SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 64484,64484,51294,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

64484 - beta and beta-prime subunits of DNA dependent RNA-polymerase
64484 - beta and beta-prime subunits of DNA dependent RNA-polymerase
51294 - Hedgehog/intein (Hint) domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Capsaspora_owczarzaki_ATCC_30864_ 1
Rhizomucor_miehei_CAU432_ 1
Haloquadratum_walsbyi_DSM_16790 1

Strains
Genome     Number
Haloquadratum_walsbyi_C23 1

Others
Genome     Number
STRING_v9.0.5_(STRING) 1
UniProt__viral_sequences_(Viral) 1
NCBI_viral_sequences_(Viral) 2
NCBI_2017_08_genome 8
Uniprot_2018_03_genome 243

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