SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 57903,48403 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57903 - FYVE/PHD zinc finger
48403 - Ankyrin repeat

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Hydra_vulgaris 0
Monosiga_brevicollis_ 0
Selaginella_moellendorffii_ 2
Eucalyptus_grandis_v201   (Rose gum)   1
Theobroma_cacao_B97-61/B2_v1   (Cacao)   1
Gossypium_raimondii_v221 2
Citrus_clementina_v165 1
Citrus_sinensis_v154   (Sweet orange)   2
Medicago_truncatula_   (Barrel medic)   4
Phaseolus_vulgaris_v186   (French bean)   1
Glycine_max_v109   (Soybean)   2
Cucumis_sativus_v122   (Cucumber)   1
Malus_domestica_v196   (Apple)   2
Prunus_persica_v139   (Peach)   1
Manihot_esculenta_v147   (Cassava)   4
Populus_trichocarpa_v156   (Black cottonwood)   3
Vitis_vinifera_   (Wine grape)   1
Mimulus_guttatus_v140   (Spotted monkey flower)   1
Actinidia_chinensis_Hongyang_ 0
Aquilegia_coerulea_v195 4
Triticum_urartu_22 1
Aegilops_tauschii_22 1
Brachypodium_distachyon_   (Stiff brome)   1
Oryza_meridionalis_22 2
Oryza_glumaepatula_22 2
Oryza_glaberrima   (African rice)   1
Oryza_punctata_22 2
Oryza_nivara_22 1
Oryza_brachyantha_22   (Malo sina)   1
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   2
Oryza_sativa_v193   (Rice)   2
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   1
Panicum_virgatum_v202   (Switchgrass)   0
Setaria_italica_v164   (Foxtail millet)   0
Zea_mays_subsp._mays_   (Maize)   1
Zea_mays_v181   (Maize)   1
Sorghum_bicolor_   (Sorghum)   1
Musa_acuminata_22   (Wild Malaysian banana)   1
Amborella_trichopoda_22 1
Physcomitrella_patens 1
Ectocarpus_siliculosus 0
Pythium_arrhenomanes_ATCC_12531_22 0
Pythium_aphanidermatum_DAOM_BR444_22 0
Pythium_irregulare_DAOM_BR486_22 0
Phytophthora_infestans_T30-4_ 0
Hyaloperonospora_arabidopsidis_22 0
Symbiodinium_minutum_clade_B1_v1.2 0

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Strains
Genome     Number
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   1
Hordeum_vulgare_22   (Domesticated barley)   2
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   1

Others
Genome     Number
Malus_x_domestica_(Duplicate)   (Apple)   2
Ricinus_communis__(Early_assembly)   (Castor bean)   1
STRING_v9.0.5_(STRING) 8
NCBI_2017_08_genome 99
Uniprot_2018_03_genome 306

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