SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 75399,75399,_gap_,75399,75399,_gap_,75399,_gap_,46966,_gap_,46966,46966,_gap_,46966,_gap_,46966,46966,46966,_gap_,46966,_gap_,46966,_gap_,46966,_gap_,46966,46966,46966,46966,46966,46966,46966,_gap_,46966,46966,46966,_gap_,47473,143575,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

75399 - Plakin repeat
75399 - Plakin repeat
75399 - Plakin repeat
75399 - Plakin repeat
75399 - Plakin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
47473 - EF-hand
143575 - GAS2 domain-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Erinaceus_europaeus_76   (Western European hedgehog)   1

Longest transcript per gene
Genome     Number
Erinaceus_europaeus_69   (Western European hedgehog)   1