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Domain combinations for 69304,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

69304 - Tricorn protease N-terminal domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Saccoglossus_kowalevskii_v3.0 0
Adineta_vaga 0
Lottia_gigantea_   (Owl limpet)   0
Danaus_plexippus_OGS1.0   (Monarch butterfly)   1
Heliconius_melpomene_   (Postman butterfly)   0
Bombyx_mori_   (Domestic silkworm)   1
Drosophila_persimilis_1.3 0
Anopheles_darlingi_22   (American malaria mosquito)   0
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   0
Rhodnius_prolixus_22 1
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   0
Caenorhabditis_remanei_ 0
Mnemiopsis_leidyi   (Sea walnut)   0
Trichoplax_adhaerens_ 0
Galerina_marginata_v1.0 0
Stereum_hirsutum_FP-91666_SS1__v1.0 0
Tulasnella_calospora_AL13/4D_v1.0 0
Fomitopsis_pinicolav1.0 1
Fomitopsis_pinicola_FP-58527_SS1_v3.0 1
Neurospora_tetrasperma_ 0
Cryphonectria_parasitica_   (Chestnut blight fungus)   0
Didymella_exigua_CBS_183.55_v1.0 0
Leptosphaeria_maculans_22 0
Mycosphaerella_graminicola_IPO323_ 0
Dothistroma_septosporum 0
Coccidioides_immitis_RS_ 0
Penicillium_chrysogenum_Wisconsin_54-1255_ 0
Aspergillus_sydowii_v1.0 0
Aspergillus_glaucus 0
Candida_dubliniensis_CD36_ 0
Pichia_stipitis_CBS_6054_ 0
Candida_guilliermondii_ATCC_6260_ 0
Debaromyces_hansenii 1
Kluyveromyces_thermotolerans_CBS_6340 0
Kluyveromyces_lactis 0
Dictyostelium_discoideum 0
Dictyostelium_purpureum_ 1
Pinus_taeda   (Loblolly pine)   0
Eucalyptus_grandis_v201   (Rose gum)   0
Thellungiella_halophila_v173 0
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   0
Arabidopsis_lyrata_   (Lyrate rockcress)   0
Arabidopsis_thaliana_10   (Thale cress)   0
Medicago_truncatula_   (Barrel medic)   0
Cucumis_sativus_v122   (Cucumber)   0
Manihot_esculenta_v147   (Cassava)   0
Populus_trichocarpa_v156   (Black cottonwood)   0
Vitis_vinifera_   (Wine grape)   0
Mimulus_guttatus_v140   (Spotted monkey flower)   0
Solanum_lycopersicum_v.2.3   (Tomato)   0
Solanum_tuberosum_   (Potato)   0
Actinidia_chinensis_Hongyang_ 0
Triticum_aestivum_22   (Bread wheat)   0
Brachypodium_distachyon_   (Stiff brome)   0
Oryza_barthii_22   (African wild rice)   0
Oryza_glumaepatula_22 1
Oryza_glaberrima   (African rice)   0
Oryza_punctata_22 0
Oryza_nivara_22 1
Oryza_brachyantha_22   (Malo sina)   1
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   1
Oryza_sativa_v193   (Rice)   1
Panicum_virgatum_v202   (Switchgrass)   1
Setaria_italica_v164   (Foxtail millet)   0
Zea_mays_subsp._mays_   (Maize)   0
Zea_mays_v181   (Maize)   0
Sorghum_bicolor_   (Sorghum)   0
Chlorella_vulgaris_ 0
Volvox_carteri_f._nagariensis_ 0
Ostreococcus_lucimarinus_CCE9901_ 0
Bathycoccus_prasinos_ 0
Micromonas_pusilla_CCMP1545_v3.0 0
Bigelowiella_natans_CCMP2755_22 0
Leishmania_major_strain_Friedlin_ 0
Leishmania_infantum_JPCM5_2.4 0
Trypanosoma_vivax_ 0
Trypanosoma_cruzi_strain_CL_Brener 0
Trypanosoma_congolense_2.4 0
Trypanosoma_brucei_gambiense_v4.1 0
Trypanosoma_brucei_TREU927_v4.1 0
Albugo_laibachii_22 0
Phytophthora_capsici_ 0
Phaeodactylum_tricornutumCCAP_1055/1 0
Fragilariopsis_cylindrus 0
Paramecium_tetraurelia_ 1
Plasmodium_knowlesi_strain_H_ 0
Symbiodinium_minutum_clade_B1_v1.2 1
Naegleria_gruberi_ 0
Trichomonas_vaginalis_ 0
Thermobaculum_terrenum_ATCC_BAA-798 0
Leptolyngbya_sp._PCC_7376 0
Pseudanabaena_sp._PCC_7367 0
Gloeobacter_violaceus_PCC_7421 1
Nostoc_sp._PCC_7524 0
Mycoplasma_wenyonii_str._Massachusetts 1
Conexibacter_woesei_DSM_14684 1
Ilumatobacter_coccineus 0
Catenulispora_acidiphila_DSM_44928 4
Stackebrandtia_nassauensis_DSM_44728 1
Streptosporangium_roseum_DSM_43021 0
Streptomyces_coelicolor_A3(2) 0
Streptomyces_flavogriseus_ATCC_33331 0
Streptomyces_griseus_subsp._griseus_NBRC_13350 0
Streptomyces_bingchenggensis_BCW-1 0
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Streptomyces_scabiei_87.22 0
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 0
Actinosynnema_mirum_DSM_43827 0
Pseudonocardia_dioxanivorans_CB1190 0
Propionibacterium_acnes_SK137 1
Micromonospora_sp._L5 0
Micromonospora_aurantiaca_ATCC_27029 0
Actinoplanes_sp._SE50/110 1
Actinoplanes_missouriensis_431 0
Gordonia_sp._KTR9 0
Intrasporangium_calvum_DSM_43043 1
Cellulomonas_flavigena_DSM_20109 0
Rothia_dentocariosa_ATCC_17931 0
Arthrobacter_sp._Rue61a 0
Anaerolinea_thermophila_UNI-1 0
Thermomicrobium_roseum_DSM_5159 1
Sphaerobacter_thermophilus_DSM_20745 2
Herpetosiphon_aurantiacus_DSM_785 1
Roseiflexus_sp._RS-1 1
Roseiflexus_castenholzii_DSM_13941 0
Chloroflexus_sp._MS-G 0
Chloroflexus_sp._Y-400-fl 0
Chloroflexus_aurantiacus_J-10-fl 0
Truepera_radiovictrix_DSM_17093 1
Clostridium_clariflavum_DSM_19732 1
Eubacterium_siraeum 1
Clostridium_thermocellum_ATCC_27405 0
Thermaerobacter_marianensis_DSM_12885 0
Oscillibacter_valericigenes_Sjm18-20 1
Thermincola_potens_JR 0
Dehalobacter_sp._DCA 0
Dehalobacter_sp._CF 0
Desulfitobacterium_dehalogenans_ATCC_51507 0
Eubacterium_eligens_ATCC_27750 0
Clostridium_phytofermentans_ISDg 2
[Ruminococcus]_torques 0
Eubacterium_rectale_M104/1 0
Alkaliphilus_oremlandii_OhILAs 1
Clostridium_sp._BNL1100 0
Caldicellulosiruptor_kronotskyensis_2002 0
Caldicellulosiruptor_bescii_DSM_6725 0
Thermoanaerobacter_sp._X514 1
Streptococcus_uberis_0140J 1
Exiguobacterium_sp._AT1b 1
Paenibacillus_mucilaginosus_3016 0
Bacillus_halodurans_C-125 1
Bacillus_thuringiensis_str._Al_Hakam 0
Gemmatimonas_aurantiaca_T-27 0
Melioribacter_roseus_P3M 0
Chlorobium_luteolum_DSM_273 1
Chloroherpeton_thalassium_ATCC_35110 0
Haliscomenobacter_hydrossis_DSM_1100 0
Niastella_koreensis_GR20-10 0
Rhodothermus_marinus_DSM_4252 2
Candidatus_Amoebophilus_asiaticus_5a2 1
Belliella_baltica_DSM_15883 1
Marivirga_tractuosa_DSM_4126 0
Leadbetterella_byssophila_DSM_17132 0
Cytophaga_hutchinsonii_ATCC_33406 1
Spirosoma_linguale_DSM_74 0
Tannerella_forsythia_ATCC_43037 1
Odoribacter_splanchnicus_DSM_20712 0
Bacteroides_sp._CF50 0
Prevotella_intermedia_17 0
Alistipes_finegoldii_DSM_17242 1
Bacteroides_fragilis_YCH46 1
Pedobacter_saltans_DSM_12145 0
Solitalea_canadensis_DSM_3403 0
Sphingobacterium_sp._21 0
Fluviicola_taffensis_DSM_16823 1
Zobellia_galactanivorans 0
Polaribacter_sp._MED152 0
Fibrobacter_succinogenes_subsp._succinogenes_S85 1
Isosphaera_pallida_ATCC_43644 0
Rhodopirellula_baltica_SH_1 0
Coraliomargarita_akajimensis_DSM_45221 0
Opitutus_terrae_PB90-1 0
Leptospira_interrogans_serovar_Lai_str._IPAV 0
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 0
Brachyspira_murdochii_DSM_12563 0
Brachyspira_intermedia_PWS/A 0
Brachyspira_pilosicoli_95/1000 1
Brachyspira_hyodysenteriae_WA1 0
Treponema_azotonutricium_ZAS-9 0
Treponema_primitia_ZAS-2 0
Treponema_denticola_ATCC_35405 0
Spirochaeta_thermophila_DSM_6192 0
Thermodesulfatator_indicus_DSM_15286 1
Marinitoga_piezophila_KA3 0
Petrotoga_mobilis_SJ95 0
Mesotoga_prima_MesG1.Ag.4.2 0
Fervidobacterium_pennivorans_DSM_9078 0
Thermotoga_lettingae_TMO 0
Thermotoga_thermarum_DSM_5069 0
Thermotoga_petrophila_RKU-1 0
Thermotoga_neapolitana_DSM_4359 0
Thermotoga_maritima_MSB8 0
Candidatus_Solibacter_usitatus_Ellin6076 1
Granulicella_tundricola_MP5ACTX9 0
Granulicella_mallensis_MP5ACTX8 0
Candidatus_Methylomirabilis_oxyfera 1
Bacteriovorax_marinus_SJ 0
Nautilia_profundicola_AmH 1
Syntrophobacter_fumaroxidans_MPOB 1
Desulfatibacillum_alkenivorans_AK-01 0
Geobacter_daltonii_FRC-32 0
Haliangium_ochraceum_DSM_14365 1
Sorangium_cellulosum_'So_ce_56' 1
Anaeromyxobacter_sp._Fw109-5 1
Stigmatella_aurantiaca_DW4/3-1 2
Corallococcus_coralloides_DSM_2259 0
Myxococcus_xanthus_DK_1622 0
Myxococcus_fulvus_HW-1 1
Methylibium_petroleiphilum_PM1 1
Burkholderia_xenovorans_LB400 0
Cupriavidus_metallidurans_CH34 0
Burkholderia_sp._CCGE1002 0
Burkholderia_thailandensis_E264 0
Burkholderia_pseudomallei_1106a 0
Burkholderia_mallei_SAVP1 0
Burkholderia_cenocepacia_HI2424 0
Burkholderia_multivorans_ATCC_17616 0
Burkholderia_vietnamiensis_G4 0
Burkholderia_gladioli_BSR3 0
Burkholderia_glumae_BGR1 0
Variovorax_paradoxus_S110 0
Acidovorax_citrulli_AAC00-1 0
Achromobacter_xylosoxidans 1
Tistrella_mobilis_KA081020-065 0
Agrobacterium_tumefaciens_str._C58 0
Mesorhizobium_sp._BNC1 1
Teredinibacter_turnerae_T7901 1
Vibrio_fischeri_MJ11 2
Vibrio_cholerae_O395 0
Ferrimonas_balearica_DSM_9799 0
Shewanella_amazonensis_SB2B 0
Marinobacter_adhaerens_HP15 1
Marinobacter_hydrocarbonoclasticus_ATCC_49840 1
Marinobacter_aquaeolei_VT8 1
Kangiella_koreensis_DSM_16069 1
Hahella_chejuensis_KCTC_2396 0
Methylomonas_methanica_MC09 1
Rhodanobacter_denitrificans 0
Xanthomonas_oryzae_pv._oryzae_PXO99A 1
Photorhabdus_asymbiotica 0
Proteus_mirabilis_HI4320 0
Yersinia_pseudotuberculosis_IP_31758 0
Pectobacterium_wasabiae_WPP163 1
Pantoea_vagans_C9-1 0
Erwinia_tasmaniensis_Et1/99 0
Erwinia_billingiae_Eb661 0
Erwinia_pyrifoliae_Ep1/96 0
Erwinia_amylovora_ATCC_49946 0
Shigella_flexneri_5_str._8401 0
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 0
Klebsiella_variicola_At-22 0
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 0
Enterobacter_cloacae_subsp._dissolvens_SDM 0
Pseudomonas_sp._UW4 0
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 0
Pseudomonas_entomophila_L48 0
Pseudomonas_syringae_pv._tomato_str._DC3000 0
Pseudomonas_aeruginosa_UCBPP-PA14 0
Pseudomonas_sp._VLB120 0
Ignisphaera_aggregans_DSM_17230 1
Staphylothermus_marinus_F1 1
Methanosaeta_harundinacea_6Ac 0
Methanohalobium_evestigatum_Z-7303 0
Methanosarcina_acetivorans_C2A 0
Methanosarcina_mazei_Go1 2
Methanosarcina_barkeri_str._Fusaro 0
Methanosphaerula_palustris_E1-9c 0
Methanospirillum_hungatei_JF-1 0
Methanoplanus_petrolearius_DSM_11571 0
Methanoculleus_bourgensis_MS2 0
Thermococcus_sibiricus_MM_739 1
Aciduliprofundum_sp._MAR08-339 1
Aciduliprofundum_boonei_T469 1

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   0
Hordeum_vulgare_22   (Domesticated barley)   1
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0
Synechococcus_sp._JA-2-3B'a(2-13) 0
Oscillatoria_nigro-viridis_PCC_7112 1
Cyanothece_sp._PCC_7424 0
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 1
Stanieria_cyanosphaera_PCC_7437 1
Calothrix_parietina_Calothrix_sp._PCC_6303 0
Streptomyces_albus_J1074 0
Streptomyces_davawensis_JCM_4913 0
Streptomyces_fulvissimus_DSM_40593 0
Streptomyces_venezuelae_ATCC_10712 0
Streptomyces_collinus_Tu_365 0
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 0
Saccharothrix_espanaensis_DSM_44229 0
Amycolatopsis_orientalis_HCCB10007 0
Propionibacterium_acnes_ATCC_11828 0
Propionibacterium_acnes_TypeIA2_P.acn31 1
Propionibacterium_acnes_TypeIA2_P.acn33 0
Propionibacterium_acnes_C1 1
Propionibacterium_acnes_HL096PA1 1
Propionibacterium_acnes_6609 1
Propionibacterium_acnes_266 0
Propionibacterium_acnes_KPA171202 1
Actinoplanes_friuliensis_DSM_7358 1
Corynebacterium_diphtheriae_31A 0
Actinomyces_graevenitzii_C83_ 0
Chthonomonas_calidirosea_T49 0
Eubacterium_siraeum_V10Sc8a 1
Clostridium_thermocellum_DSM_1313 0
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 0
Coprococcus_catus_GD/7 0
Clostridium_botulinum_BKT015925 0
Thermoanaerobacter_sp._X513 1
Carnobacterium_maltaromaticum_LMA28 1
Streptococcus_equi_subsp._zooepidemicus_ATCC_35246 1
Streptococcus_equi_subsp._zooepidemicus_MGCS10565 1
Streptococcus_equi_subsp._zooepidemicus 1
Paenibacillus_mucilaginosus_KNP414 0
Paenibacillus_mucilaginosus_K02 0
Listeria_monocytogenes_M7 0
Listeria_monocytogenes_L99 0
Listeria_monocytogenes_HCC23 0
Bacillus_thuringiensis_serovar_konkukian_str._97-27 0
Bacillus_thuringiensis_serovar_finitimus_YBT-020 0
Bacillus_cereus_FRI-35 0
Bacillus_cereus_E33L 0
Bacillus_cereus_ATCC_10987 0
Echinicola_vietnamensis_DSM_17526 0
Bacteroides_fragilis_638R 1
Bacteroides_fragilis_NCTC_9343 1
Nonlabens_dokdonensis_DSW-6 0
Psychroflexus_torquis_ATCC_700755 0
Fibrobacter_succinogenes_subsp._succinogenes_S85 1
Singulisphaera_acidiphila_DSM_18658 1
Leptospira_interrogans_serovar_Lai_str._56601 0
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 0
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 0
Brachyspira_pilosicoli_WesB 1
Brachyspira_pilosicoli_P43/6/78 1
Treponema_pallidum_subsp._pallidum_str._Nichols 0
Thermotoga_maritima_MSB8 0
Bdellovibrio_bacteriovorus_str._Tiberius 0
Sorangium_cellulosum_So0157-2 0
Myxococcus_stipitatus_DSM_14675 1
Burkholderia_sp._KJ006 0
Burkholderia_pseudomallei_MSHR305 0
Burkholderia_pseudomallei_NCTC_13179 0
Burkholderia_pseudomallei_BPC006 0
Burkholderia_pseudomallei_668 0
Burkholderia_pseudomallei_1710b 0
Burkholderia_pseudomallei_K96243 0
Burkholderia_mallei_NCTC_10229 0
Burkholderia_mallei_NCTC_10247 0
Burkholderia_mallei_ATCC_23344 0
Burkholderia_ambifaria_MC40-6 0
Burkholderia_cenocepacia_MC0-3 0
Burkholderia_multivorans_ATCC_17616 0
Burkholderia_cepacia_GG4 0
Variovorax_paradoxus_B4 0
Variovorax_paradoxus_EPS 0
Paracoccus_aminophilus_JCM_7686 0
Gluconobacter_oxydans_H24 0
Bradyrhizobium_japonicum_USDA_6 0
Simiduia_agarivorans_SA1_=_DSM_21679 0
Vibrio_fischeri_ES114 1
Vibrio_cholerae_M66-2 0
Vibrio_cholerae_O395 0
Vibrio_cholerae_IEC224 0
Vibrio_cholerae_O1_str._2010EL-1786 0
Vibrio_cholerae_MJ-1236 0
Alteromonas_macleodii_ATCC_27126 0
Stenotrophomonas_maltophilia_R551-3 1
Xanthomonas_oryzae_pv._oryzicola_BLS256 0
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 1
Xanthomonas_oryzae_pv._oryzae_KACC_10331 1
Thioalkalivibrio_nitratireducens_DSM_14787 0
Dickeya_dadantii_3937 0
Pantoea_ananatis_LMG_5342 0
Pantoea_ananatis_PA13 0
Pantoea_ananatis_AJ13355 0
Erwinia_pyrifoliae_DSM_12163 0
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 0
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 0
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 1
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 0
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 0
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 1
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 0
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 0
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 0
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 0
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 1
Escherichia_coli_BL21(DE3) 0
Escherichia_coli_BL21(DE3) 0
Escherichia_coli_SE11 0
Escherichia_coli_O55:H7_str._RM12579 0
Escherichia_coli_O26:H11_str._11368 1
Escherichia_coli_B_str._REL606 0
Enterobacter_cloacae_subsp._cloacae_ENHKU01 0
Pseudomonas_putida_NBRC_14164 0
Pseudomonas_putida_DOT-T1E 1
Pseudomonas_poae_RE*1-1-14 0
Pseudomonas_fluorescens_F113 0
Pseudomonas_fluorescens_A506 0
Pseudomonas_fluorescens_R124 0
Pseudomonas_fluorescens_Pf0-1 0
Pseudomonas_aeruginosa_SCV20265 0
Pseudomonas_aeruginosa_MTB-1 0
Pseudomonas_aeruginosa_RP73 0
Pseudomonas_aeruginosa_B136-33 0
Pseudomonas_aeruginosa_DK2 0
Pseudomonas_aeruginosa_NCGM2.S1 0
Pseudomonas_aeruginosa_M18 0
Pseudomonas_aeruginosa_PA7 0
Pseudomonas_aeruginosa_PAO1 0
Methanomethylovorans_hollandica_DSM_15978 0
Methanolobus_psychrophilus_R15 0
Methanosarcina_mazei_Tuc01 0
Methanoregula_formicica_Methanoregula_formicicum_SMSP 0

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Longest transcript per gene
Genome     Number
Arabidopsis_thaliana_10   (Thale cress)   0

Others
Genome     Number
Loa_loa_v3.3_(Request)   (Eye worm)   0
Lotus_japonicus__(Early_assembly) 0
Ricinus_communis__(Early_assembly)   (Castor bean)   0
Nicotiana_benthamiana_0.4.4_(Early_draft) 0
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   0
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   0
NCBI_plasmid_sequences_(Plasmids) 2
Protozoadb_2010_08_(Protozoadb) 0
TargetDB__(Targets) 7
Protein_Data_Bank_(all_PDB_sequenc) 4
STRING_v9.0.5_(STRING) 57
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 4
Uniprot_2018_03_genome 3645
NCBI_2017_08_genome 2554
NCBI_viral_sequences_(Viral) 0

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