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Domain combinations for 81383,_gap_,110069 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

81383 - F-box domain
110069 - ApaG-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Ochotona_princeps_76   (American pika)   0
Capsaspora_owczarzaki_ATCC_30864_ 1
Dictyostelium_discoideum 1
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   1
Arabidopsis_lyrata_   (Lyrate rockcress)   1
Linum_usitatissimum_v200   (Flax)   1
Aquilegia_coerulea_v195 4
Oryza_barthii_22   (African wild rice)   1
Oryza_meridionalis_22 1
Oryza_glumaepatula_22 1
Oryza_glaberrima   (African rice)   1
Oryza_punctata_22 1
Oryza_nivara_22 1
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   2
Oryza_sativa_v193   (Rice)   2
Musa_acuminata_22   (Wild Malaysian banana)   1
Chlorella_variabilis_sp._NC64A_ 1
Volvox_carteri_f._nagariensis_ 1
Volvox_carteri_v199 1
Chlamydomonas_reinhardtii_4.0 1
Micromonas_sp._RCC299_ 1
Micromonas_pusilla_CCMP1545_v3.0 1
Thecamonas_trahens_ATCC_50062_ 1
Tetrahymena_thermophila_SB210_1_ 1
Naegleria_gruberi_ 1

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Strains
Genome     Number
Batrachochytrium_dendrobatidis_JEL423_ 1
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   1

Longest transcript per gene
Genome     Number
Ochotona_princeps_69   (American pika)   0

Others
Genome     Number
STRING_v9.0.5_(STRING) 5
NCBI_2017_08_genome 25
Uniprot_2018_03_genome 258

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