus_subsp._pharyngis_C1050 1
Streptococcus_constellatus_subsp._pharyngis_C818 1
Streptococcus_constellatus_subsp._pharyngis_C232 1
Streptococcus_anginosus_C238 3
Streptococcus_equi_subsp._zooepidemicus_ATCC_35246 3
Streptococcus_equi_subsp._zooepidemicus 1
Streptococcus_pyogenes_MGAS10750 1
Streptococcus_pneumoniae_ATCC_700669 1
Streptococcus_agalactiae_ILRI112 1
Streptococcus_suis_T15 1
Paenibacillus_polymyxa_SC2 1
Listeria_monocytogenes_J1816 1
Listeria_monocytogenes_SLCC7179 1
Listeria_monocytogenes_Finland_1998 1
Geobacillus_sp._Y412MC52 1
Geobacillus_sp._Y412MC61 1
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 1
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 1
Bacillus_amyloliquefaciens_LL3 1
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 1
Bacillus_thuringiensis_HD-789 0
Bacillus_thuringiensis_MC28 6
Bacillus_thuringiensis_serovar_chinensis_CT-43 15
Bacillus_thuringiensis_YBT-1518 5
Bacillus_thuringiensis_Bt407 4
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 5
Bacillus_thuringiensis_BMB171 3
Bacillus_thuringiensis_serovar_finitimus_YBT-020 2
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 17
Bacillus_cereus_FRI-35 2
Bacillus_cereus_biovar_anthracis_str._CI 2
Bacillus_cereus_AH820 3
Bacillus_cereus_AH187 9
Bacillus_cereus_G9842 3
Bacillus_cereus_Q1 7
Bacillus_cereus_F837/76 1
Bacillus_cereus_NC7401 9
Bacillus_cereus_E33L 1
Bacillus_cereus_ATCC_10987 5
Bacillus_anthracis_str._H9401 2
Bacillus_anthracis_str._CDC_684 2
Bacillus_anthracis_str._'Ames_Ancestor' 2
Bacillus_anthracis_str._A2012 2
Bacillus_megaterium_QM_B1551 1
Staphylococcus_aureus_subsp._aureus_MSHR1132 1
Staphylococcus_epidermidis_ATCC_12228 0
Staphylococcus_aureus_M1 1
Porphyromonas_gingivalis_TDC60 0
Porphyromonas_gingivalis_W83 0
Alistipes_shahii_WAL_8301 3
Bacteroides_xylanisolvens_XB1A 1
Bacteroides_fragilis_638R 2
Singulisphaera_acidiphila_DSM_18658 1
Bdellovibrio_exovorus_JSS 1
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 2
Sorangium_cellulosum_So0157-2 1
Anaeromyxobacter_sp._K 1
Anaeromyxobacter_dehalogenans_2CP-C 1
Burkholderia_phenoliruptrix_BR3459a 1
Pandoraea_pnomenusa_3kgm 1
Ralstonia_pickettii_12J 1
Ralstonia_solanacearum_FQY_4 1
Ralstonia_solanacearum_Po82 1
Ralstonia_solanacearum_PSI07 1
Ralstonia_solanacearum_CMR15 1
Ralstonia_solanacearum_GMI1000 1
Burkholderia_sp._YI23 1
Burkholderia_sp._CCGE1001 1
Burkholderia_thailandensis_MSMB121 1
Burkholderia_pseudomallei_1710b 1
Burkholderia_pseudomallei_K96243 0
Burkholderia_cepacia_GG4 1
Variovorax_paradoxus_B4 1
Variovorax_paradoxus_EPS 1
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 1
Caulobacter_crescentus_CB15 1
Leisingera_methylohalidivorans_DSM_14336 1
Octadecabacter_antarcticus_307 1
Rhodobacter_sphaeroides_KD131 1
Rhodobacter_sphaeroides_ATCC_17025 1
Rhodobacter_sphaeroides_2.4.1 1
Gluconobacter_oxydans_H24 1
Wolbachia_endosymbiont_of_Drosophila_simulans_wNo 1
Methylobacterium_extorquens_DM4 1
Brucella_ceti_TE10759-12 1
Brucella_ceti_TE28753-12 1
Brucella_canis_HSK_A52141 1
Brucella_suis_VBI22 1
Brucella_suis_1330 1
Brucella_suis_1330 1
Brucella_melitensis_NI 1
Brucella_melitensis_M5-90 1
Brucella_melitensis_M28 1
Brucella_melitensis_bv._1_str._16M 1
Brucella_abortus_A13334 1
Brucella_melitensis_biovar_Abortus_2308 1
Brucella_abortus_bv._1_str._9-941 1
Sinorhizobium_fredii_USDA_257 1
Sinorhizobium_fredii_HH103 1
Sinorhizobium_meliloti_2011 1
Sinorhizobium_meliloti_GR4 2
Sinorhizobium_meliloti_Rm41 1
Sinorhizobium_meliloti_SM11 1
Sinorhizobium_meliloti_BL225C 1
Sinorhizobium_meliloti_1021 1
Rhizobium_etli_CFN_42 1
Rhizobium_etli_bv._mimosae_str._Mim1 1
Rhizobium_tropici_CIAT_899 1
Rhizobium_leguminosarum_bv._trifolii_WSM2304 1
Mesorhizobium_australicum_WSM2073 1
Hyphomicrobium_nitrativorans_NL23 1
Hyphomicrobium_denitrificans_1NES1 1
Oligotropha_carboxidovorans_OM5 1
Oligotropha_carboxidovorans_OM5 1
Rhodopseudomonas_palustris_DX-1 1
Rhodopseudomonas_palustris_TIE-1 1
Rhodopseudomonas_palustris_HaA2 1
Rhodopseudomonas_palustris_BisB5 1
Rhodopseudomonas_palustris_BisB18 1
Rhodopseudomonas_palustris_CGA009 1
Bradyrhizobium_sp._S23321 1
Bradyrhizobium_sp._BTAi1 1
Bradyrhizobium_oligotrophicum_S58 1
Bradyrhizobium_japonicum_USDA_6 1
Vibrio_vulnificus_YJ016 1
Vibrio_cholerae_IEC224 1
Shewanella_sp._W3-18-1 1
Xanthomonas_campestris_pv._campestris_str._8004 1
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 1
Pantoea_ananatis_PA13 1
Klebsiella_pneumoniae_CG43 1
Klebsiella_pneumoniae_KCTC_2242 1
Escherichia_coli_JJ1886 1
Escherichia_coli_Xuzhou21 1
Escherichia_coli_BL21(DE3) 0
Escherichia_coli_BL21(DE3) 0
Escherichia_coli_SE15 1
Escherichia_coli_O157:H7_str._Sakai 1
Escherichia_coli_O157:H7_str._EDL933 1
Pseudomonas_syringae_pv._phaseolicola_1448A 1
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 1
Pseudomonas_putida_S16 1
Pseudomonas_putida_KT2440 0
Pseudomonas_aeruginosa_DK2 2
Archaeoglobus_sulfaticallidus_PM70-1 0

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Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   0
Pan_troglodytes_69_2.1.4   (Chimpanzee)   0
Gorilla_gorilla_69_3.1   (Western gorilla)   0
Pongo_abelii_69_2   (Sumatran orangutan)   1
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   0
Macaca_mulatta_69_1   (Rhesus monkey)   1
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   0
Otolemur_garnettii_69_3   (Small-eared galago)   0
Microcebus_murinus_69_1   (Gray mouse lemur)   2
Rattus_norvegicus_69_3.4   (Norway rat)   1
Mus_musculus_69_38   (House mouse)   0
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   0
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   0
Cavia_porcellus_69_3   (Domestic guinea pig)   1
Oryctolagus_cuniculus_69_2   (Rabbit)   0
Ochotona_princeps_69   (American pika)   1
Tupaia_belangeri_69   (Northern tree shrew)   0
Sus_scrofa_69_10.2   (Pig)   0
Bos_taurus_69_3.1   (Cattle)   0
Vicugna_pacos_69_1   (Alpaca)   0
Tursiops_truncatus_69_1   (Bottlenose dolphin)   1
Mustela_putorius_furo_69_1.0   (Domestic ferret)   0
Ailuropoda_melanoleuca_69_1   (Giant panda)   0
Canis_familiaris_69_3.1   (Dog)   0
Felis_catus_69   (Domestic cat)   0
Equus_caballus_69_2   (Horse)   56
Myotis_lucifugus_69_2.0   (Little brown bat)   0
Pteropus_vampyrus_69_1   (Large flying fox)   0
Sorex_araneus_69_1   (European shrew)   0
Erinaceus_europaeus_69   (Western European hedgehog)   0
Procavia_capensis_69_1   (Cape rock hyrax)   0
Loxodonta_africana_69_3   (African savanna elephant)   1
Echinops_telfairi_69   (Small Madagascar hedgehog)   1
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   1
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   0
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   0
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   18
Ornithorhynchus_anatinus_69_5   (Platypus)   1
Petromyzon_marinus_69_7.0   (Sea lamprey)   0
Meleagris_gallopavo_69_2   (Turkey)   1
Gallus_gallus_69_2   (Chicken)   0
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   0
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   6
Anolis_carolinensis_69_2.0   (Green anole)   3
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   1
Latimeria_chalumnae_69_1   (Coelacanth)   12
Gadus_morhua_69_1   (Atlantic cod)   0
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   1
Takifugu_rubripes_69_4   (Torafugu)   1
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   2
Oryzias_latipes_69_1   (Japanese medaka)   1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   1
Oreochromis_niloticus_69_1.0   (Nile tilapia)   3
Danio_rerio_69_9   (Zebrafish)   2
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   0
Ciona_intestinalis_69   (Vase tunicate)   1
Drosophila_melanogaster_69_5   (Fruit fly)   0
Caenorhabditis_elegans_69_215   (Roundworm)   0
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   0
Arabidopsis_thaliana_10   (Thale cress)   2

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Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   4
Homo_sapiens__(NCBI_version)   (Human)   0
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   0
Loa_loa_v3.3_(Request)   (Eye worm)   1
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   1
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   2
Moniliophthora_perniciosa_FA553__(Genome_survey) 5
Encephalitozoon_intestinalis__(endoparasite) 0
Encephalitozoon_cuniculi_(endoparasite) 0
Lotus_japonicus__(Early_assembly) 6
Malus_x_domestica_(Duplicate)   (Apple)   7
Ricinus_communis__(Early_assembly)   (Castor bean)   6
Nicotiana_benthamiana_0.4.4_(Early_draft) 8
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   3
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   3
Phoenix_dactylifera__(Early_draft)   (Date palm)   5
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 1
NCBI_plasmid_sequences_(Plasmids) 177
Protein_Data_Bank_(all_PDB_sequenc) 4
PDB_chains_(SCOP_1.75)_(PDB) 0
TargetDB__(Targets) 42
NCBI_viral_sequences_(Viral) 51
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 12
STRING_v9.0.5_(STRING) 728
UniProt__viral_sequences_(Viral) 1019
NCBI_2017_08_genome 27333
Uniprot_2018_03_genome 43725
Protozoadb_2010_08_(Protozoadb) 23

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