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Domain combinations for 81383,101908 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

81383 - F-box domain
101908 - Putative isomerase YbhE

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   1
Takifugu_rubripes_76_4   (Torafugu)   1
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   0
Monosiga_brevicollis_ 0
Wallemia_sebi_v1.0 1
Paxillus_rubicundulus_Ve08.2h10_v1.0 1
Hebeloma_cylindrosporum_h7_v2.0 4
Tulasnella_calospora_AL13/4D_v1.0 0
Trichoderma_virens_Gv29-8_ 0
Trichoderma_longibrachiatum_ATCC_18648_v1.0 0
Zasmidium_cellare_ATCC_36951_v1.0 0
Dothistroma_septosporum 0
Aspergillus_terreus_NIH2624_ 0
Yarrowia_lipolytica_CLIB122 0
Spizellomyces_punctatus_DAOM_BR117_ 1
Eucalyptus_grandis_v201   (Rose gum)   1
Prunus_persica_v139   (Peach)   1
Mimulus_guttatus_v140   (Spotted monkey flower)   1
Brachypodium_distachyon_   (Stiff brome)   1
Oryza_glumaepatula_22 0
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   0
Oryza_sativa_v193   (Rice)   0
Setaria_italica_v164   (Foxtail millet)   2

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Strains
Genome     Number
Histoplasma_capsulatum_H88 0
Batrachochytrium_dendrobatidis_JAM81_ 0

Longest transcript per gene
Genome     Number
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   1
Takifugu_rubripes_69_4   (Torafugu)   1
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   0

Others
Genome     Number
STRING_v9.0.5_(STRING) 3
NCBI_2017_08_genome 13
Uniprot_2018_03_genome 81

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